RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 PA2G4Q9UQ80 394 aaKnown RBP6.46□□□□□ -1.38
LINC00342-201ENST00000412393 TNNQ9UQP3 1299 aa6.46□□□□□ -1.38
LINC00342-201ENST00000412393 SAMM50Q9Y512 469 aa6.46□□□□□ -1.38
LINC00342-201ENST00000412393 PPP2R3BQ9Y5P8 575 aa6.46□□□□□ -1.38
LINC00342-201ENST00000412393 LAMB1P07942 1786 aa6.46□□□□□ -1.38
LINC00342-201ENST00000412393 AOX1Q06278 1338 aa6.46□□□□□ -1.38
LINC00342-201ENST00000412393 SEMA7AO75326 666 aa6.45□□□□□ -1.38
LINC00342-201ENST00000412393 IL15P40933 162 aaPredicted RBP6.45□□□□□ -1.38
LINC00342-201ENST00000412393 HDLBPQ00341 1268 aaKnown RBP6.45□□□□□ -1.38
LINC00342-201ENST00000412393 TNFAIP1Q13829 316 aa6.45□□□□□ -1.38
LINC00342-201ENST00000412393 RASA3Q14644 834 aa6.45□□□□□ -1.38
LINC00342-201ENST00000412393 SUPT20HL1Q3ZLR7 823 aa6.45□□□□□ -1.38
LINC00342-201ENST00000412393 PPM1JQ5JR12 505 aa6.45□□□□□ -1.38
LINC00342-201ENST00000412393 LDLRAD1Q5T700 205 aa6.45□□□□□ -1.38
LINC00342-201ENST00000412393 NBPF12Q5TAG4 269 aaPredicted RBP6.45□□□□□ -1.38
LINC00342-201ENST00000412393 ZBTB37Q5TC79 503 aa6.45□□□□□ -1.38
LINC00342-201ENST00000412393 ZKSCAN2Q63HK3 967 aa6.45□□□□□ -1.38
LINC00342-201ENST00000412393 TMPRSS7Q7RTY8 843 aa6.45□□□□□ -1.38
LINC00342-201ENST00000412393 TTC6Q86TZ1 520 aa6.45□□□□□ -1.38
LINC00342-201ENST00000412393 BAHD1Q8TBE0 780 aaPredicted RBP6.45□□□□□ -1.38
LINC00342-201ENST00000412393 WDR66Q8TBY9 1149 aa6.45□□□□□ -1.38
LINC00342-201ENST00000412393 IRF2BPLQ9H1B7 796 aa6.45□□□□□ -1.38
LINC00342-201ENST00000412393 COPRSQ9NQ92 184 aa6.45□□□□□ -1.38
LINC00342-201ENST00000412393 GNL3LQ9NVN8 582 aaKnown RBP6.45□□□□□ -1.38
LINC00342-201ENST00000412393 RNF186Q9NXI6 227 aa6.45□□□□□ -1.38
LINC00342-201ENST00000412393 ZNF70Q9UC06 446 aaPredicted RBP6.45□□□□□ -1.38
LINC00342-201ENST00000412393 FZD1Q9UP38 647 aa6.45□□□□□ -1.38
LINC00342-201ENST00000412393 ST14Q9Y5Y6 855 aa6.45□□□□□ -1.38
LINC00342-201ENST00000412393 MAST3O60307 1309 aa6.45□□□□□ -1.38
LINC00342-201ENST00000412393 SSC5DA1L4H1 1573 aa6.44□□□□□ -1.38
LINC00342-201ENST00000412393 TCP10L2B9ZVM9 353 aa6.44□□□□□ -1.38
LINC00342-201ENST00000412393 EIF1AYO14602 144 aaKnown RBP6.44□□□□□ -1.38
LINC00342-201ENST00000412393 SRGAP3O43295 1099 aa6.44□□□□□ -1.38
LINC00342-201ENST00000412393 PEX10O60683 326 aa6.44□□□□□ -1.38
LINC00342-201ENST00000412393 ICMTO60725 284 aa6.44□□□□□ -1.38
LINC00342-201ENST00000412393 GNAI2P04899 355 aa6.44□□□□□ -1.38
LINC00342-201ENST00000412393 TNNI2P48788 182 aa6.44□□□□□ -1.38
LINC00342-201ENST00000412393 MTX1Q13505 466 aa6.44□□□□□ -1.38
LINC00342-201ENST00000412393 IRF2BP1Q8IU81 584 aa6.44□□□□□ -1.38
LINC00342-201ENST00000412393 TMEM151BQ8IW70 566 aa6.44□□□□□ -1.38
LINC00342-201ENST00000412393 TMEM57Q8N5G2 664 aa6.44□□□□□ -1.38
LINC00342-201ENST00000412393 ZNF507Q8TCN5 953 aa6.44□□□□□ -1.38
LINC00342-201ENST00000412393 TEKT1Q969V4 418 aa6.44□□□□□ -1.38
LINC00342-201ENST00000412393 MRIQ9BWK5 157 aa6.44□□□□□ -1.38
LINC00342-201ENST00000412393 SAGE1Q9NXZ1 904 aa6.44□□□□□ -1.38
LINC00342-201ENST00000412393 RTEL1Q9NZ71 1219 aa6.44□□□□□ -1.38
LINC00342-201ENST00000412393 TMEM59LQ9UK28 342 aa6.44□□□□□ -1.38
LINC00342-201ENST00000412393 TPX2Q9ULW0 747 aaKnown RBP6.44□□□□□ -1.38
LINC00342-201ENST00000412393 SUGT1Q9Y2Z0 365 aa6.44□□□□□ -1.38
LINC00342-201ENST00000412393 MYO5AQ9Y4I1 1855 aaKnown RBP6.44□□□□□ -1.38
LINC00342-201ENST00000412393 H3BS24 57 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 USP2O75604 605 aaPredicted RBP6.43□□□□□ -1.38
LINC00342-201ENST00000412393 HPXP02790 462 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 ADORA1P30542 326 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 CAP2P40123 477 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 KIR3DL1P43629 444 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 PHKA1P46020 1223 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 SREBF2Q12772 1141 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 TFCP2Q12800 502 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 MAP3K11Q16584 847 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 CDKAL1Q5VV42 579 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 TCERG1LQ5VWI1 586 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 HHIPL2Q6UWX4 724 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 CENPQQ7L2Z9 268 aaPredicted RBP6.43□□□□□ -1.38
LINC00342-201ENST00000412393 MFSD2AQ8NA29 543 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 CXorf38Q8TB03 319 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 ABHD8Q96I13 439 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 CLMNQ96JQ2 1002 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 ZDHHC15Q96MV8 337 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 KCNC2Q96PR1 638 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 TMOD2Q9NZR1 351 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 SLAMF8Q9P0V8 285 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 DENND2AQ9ULE3 1009 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 AKAP2Q9Y2D5 859 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 CAPN6Q9Y6Q1 641 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 DOCK2Q92608 1830 aa6.43□□□□□ -1.38
LINC00342-201ENST00000412393 PNMA6EA0A0J9YXQ4 647 aa6.42□□□□□ -1.38
LINC00342-201ENST00000412393 A0A1B0GUL7 405 aa6.42□□□□□ -1.38
LINC00342-201ENST00000412393 MANSC4A6NHS7 340 aaPredicted RBP6.42□□□□□ -1.38
LINC00342-201ENST00000412393 UNCXA6NJT0 531 aa6.42□□□□□ -1.38
LINC00342-201ENST00000412393 SLITRK5O94991 958 aa6.42□□□□□ -1.38
LINC00342-201ENST00000412393 LDHBP07195 334 aaKnown RBP6.42□□□□□ -1.38
LINC00342-201ENST00000412393 BMP7P18075 431 aa6.42□□□□□ -1.38
LINC00342-201ENST00000412393 PRDX5P30044 214 aa6.42□□□□□ -1.38
LINC00342-201ENST00000412393 TM4SF4P48230 202 aa6.42□□□□□ -1.38
LINC00342-201ENST00000412393 CACNB3P54284 484 aa6.42□□□□□ -1.38
LINC00342-201ENST00000412393 FCGRTP55899 365 aa6.42□□□□□ -1.38
LINC00342-201ENST00000412393 TIMM10P62072 90 aa6.42□□□□□ -1.38
LINC00342-201ENST00000412393 G3BP1Q13283 466 aaKnown RBP eCLIP6.42□□□□□ -1.38
LINC00342-201ENST00000412393 ZNF211Q13398 564 aaPredicted RBP6.42□□□□□ -1.38
LINC00342-201ENST00000412393 MVPQ14764 893 aaKnown RBP6.42□□□□□ -1.38
LINC00342-201ENST00000412393 FKBP1CQ5VVH2 108 aa6.42□□□□□ -1.38
LINC00342-201ENST00000412393 APOBEC3HQ6NTF7 200 aaKnown RBP6.42□□□□□ -1.38
LINC00342-201ENST00000412393 FTSJ3Q8IY81 847 aaKnown RBP6.42□□□□□ -1.38
LINC00342-201ENST00000412393 ANKRD13AQ8IZ07 590 aa6.42□□□□□ -1.38
LINC00342-201ENST00000412393 LILRA2Q8N149 483 aa6.42□□□□□ -1.38
LINC00342-201ENST00000412393 ZGPATQ8N5A5 531 aaKnown RBP6.42□□□□□ -1.38
LINC00342-201ENST00000412393 EXOC6Q8TAG9 804 aa6.42□□□□□ -1.38
LINC00342-201ENST00000412393 WNK4Q96J92 1243 aa6.42□□□□□ -1.38
LINC00342-201ENST00000412393 TEPSINQ96N21 525 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms