RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 TMEM59LQ9UK28 342 aa6.96□□□□□ -1.3
CSTF1-202ENST00000415828 MRVI1Q9Y6F6 885 aa6.96□□□□□ -1.3
CSTF1-202ENST00000415828 TRIOO75962 3097 aa6.96□□□□□ -1.3
CSTF1-202ENST00000415828 C9IYK1 514 aa6.95□□□□□ -1.3
CSTF1-202ENST00000415828 MEIS1O00470 390 aa6.95□□□□□ -1.3
CSTF1-202ENST00000415828 TP53P04637 393 aaPredicted RBP6.95□□□□□ -1.3
CSTF1-202ENST00000415828 SRFP11831 508 aa6.95□□□□□ -1.3
CSTF1-202ENST00000415828 RAC2P15153 192 aa6.95□□□□□ -1.3
CSTF1-202ENST00000415828 DNAJA1P31689 397 aaKnown RBP6.95□□□□□ -1.3
CSTF1-202ENST00000415828 GMPSP49915 693 aaPredicted RBP6.95□□□□□ -1.3
CSTF1-202ENST00000415828 EGR3Q06889 387 aa6.95□□□□□ -1.3
CSTF1-202ENST00000415828 OR6P1Q8NGX9 317 aa6.95□□□□□ -1.3
CSTF1-202ENST00000415828 ABHD4Q8TB40 342 aa6.95□□□□□ -1.3
CSTF1-202ENST00000415828 CDX2Q99626 313 aaPredicted RBP6.95□□□□□ -1.3
CSTF1-202ENST00000415828 TINF2Q9BSI4 451 aa6.95□□□□□ -1.3
CSTF1-202ENST00000415828 PRDM14Q9GZV8 571 aa6.95□□□□□ -1.3
CSTF1-202ENST00000415828 IGSF5Q9NSI5 407 aa6.95□□□□□ -1.3
CSTF1-202ENST00000415828 NARFQ9UHQ1 456 aa6.95□□□□□ -1.3
CSTF1-202ENST00000415828 STRIP2Q9ULQ0 834 aa6.95□□□□□ -1.3
CSTF1-202ENST00000415828 PCDHB12Q9Y5F1 795 aa6.95□□□□□ -1.3
CSTF1-202ENST00000415828 PCDHA11Q9Y5I1 949 aa6.95□□□□□ -1.3
CSTF1-202ENST00000415828 NR2E3Q9Y5X4 410 aa6.95□□□□□ -1.3
CSTF1-202ENST00000415828 SOS1Q07889 1333 aaPredicted RBP6.95□□□□□ -1.3
CSTF1-202ENST00000415828 BMP8BP34820 402 aa6.94□□□□□ -1.3
CSTF1-202ENST00000415828 PMS1P54277 932 aaKnown RBP6.94□□□□□ -1.3
CSTF1-202ENST00000415828 ARID5AQ03989 594 aa6.94□□□□□ -1.3
CSTF1-202ENST00000415828 AUHQ13825 339 aaKnown RBP6.94□□□□□ -1.3
CSTF1-202ENST00000415828 TBC1D9BQ66K14 1250 aa6.94□□□□□ -1.3
CSTF1-202ENST00000415828 PPFIBP1Q86W92 1011 aa6.94□□□□□ -1.3
CSTF1-202ENST00000415828 USP38Q8NB14 1042 aa6.94□□□□□ -1.3
CSTF1-202ENST00000415828 MASTLQ96GX5 879 aa6.94□□□□□ -1.3
CSTF1-202ENST00000415828 DIRC2Q96SL1 478 aa6.94□□□□□ -1.3
CSTF1-202ENST00000415828 GFOD1Q9NXC2 390 aa6.94□□□□□ -1.3
CSTF1-202ENST00000415828 PTCH2Q9Y6C5 1203 aa6.94□□□□□ -1.3
CSTF1-202ENST00000415828 SSC5DA1L4H1 1573 aa6.94□□□□□ -1.3
CSTF1-202ENST00000415828 COL15A1P39059 1388 aa6.94□□□□□ -1.3
CSTF1-202ENST00000415828 SBNO2Q9Y2G9 1366 aa6.94□□□□□ -1.3
CSTF1-202ENST00000415828 A0A1W2PQH9 124 aa6.93□□□□□ -1.3
CSTF1-202ENST00000415828 PRAMEF1O95521 474 aa6.93□□□□□ -1.3
CSTF1-202ENST00000415828 SLC9C1Q4G0N8 1177 aa6.93□□□□□ -1.3
CSTF1-202ENST00000415828 KRT26Q7Z3Y9 468 aa6.93□□□□□ -1.3
CSTF1-202ENST00000415828 SH3TC2Q8TF17 1288 aa6.93□□□□□ -1.3
CSTF1-202ENST00000415828 MYLIPQ8WY64 445 aa6.93□□□□□ -1.3
CSTF1-202ENST00000415828 NSUN3Q9H649 340 aaKnown RBP6.93□□□□□ -1.3
CSTF1-202ENST00000415828 KCNK12Q9HB15 430 aa6.93□□□□□ -1.3
CSTF1-202ENST00000415828 PCDHB10Q9UN67 800 aa6.93□□□□□ -1.3
CSTF1-202ENST00000415828 MINPP1Q9UNW1 487 aa6.93□□□□□ -1.3
CSTF1-202ENST00000415828 SLC12A7Q9Y666 1083 aa6.93□□□□□ -1.3
CSTF1-202ENST00000415828 MYO15AQ9UKN7 3530 aa6.92□□□□□ -1.3
CSTF1-202ENST00000415828 SSU72P8A0A1W2PR75 194 aa6.92□□□□□ -1.3
CSTF1-202ENST00000415828 BBS9Q3SYG4 887 aa6.92□□□□□ -1.3
CSTF1-202ENST00000415828 GNPTABQ3T906 1256 aa6.92□□□□□ -1.3
CSTF1-202ENST00000415828 DCAF15Q66K64 600 aa6.92□□□□□ -1.3
CSTF1-202ENST00000415828 SYDE1Q6ZW31 735 aaPredicted RBP6.92□□□□□ -1.3
CSTF1-202ENST00000415828 RTKN2Q8IZC4 609 aa6.92□□□□□ -1.3
CSTF1-202ENST00000415828 TDHQ8IZJ6 230 aa6.92□□□□□ -1.3
CSTF1-202ENST00000415828 FAM169BQ8N8A8 192 aa6.92□□□□□ -1.3
CSTF1-202ENST00000415828 BHLHE22Q8NFJ8 381 aaPredicted RBP6.92□□□□□ -1.3
CSTF1-202ENST00000415828 SYTL5Q8TDW5 730 aaPredicted RBP6.92□□□□□ -1.3
CSTF1-202ENST00000415828 HTATIP2Q9BUP3 242 aa6.92□□□□□ -1.3
CSTF1-202ENST00000415828 HDAC8Q9BY41 377 aa6.92□□□□□ -1.3
CSTF1-202ENST00000415828 CHST7Q9NS84 486 aa6.92□□□□□ -1.3
CSTF1-202ENST00000415828 COL2A1P02458 1487 aaPredicted RBP6.92□□□□□ -1.3
CSTF1-202ENST00000415828 CHD9Q3L8U1 2897 aa6.91□□□□□ -1.3
CSTF1-202ENST00000415828 SIGLEC6O43699 453 aa6.91□□□□□ -1.3
CSTF1-202ENST00000415828 HPXP02790 462 aa6.91□□□□□ -1.3
CSTF1-202ENST00000415828 TRHRP34981 398 aaPredicted RBP6.91□□□□□ -1.3
CSTF1-202ENST00000415828 RAP1GAPP47736 663 aa6.91□□□□□ -1.3
CSTF1-202ENST00000415828 CXCL9Q07325 125 aa6.91□□□□□ -1.3
CSTF1-202ENST00000415828 AXDND1Q5T1B0 1012 aaPredicted RBP6.91□□□□□ -1.3
CSTF1-202ENST00000415828 C7orf61Q8IZ16 206 aa6.91□□□□□ -1.3
CSTF1-202ENST00000415828 C19orf47Q8N9M1 422 aaKnown RBP6.91□□□□□ -1.3
CSTF1-202ENST00000415828 ENOX1Q8TC92 643 aaKnown RBP6.91□□□□□ -1.3
CSTF1-202ENST00000415828 TCTN2Q96GX1 697 aa6.91□□□□□ -1.3
CSTF1-202ENST00000415828 DSCC1Q9BVC3 393 aa6.91□□□□□ -1.3
CSTF1-202ENST00000415828 ZNF214Q9UL59 606 aaPredicted RBP6.91□□□□□ -1.3
CSTF1-202ENST00000415828 NPC1L1Q9UHC9 1359 aa6.91□□□□□ -1.3
CSTF1-202ENST00000415828 MGAMO43451 1857 aa6.9□□□□□ -1.3
CSTF1-202ENST00000415828 SMAD7O15105 426 aaKnown RBP6.9□□□□□ -1.3
CSTF1-202ENST00000415828 SYPP08247 313 aa6.9□□□□□ -1.3
CSTF1-202ENST00000415828 ZGLP1P0C6A0 271 aa6.9□□□□□ -1.3
CSTF1-202ENST00000415828 AMPHP49418 695 aa6.9□□□□□ -1.3
CSTF1-202ENST00000415828 SLC7A5Q01650 507 aa6.9□□□□□ -1.3
CSTF1-202ENST00000415828 NOL9Q5SY16 702 aaKnown RBP6.9□□□□□ -1.3
CSTF1-202ENST00000415828 FAM109BQ6ICB4 259 aaPredicted RBP6.9□□□□□ -1.3
CSTF1-202ENST00000415828 ZNF655Q8N720 491 aaPredicted RBP6.9□□□□□ -1.3
CSTF1-202ENST00000415828 DAGLBQ8NCG7 672 aa6.9□□□□□ -1.3
CSTF1-202ENST00000415828 PPP1R16BQ96T49 567 aa6.9□□□□□ -1.3
CSTF1-202ENST00000415828 PSMD1Q99460 953 aa6.9□□□□□ -1.3
CSTF1-202ENST00000415828 C1QTNF1Q9BXJ1 281 aa6.9□□□□□ -1.3
CSTF1-202ENST00000415828 FOXP3Q9BZS1 431 aa6.9□□□□□ -1.3
CSTF1-202ENST00000415828 EPHX3Q9H6B9 360 aa6.9□□□□□ -1.3
CSTF1-202ENST00000415828 PHAXQ9H814 394 aaKnown RBP6.9□□□□□ -1.3
CSTF1-202ENST00000415828 ZMYND8Q9ULU4 1186 aaPredicted RBP6.9□□□□□ -1.3
CSTF1-202ENST00000415828 ASTN2O75129 1339 aaPredicted RBP6.9□□□□□ -1.3
CSTF1-202ENST00000415828 CENPJQ9HC77 1338 aaPredicted RBP6.9□□□□□ -1.3
CSTF1-202ENST00000415828 DMXL1Q9Y485 3027 aa6.89□□□□□ -1.31
CSTF1-202ENST00000415828 UBE2Q2LH0YL09 131 aa6.89□□□□□ -1.31
CSTF1-202ENST00000415828 FGRP09769 529 aa6.89□□□□□ -1.31
CSTF1-202ENST00000415828 PHKG2P15735 406 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms