RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 CEP70Q8NHQ1 597 aa7.92□□□□□ -1.14
PTPN3-203ENST00000412145 RWDD2AQ9UIY3 292 aa7.92□□□□□ -1.14
PTPN3-203ENST00000412145 FAM107AO95990 144 aa7.92□□□□□ -1.14
PTPN3-203ENST00000412145 SERPING1P05155 500 aa7.92□□□□□ -1.14
PTPN3-203ENST00000412145 YWHAHQ04917 246 aaPredicted RBP7.92□□□□□ -1.14
PTPN3-203ENST00000412145 SPOUT1Q5T280 376 aaKnown RBP7.92□□□□□ -1.14
PTPN3-203ENST00000412145 ARHGEF16Q5VV41 709 aa7.92□□□□□ -1.14
PTPN3-203ENST00000412145 RSRC2Q7L4I2 434 aaKnown RBP7.92□□□□□ -1.14
PTPN3-203ENST00000412145 THOC1Q96FV9 657 aaKnown RBP7.92□□□□□ -1.14
PTPN3-203ENST00000412145 UBN1Q9NPG3 1134 aa7.92□□□□□ -1.14
PTPN3-203ENST00000412145 ZNF215Q9UL58 517 aaPredicted RBP7.92□□□□□ -1.14
PTPN3-203ENST00000412145 PCDHA12Q9UN75 941 aa7.92□□□□□ -1.14
PTPN3-203ENST00000412145 MRPS25P82663 173 aaKnown RBP7.92□□□□□ -1.14
PTPN3-203ENST00000412145 TFDP2Q14188 446 aa7.92□□□□□ -1.14
PTPN3-203ENST00000412145 C20orf194Q5TEA3 1177 aa7.92□□□□□ -1.14
PTPN3-203ENST00000412145 LRRC8EQ6NSJ5 796 aa7.92□□□□□ -1.14
PTPN3-203ENST00000412145 KIAA2013Q8IYS2 634 aa7.92□□□□□ -1.14
PTPN3-203ENST00000412145 CCDC17Q96LX7 622 aa7.92□□□□□ -1.14
PTPN3-203ENST00000412145 NR1H4Q96RI1 486 aaPredicted RBP7.92□□□□□ -1.14
PTPN3-203ENST00000412145 PA2G4Q9UQ80 394 aaKnown RBP7.92□□□□□ -1.14
PTPN3-203ENST00000412145 TBX22Q9Y458 520 aa7.92□□□□□ -1.14
PTPN3-203ENST00000412145 TFCP2Q12800 502 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 TRMT10CQ7L0Y3 403 aaKnown RBP7.91□□□□□ -1.14
PTPN3-203ENST00000412145 TEX2Q8IWB9 1127 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 TRIM63Q969Q1 353 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 CCDC127Q96BQ5 260 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 SHANK2Q9UPX8 1470 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 PFKFB2O60825 505 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 NUP62P37198 522 aaPredicted RBP7.91□□□□□ -1.14
PTPN3-203ENST00000412145 NLRP11P59045 1033 aaKnown RBP7.91□□□□□ -1.14
PTPN3-203ENST00000412145 ARMCX5Q6P1M9 558 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 PROM2Q8N271 834 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 PARD3BQ8TEW8 1205 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 DDX17Q92841 729 aaKnown RBP7.91□□□□□ -1.14
PTPN3-203ENST00000412145 ORAI2Q96SN7 254 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 GNPATO15228 680 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 LDHAP00338 332 aaKnown RBP7.91□□□□□ -1.14
PTPN3-203ENST00000412145 POLGP54098 1239 aaPredicted RBP7.91□□□□□ -1.14
PTPN3-203ENST00000412145 RNASE9P60153 205 aaKnown RBP7.91□□□□□ -1.14
PTPN3-203ENST00000412145 ZBED6P86452 979 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 GUCY1A3Q02108 690 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 DNAL1Q4LDG9 190 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 CCDC184Q52MB2 194 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 SLC7A3Q8WY07 619 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 PSTPIP2Q9H939 334 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 ZMYND8Q9ULU4 1186 aaPredicted RBP7.91□□□□□ -1.14
PTPN3-203ENST00000412145 KRT72Q14CN4 511 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 GPR162Q16538 588 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 KIAA1755Q5JYT7 1200 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 SCYL2Q6P3W7 929 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 GIMAP8Q8ND71 665 aaPredicted RBP7.91□□□□□ -1.14
PTPN3-203ENST00000412145 LSG1Q9H089 658 aaKnown RBP7.91□□□□□ -1.14
PTPN3-203ENST00000412145 GID8Q9NWU2 228 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 DDX25Q9UHL0 483 aaKnown RBP7.91□□□□□ -1.14
PTPN3-203ENST00000412145 ITM2BQ9Y287 266 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 COPEO14579 308 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 BRD1O95696 1058 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 TCF3P15923 654 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 SLC9A1P19634 815 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 ERICH1Q86X53 443 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 FAM9CQ8IZT9 166 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 ALKBH8Q96BT7 664 aaKnown RBP7.91□□□□□ -1.14
PTPN3-203ENST00000412145 GPCPD1Q9NPB8 672 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 WDR70Q9NW82 654 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 SEL1LQ9UBV2 794 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 CSADQ9Y600 493 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 PFASO15067 1338 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 TK2O00142 265 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 COPB1P53618 953 aaKnown RBP7.91□□□□□ -1.14
PTPN3-203ENST00000412145 COPS2P61201 443 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 NNTQ13423 1086 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 TMED2Q15363 201 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 CENPPQ6IPU0 288 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 KCTD6Q8NC69 237 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 SCFD1Q8WVM8 642 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 ZSCAN10Q96SZ4 725 aaPredicted RBP7.91□□□□□ -1.14
PTPN3-203ENST00000412145 IL1RAPL1Q9NZN1 696 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 CCNL1Q9UK58 526 aaPredicted RBP7.91□□□□□ -1.14
PTPN3-203ENST00000412145 ABCB4P21439 1286 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 CYLC2Q14093 348 aaPredicted RBP7.91□□□□□ -1.14
PTPN3-203ENST00000412145 FAM102BQ5T8I3 360 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 TTC23LQ6PF05 361 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 C11orf88Q6PI97 169 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 MMS19Q96T76 1030 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 TMEM245Q9H330 911 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 NSMCE4AQ9NXX6 385 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 PCDHB8Q9UN66 801 aa7.91□□□□□ -1.14
PTPN3-203ENST00000412145 ZBBXA8MT70 800 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 SLC26A4O43511 780 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 SCP2P22307 547 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 EFTUD2Q15029 972 aaKnown RBP eCLIP7.9□□□□□ -1.14
PTPN3-203ENST00000412145 SIX6OS1Q8N1H7 587 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 DDI1Q8WTU0 396 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 PYROXD1Q8WU10 500 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 ACAP3Q96P50 834 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 OSBPL9Q96SU4 736 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 MLXIPQ9HAP2 919 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 SMYD2Q9NRG4 433 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 UTP6Q9NYH9 597 aaKnown RBP7.9□□□□□ -1.14
PTPN3-203ENST00000412145 SRPRBQ9Y5M8 271 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms