RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 SLC39A5Q6ZMH5 540 aa11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 DTHD1Q6ZMT9 781 aa11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 CCDC60Q8IWA6 550 aaPredicted RBP11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 C7orf31Q8N865 590 aa11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 C4orf32Q8N8J7 132 aa11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 KAT2BQ92831 832 aa11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 PCYT2Q99447 389 aa11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 C16orf70Q9BSU1 422 aa11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 KATNAL1Q9BW62 490 aa11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 SMARCAD1Q9H4L7 1026 aa11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 TUT1Q9H6E5 874 aaKnown RBP11.74□□□□□ -0.53
HLA-DMB-257ENST00000414017 LAD1O00515 517 aa11.73□□□□□ -0.53
HLA-DMB-257ENST00000414017 BMP15O95972 392 aa11.73□□□□□ -0.53
HLA-DMB-257ENST00000414017 COL6A1P12109 1028 aa11.73□□□□□ -0.53
HLA-DMB-257ENST00000414017 RTP1P59025 263 aa11.73□□□□□ -0.53
HLA-DMB-257ENST00000414017 ATP2C1P98194 919 aaPredicted RBP11.73□□□□□ -0.53
HLA-DMB-257ENST00000414017 PPP2R5CQ13362 524 aa11.73□□□□□ -0.53
HLA-DMB-257ENST00000414017 CTTNQ14247 550 aaKnown RBP11.73□□□□□ -0.53
HLA-DMB-257ENST00000414017 UGCGQ16739 394 aa11.73□□□□□ -0.53
HLA-DMB-257ENST00000414017 LRRC26Q2I0M4 334 aa11.73□□□□□ -0.53
HLA-DMB-257ENST00000414017 TRIM60Q495X7 471 aa11.73□□□□□ -0.53
HLA-DMB-257ENST00000414017 TPH2Q8IWU9 490 aa11.73□□□□□ -0.53
HLA-DMB-257ENST00000414017 DPF3Q92784 378 aa11.73□□□□□ -0.53
HLA-DMB-257ENST00000414017 DYDC2Q96IM9 177 aa11.73□□□□□ -0.53
HLA-DMB-257ENST00000414017 RAB34Q9BZG1 259 aa11.73□□□□□ -0.53
HLA-DMB-257ENST00000414017 RGL1Q9NZL6 768 aa11.73□□□□□ -0.53
HLA-DMB-257ENST00000414017 LRWD1Q9UFC0 647 aa11.73□□□□□ -0.53
HLA-DMB-257ENST00000414017 NOD1Q9Y239 953 aa11.73□□□□□ -0.53
HLA-DMB-257ENST00000414017 EMSYQ7Z589 1322 aa11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 PP2D1A8MPX8 630 aa11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 ARVCFO00192 962 aa11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 LGR5O75473 907 aa11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 ATG7O95352 703 aa11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 F2P00734 622 aa11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 SMIM10L2AP0DMW4 78 aa11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 SMIM10L2BP0DMW5 78 aa11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 HOXD8P13378 290 aaPredicted RBP11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 CDC25AP30304 524 aa11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 SPIRE1Q08AE8 756 aa11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 PPFIA1Q13136 1202 aa11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 PLCB4Q15147 1175 aa11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 EPHA7Q15375 998 aa11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 IL17AQ16552 155 aa11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 RASSF8Q8NHQ8 419 aa11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 ERMNQ8TAM6 284 aa11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 EIF2AK1Q9BQI3 630 aaKnown RBP11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 HTATIP2Q9BUP3 242 aa11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 RNPEPQ9H4A4 650 aa11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 ERAP1Q9NZ08 941 aa11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 HDAC6Q9UBN7 1215 aa11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 SEPT9Q9UHD8 586 aaPredicted RBP11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 ATP6V1DQ9Y5K8 247 aa11.72□□□□□ -0.53
HLA-DMB-257ENST00000414017 GRIN2DO15399 1336 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 A0A087WWV3 80 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 POTEB3A0JP26 581 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 C17orf102A2RUQ5 167 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 DDX11L8A8MPP1 907 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 P4HBP07237 508 aaKnown RBP11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 DDIT3P35638 169 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 CCT6AP40227 531 aaKnown RBP11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 PRPHP41219 470 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 FXR2P51116 673 aaKnown RBP eCLIP11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 PSMC5P62195 406 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 ZNF200P98182 395 aaPredicted RBP11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 PRKCEQ02156 737 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 GRIN1Q05586 938 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 PTPAQ15257 358 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 SPECC1Q5M775 1068 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 POTEBQ6S5H4 581 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 B3GNT9Q6UX72 402 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 PLPPR4Q7Z2D5 763 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 C7orf61Q8IZ16 206 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 RDM1Q8NG50 284 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 SNX29Q8TEQ0 813 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 TRAPPC12Q8WVT3 735 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 ATP6V0A1Q93050 837 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 CCDC43Q96MW1 224 aaKnown RBP11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 CLIC6Q96NY7 704 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 PLIN2Q99541 437 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 SH2D3AQ9BRG2 576 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 LXNQ9BS40 222 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 PRDM5Q9NQX1 630 aaPredicted RBP11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 TRMT13Q9NUP7 481 aaKnown RBP11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 SETD4Q9NVD3 440 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 CHMP5Q9NZZ3 219 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 CFAP45Q9UL16 551 aa11.71□□□□□ -0.53
HLA-DMB-257ENST00000414017 IGSF9BQ9UPX0 1349 aa11.7□□□□□ -0.54
HLA-DMB-257ENST00000414017 IGKV6D-21A0A0A0MT36 114 aa11.7□□□□□ -0.54
HLA-DMB-257ENST00000414017 TMEM150BA6NC51 233 aa11.7□□□□□ -0.54
HLA-DMB-257ENST00000414017 DCDC2CA8MYV0 355 aa11.7□□□□□ -0.54
HLA-DMB-257ENST00000414017 SPTLC2O15270 562 aa11.7□□□□□ -0.54
HLA-DMB-257ENST00000414017 TLR3O15455 904 aaKnown RBP11.7□□□□□ -0.54
HLA-DMB-257ENST00000414017 EVI5O60447 810 aa11.7□□□□□ -0.54
HLA-DMB-257ENST00000414017 OATP04181 439 aa11.7□□□□□ -0.54
HLA-DMB-257ENST00000414017 INSRRP14616 1297 aa11.7□□□□□ -0.54
HLA-DMB-257ENST00000414017 QARSP47897 775 aaKnown RBP11.7□□□□□ -0.54
HLA-DMB-257ENST00000414017 ME1P48163 572 aa11.7□□□□□ -0.54
HLA-DMB-257ENST00000414017 NASPP49321 788 aaPredicted RBP11.7□□□□□ -0.54
HLA-DMB-257ENST00000414017 KRT85P78386 507 aa11.7□□□□□ -0.54
HLA-DMB-257ENST00000414017 TLE2Q04725 743 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms