RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 CNOT6LQ96LI5 555 aaKnown RBP11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 THAP9Q9H5L6 903 aa11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 TCEAL9Q9UHQ7 104 aa11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 MYPNQ86TC9 1320 aa11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 GJA5P36382 358 aa11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 PPP1R2P41236 205 aa11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 MTIF2P46199 727 aaKnown RBP11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 HERVK_113P62684 666 aa11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 PPIL2Q13356 520 aa11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 PROCA1Q8NCQ7 364 aaPredicted RBP11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 SLC10A4Q96EP9 437 aa11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 GTPBP4Q9BZE4 634 aaKnown RBP11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 TRMT1Q9NXH9 659 aaKnown RBP11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 PCDHA2Q9Y5H9 948 aa11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 LOXHD1Q8IVV2 1947 aa11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 TMEM150BA6NC51 233 aa11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 USP27XA6NNY8 438 aa11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 B4DLN1 442 aa11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 CXCL11O14625 94 aa11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 TBCAO75347 108 aaKnown RBP11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 RGS20O76081 388 aa11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 HOXA7P31268 230 aaPredicted RBP11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 TBX2Q13207 712 aaPredicted RBP11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 NACC1Q96RE7 527 aa11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 TUBGCP2Q9BSJ2 902 aa11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 SPATC1LQ9H0A9 340 aa11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 RRAGCQ9HB90 399 aa11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 TELO2Q9Y4R8 837 aa11.84□□□□□ -0.51
SMPD4P1-201ENST00000416717 ZNFX1Q9P2E3 1918 aaKnown RBP11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 ZC3H4Q9UPT8 1303 aaKnown RBP11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 MCM3APO60318 1980 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 MYH9P35579 1960 aaKnown RBP11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 LRRC10BA6NIK2 292 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 CCNE2O96020 404 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 EEF1GP26641 437 aaKnown RBP11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 RBL2Q08999 1139 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 UGCGQ16739 394 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 COBLL1Q53SF7 1204 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 WDR78Q5VTH9 848 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 PPFIBP1Q86W92 1011 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 SCFD1Q8WVM8 642 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 MRPL44Q9H9J2 332 aaKnown RBP11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 TXNRD2Q9NNW7 524 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 TBC1D22BQ9NU19 505 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 AGTPBP1Q9UPW5 1226 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 KCNH4Q9UQ05 1017 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 A0A0G2JMZ2 1700 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 ASTN1O14525 1302 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 FRMD3A2A2Y4 597 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 PRPF6O94906 941 aaKnown RBP11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 FAM13AO94988 1023 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 MYBP10242 640 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 PBX1P40424 430 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 C1orf186Q6ZWK4 172 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 NLRX1Q86UT6 975 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 MYCT1Q8N699 235 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 TC2NQ8N9U0 490 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 CHST13Q8NET6 341 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 ZNF526Q8TF50 670 aaPredicted RBP11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 NOC3LQ8WTT2 800 aaKnown RBP11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 C16orf45Q96MC5 204 aaPredicted RBP11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 TSG101Q99816 390 aa11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 MOV10L1Q9BXT6 1211 aaKnown RBP11.83□□□□□ -0.52
SMPD4P1-201ENST00000416717 ARHGEF35A5YM69 484 aa11.82□□□□□ -0.52
SMPD4P1-201ENST00000416717 GCNT3O95395 438 aa11.82□□□□□ -0.52
SMPD4P1-201ENST00000416717 P4HBP07237 508 aaKnown RBP11.82□□□□□ -0.52
SMPD4P1-201ENST00000416717 CASP14P31944 242 aa11.82□□□□□ -0.52
SMPD4P1-201ENST00000416717 MOGSQ13724 837 aa11.82□□□□□ -0.52
SMPD4P1-201ENST00000416717 Q3C1V9 767 aa11.82□□□□□ -0.52
SMPD4P1-201ENST00000416717 UTP14CQ5TAP6 766 aaKnown RBP11.82□□□□□ -0.52
SMPD4P1-201ENST00000416717 RIOX2Q8IUF8 465 aa11.82□□□□□ -0.52
SMPD4P1-201ENST00000416717 MB21D1Q8N884 522 aa11.82□□□□□ -0.52
SMPD4P1-201ENST00000416717 NOC4LQ9BVI4 516 aaKnown RBP11.82□□□□□ -0.52
SMPD4P1-201ENST00000416717 SPTLC3Q9NUV7 552 aa11.82□□□□□ -0.52
SMPD4P1-201ENST00000416717 LGALS16A8MUM7 142 aa11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 NRDCO43847 1150 aa11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 OFD1O75665 1012 aa11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 CNMDO75829 334 aa11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 PGK2P07205 417 aa11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 CYP2C8P10632 490 aa11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 NMT1P30419 496 aaKnown RBP11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 QARSP47897 775 aaKnown RBP11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 LDLRAD1Q5T700 205 aa11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 SEPT14Q6ZU15 432 aa11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 EEPD1Q7L9B9 569 aa11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 FAM114A1Q8IWE2 563 aa11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 INPP4AQ96PE3 977 aaPredicted RBP11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 IKZF4Q9H2S9 585 aa11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 ZSWIM4Q9H7M6 989 aa11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 RBPJLQ9UBG7 517 aa11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 COL4A3BPQ9Y5P4 624 aa11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 WDR64B1ANS9 1081 aa11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 AKR1B15C9JRZ8 316 aaPredicted RBP11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 POTEB2H3BUK9 544 aa11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 RNF225M0QZC1 329 aaPredicted RBP11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 GYPCP04921 128 aa11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 KLK7P49862 253 aa11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 FXR1P51114 621 aaKnown RBP eCLIP11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 LRRC63Q05C16 580 aa11.81□□□□□ -0.52
SMPD4P1-201ENST00000416717 KCNA1Q09470 495 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms