RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 MYOCDQ8IZQ8 938 aa28.88■■■□□ 2.21
VEGFA-208ENST00000417285 AGXT2Q9BYV1 514 aa28.88■■■□□ 2.21
VEGFA-208ENST00000417285 AGO4Q9HCK5 861 aaKnown RBP28.88■■■□□ 2.21
VEGFA-208ENST00000417285 C6orf50Q9HD87 102 aa28.88■■■□□ 2.21
VEGFA-208ENST00000417285 TUBE1Q9UJT0 475 aa28.88■■■□□ 2.21
VEGFA-208ENST00000417285 LINC01553A4QN01 128 aa28.87■■■□□ 2.21
VEGFA-208ENST00000417285 CHRNA1P02708 482 aa28.87■■■□□ 2.21
VEGFA-208ENST00000417285 ACTR2P61160 394 aa28.87■■■□□ 2.21
VEGFA-208ENST00000417285 HTRA4P83105 476 aaPredicted RBP28.87■■■□□ 2.21
VEGFA-208ENST00000417285 GRB10Q13322 594 aa28.87■■■□□ 2.21
VEGFA-208ENST00000417285 AAK1Q2M2I8 961 aa28.87■■■□□ 2.21
VEGFA-208ENST00000417285 TOP1MTQ969P6 601 aa28.87■■■□□ 2.21
VEGFA-208ENST00000417285 PGBD1Q96JS3 809 aa28.87■■■□□ 2.21
VEGFA-208ENST00000417285 ZMYND12Q9H0C1 365 aa28.87■■■□□ 2.21
VEGFA-208ENST00000417285 TMEM260Q9NX78 707 aa28.87■■■□□ 2.21
VEGFA-208ENST00000417285 NID2Q14112 1375 aa28.87■■■□□ 2.21
VEGFA-208ENST00000417285 PRRC2BQ5JSZ5 2229 aaKnown RBP28.86■■■□□ 2.21
VEGFA-208ENST00000417285 AKAP17AQ02040 695 aaKnown RBP28.86■■■□□ 2.21
VEGFA-208ENST00000417285 MARCH8Q5T0T0 291 aa28.86■■■□□ 2.21
VEGFA-208ENST00000417285 RUFY4Q6ZNE9 571 aa28.86■■■□□ 2.21
VEGFA-208ENST00000417285 PCYT2Q99447 389 aa28.86■■■□□ 2.21
VEGFA-208ENST00000417285 IFIH1Q9BYX4 1025 aaKnown RBP28.86■■■□□ 2.21
VEGFA-208ENST00000417285 LPXNO60711 386 aa28.85■■■□□ 2.21
VEGFA-208ENST00000417285 CYP3A4P08684 503 aa28.85■■■□□ 2.21
VEGFA-208ENST00000417285 INSRRP14616 1297 aa28.85■■■□□ 2.21
VEGFA-208ENST00000417285 GNA11P29992 359 aa28.85■■■□□ 2.21
VEGFA-208ENST00000417285 SLC26A2P50443 739 aa28.85■■■□□ 2.21
VEGFA-208ENST00000417285 STAT5BP51692 787 aa28.85■■■□□ 2.21
VEGFA-208ENST00000417285 EVCP57679 992 aa28.85■■■□□ 2.21
VEGFA-208ENST00000417285 SKIV2LQ15477 1246 aaKnown RBP28.85■■■□□ 2.21
VEGFA-208ENST00000417285 JAKMIP3Q5VZ66 844 aa28.85■■■□□ 2.21
VEGFA-208ENST00000417285 IL27Q8NEV9 243 aa28.85■■■□□ 2.21
VEGFA-208ENST00000417285 BDP1A6H8Y1 2624 aa28.85■■■□□ 2.21
VEGFA-208ENST00000417285 DOCK5Q9H7D0 1870 aa28.85■■■□□ 2.21
VEGFA-208ENST00000417285 ATG7O95352 703 aa28.84■■■□□ 2.21
VEGFA-208ENST00000417285 ITGB3BPQ13352 177 aaPredicted RBP28.84■■■□□ 2.21
VEGFA-208ENST00000417285 SP7Q8TDD2 431 aaPredicted RBP28.84■■■□□ 2.21
VEGFA-208ENST00000417285 OSBPL7Q9BZF2 842 aa28.84■■■□□ 2.21
VEGFA-208ENST00000417285 COG5Q9UP83 839 aa28.84■■■□□ 2.21
VEGFA-208ENST00000417285 PKN1Q16512 942 aa28.83■■■□□ 2.21
VEGFA-208ENST00000417285 IER5Q5VY09 327 aa28.83■■■□□ 2.21
VEGFA-208ENST00000417285 RUFY3Q7L099 469 aa28.83■■■□□ 2.21
VEGFA-208ENST00000417285 BICD2Q8TD16 824 aa28.83■■■□□ 2.21
VEGFA-208ENST00000417285 DNAJB3Q8WWF6 145 aa28.83■■■□□ 2.21
VEGFA-208ENST00000417285 SUGCTQ9HAC7 445 aa28.83■■■□□ 2.21
VEGFA-208ENST00000417285 TRPC6Q9Y210 931 aa28.83■■■□□ 2.21
VEGFA-208ENST00000417285 KAT6AQ92794 2004 aa28.82■■■□□ 2.2
VEGFA-208ENST00000417285 NCOR1O75376 2440 aa28.82■■■□□ 2.2
VEGFA-208ENST00000417285 IGBP1P78318 339 aa28.82■■■□□ 2.2
VEGFA-208ENST00000417285 SPRED2Q7Z698 418 aa28.82■■■□□ 2.2
VEGFA-208ENST00000417285 PLA2G4DQ86XP0 818 aa28.82■■■□□ 2.2
VEGFA-208ENST00000417285 REXO1Q8N1G1 1221 aaKnown RBP28.82■■■□□ 2.2
VEGFA-208ENST00000417285 CRYGNQ8WXF5 182 aa28.82■■■□□ 2.2
VEGFA-208ENST00000417285 SAMD11Q96NU1 681 aa28.82■■■□□ 2.2
VEGFA-208ENST00000417285 RNF26Q9BY78 433 aaPredicted RBP28.82■■■□□ 2.2
VEGFA-208ENST00000417285 REV3LO60673 3130 aa28.82■■■□□ 2.2
VEGFA-208ENST00000417285 SPTBN5Q9NRC6 3674 aaKnown RBP28.82■■■□□ 2.2
VEGFA-208ENST00000417285 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.81■■■□□ 2.2
VEGFA-208ENST00000417285 FAM86B1E9PN63 330 aa28.81■■■□□ 2.2
VEGFA-208ENST00000417285 FAM86B2P0C5J1 330 aa28.81■■■□□ 2.2
VEGFA-208ENST00000417285 IFNAR1P17181 557 aa28.81■■■□□ 2.2
VEGFA-208ENST00000417285 MGAT3Q09327 533 aa28.81■■■□□ 2.2
VEGFA-208ENST00000417285 PLCB4Q15147 1175 aa28.81■■■□□ 2.2
VEGFA-208ENST00000417285 KRT40Q6A162 431 aa28.81■■■□□ 2.2
VEGFA-208ENST00000417285 YME1L1Q96TA2 773 aa28.81■■■□□ 2.2
VEGFA-208ENST00000417285 ZSWIM6Q9HCJ5 1215 aa28.81■■■□□ 2.2
VEGFA-208ENST00000417285 MTUS1Q9ULD2 1270 aa28.81■■■□□ 2.2
VEGFA-208ENST00000417285 PCDHA2Q9Y5H9 948 aa28.81■■■□□ 2.2
VEGFA-208ENST00000417285 CYP46A1Q9Y6A2 500 aa28.81■■■□□ 2.2
VEGFA-208ENST00000417285 SQORQ9Y6N5 450 aa28.81■■■□□ 2.2
VEGFA-208ENST00000417285 IGKV6D-21A0A0A0MT36 114 aa28.8■■■□□ 2.2
VEGFA-208ENST00000417285 POTEB3A0JP26 581 aa28.8■■■□□ 2.2
VEGFA-208ENST00000417285 UPP2O95045 317 aa28.8■■■□□ 2.2
VEGFA-208ENST00000417285 GHRP10912 638 aa28.8■■■□□ 2.2
VEGFA-208ENST00000417285 PDIA3P30101 505 aaKnown RBP28.8■■■□□ 2.2
VEGFA-208ENST00000417285 LPIN1Q14693 890 aa28.8■■■□□ 2.2
VEGFA-208ENST00000417285 NTRK3Q16288 839 aa28.8■■■□□ 2.2
VEGFA-208ENST00000417285 FAM160B1Q5W0V3 765 aa28.8■■■□□ 2.2
VEGFA-208ENST00000417285 POTEBQ6S5H4 581 aa28.8■■■□□ 2.2
VEGFA-208ENST00000417285 NME8Q8N427 588 aa28.8■■■□□ 2.2
VEGFA-208ENST00000417285 PHKBQ93100 1093 aa28.8■■■□□ 2.2
VEGFA-208ENST00000417285 TBC1D22BQ9NU19 505 aa28.8■■■□□ 2.2
VEGFA-208ENST00000417285 IPO5O00410 1097 aaKnown RBP28.79■■■□□ 2.2
VEGFA-208ENST00000417285 MRPS6P82932 125 aaKnown RBP28.79■■■□□ 2.2
VEGFA-208ENST00000417285 FBXO47Q5MNV8 452 aa28.79■■■□□ 2.2
VEGFA-208ENST00000417285 ABHD15Q6UXT9 468 aa28.79■■■□□ 2.2
VEGFA-208ENST00000417285 CCDC148Q8NFR7 591 aa28.79■■■□□ 2.2
VEGFA-208ENST00000417285 TM6SF1Q9BZW5 370 aa28.79■■■□□ 2.2
VEGFA-208ENST00000417285 CDY2AQ9Y6F7 541 aa28.79■■■□□ 2.2
VEGFA-208ENST00000417285 PTPRSQ13332 1948 aa28.79■■■□□ 2.2
VEGFA-208ENST00000417285 IGLV3-22A0A075B6J6 115 aa28.78■■■□□ 2.2
VEGFA-208ENST00000417285 M0QZ92 97 aa28.78■■■□□ 2.2
VEGFA-208ENST00000417285 TNFRSF10AO00220 468 aa28.78■■■□□ 2.2
VEGFA-208ENST00000417285 BACH1O14867 736 aa28.78■■■□□ 2.2
VEGFA-208ENST00000417285 DHX15O43143 795 aaKnown RBP28.78■■■□□ 2.2
VEGFA-208ENST00000417285 CCNE2O96020 404 aa28.78■■■□□ 2.2
VEGFA-208ENST00000417285 SETQ01105 290 aaPredicted RBP28.78■■■□□ 2.2
VEGFA-208ENST00000417285 MIS18BP1Q6P0N0 1132 aa28.78■■■□□ 2.2
VEGFA-208ENST00000417285 TSHZ1Q6ZSZ6 1077 aa28.78■■■□□ 2.2
VEGFA-208ENST00000417285 FAM43BQ6ZT52 329 aaPredicted RBP28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms