RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 IQCDQ96DY2 449 aa8.35□□□□□ -1.07
CXCR4-202ENST00000409817 C16orf45Q96MC5 204 aaPredicted RBP8.35□□□□□ -1.07
CXCR4-202ENST00000409817 PLIN2Q99541 437 aa8.35□□□□□ -1.07
CXCR4-202ENST00000409817 NUP88Q99567 741 aaPredicted RBP8.35□□□□□ -1.07
CXCR4-202ENST00000409817 BAG1Q99933 345 aaPredicted RBP8.35□□□□□ -1.07
CXCR4-202ENST00000409817 C1QTNF2Q9BXJ5 285 aa8.35□□□□□ -1.07
CXCR4-202ENST00000409817 MAGEC2Q9UBF1 373 aaPredicted RBP8.35□□□□□ -1.07
CXCR4-202ENST00000409817 KIAA1024Q9UPX6 916 aa8.35□□□□□ -1.07
CXCR4-202ENST00000409817 GNEQ9Y223 722 aaKnown RBP8.35□□□□□ -1.07
CXCR4-202ENST00000409817 ABCB11O95342 1321 aa8.35□□□□□ -1.07
CXCR4-202ENST00000409817 GCOM1H8Y6P7 765 aaPredicted RBP8.34□□□□□ -1.07
CXCR4-202ENST00000409817 NFKBIEO00221 500 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 KIF20AO95235 890 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 POLR2MP0CAP2 368 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 CCT6AP40227 531 aaKnown RBP8.34□□□□□ -1.07
CXCR4-202ENST00000409817 ECE1P42892 770 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 LRRC63Q05C16 580 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 USH1GQ495M9 461 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 HSP90AA4PQ58FG1 418 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 FAM83BQ5T0W9 1011 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 CEP135Q66GS9 1140 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 E4F1Q66K89 784 aaPredicted RBP8.34□□□□□ -1.07
CXCR4-202ENST00000409817 BPHLQ86WA6 291 aaPredicted RBP8.34□□□□□ -1.07
CXCR4-202ENST00000409817 GUF1Q8N442 669 aaKnown RBP8.34□□□□□ -1.07
CXCR4-202ENST00000409817 TC2NQ8N9U0 490 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 ETNPPLQ8TBG4 499 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 ACER1Q8TDN7 264 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 TRIM47Q96LD4 638 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 PITPNM2Q9BZ72 1349 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 MYMKA6NI61 221 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 FZD9O00144 591 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 WDR46O15213 610 aaKnown RBP8.34□□□□□ -1.07
CXCR4-202ENST00000409817 CTNND1O60716 968 aaKnown RBP8.34□□□□□ -1.07
CXCR4-202ENST00000409817 MUTP22033 750 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 EHHADHQ08426 723 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 RASA3Q14644 834 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 EML3Q32P44 896 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 NBPF9Q3BBW0 867 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 CENPPQ6IPU0 288 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 TMEM139Q8IV31 216 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 ANKMY2Q8IV38 441 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 SPICE1Q8N0Z3 855 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 CSGALNACT2Q8N6G5 542 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 KIF18AQ8NI77 898 aa8.34□□□□□ -1.07
CXCR4-202ENST00000409817 MAP3K20Q9NYL2 800 aaKnown RBP8.34□□□□□ -1.07
CXCR4-202ENST00000409817 LGALS16A8MUM7 142 aa8.33□□□□□ -1.08
CXCR4-202ENST00000409817 PHF20L1A8MW92 1017 aa8.33□□□□□ -1.08
CXCR4-202ENST00000409817 OPLAHO14841 1288 aa8.33□□□□□ -1.08
CXCR4-202ENST00000409817 TEX33O43247 280 aa8.33□□□□□ -1.08
CXCR4-202ENST00000409817 MFAP3LO75121 409 aa8.33□□□□□ -1.08
CXCR4-202ENST00000409817 RPA1P27694 616 aa8.33□□□□□ -1.08
CXCR4-202ENST00000409817 DNM2P50570 870 aa8.33□□□□□ -1.08
CXCR4-202ENST00000409817 SH3BP2P78314 561 aa8.33□□□□□ -1.08
CXCR4-202ENST00000409817 STK4Q13043 487 aa8.33□□□□□ -1.08
CXCR4-202ENST00000409817 PRR16Q569H4 304 aa8.33□□□□□ -1.08
CXCR4-202ENST00000409817 DCAF15Q66K64 600 aa8.33□□□□□ -1.08
CXCR4-202ENST00000409817 CCDC65Q8IXS2 484 aa8.33□□□□□ -1.08
CXCR4-202ENST00000409817 LENG9Q96B70 501 aa8.33□□□□□ -1.08
CXCR4-202ENST00000409817 PPP1R13BQ96KQ4 1090 aa8.33□□□□□ -1.08
CXCR4-202ENST00000409817 TEPSINQ96N21 525 aa8.33□□□□□ -1.08
CXCR4-202ENST00000409817 NUP58Q9BVL2 599 aa8.33□□□□□ -1.08
CXCR4-202ENST00000409817 SRRTQ9BXP5 876 aaKnown RBP8.33□□□□□ -1.08
CXCR4-202ENST00000409817 KIAA1683Q9H0B3 1180 aa8.33□□□□□ -1.08
CXCR4-202ENST00000409817 USP27XA6NNY8 438 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 ICAM1P05362 532 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 ZNF76P36508 570 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 USP14P54578 494 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 SETQ01105 290 aaPredicted RBP8.32□□□□□ -1.08
CXCR4-202ENST00000409817 GHRHRQ02643 423 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 SPIRE1Q08AE8 756 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 SYCP1Q15431 976 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 MIGA2Q7L4E1 593 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 MTERF4Q7Z6M4 381 aaKnown RBP8.32□□□□□ -1.08
CXCR4-202ENST00000409817 MCF2L2Q86YR7 1114 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 IRF2BP1Q8IU81 584 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 PRPF38AQ8NAV1 312 aaKnown RBP8.32□□□□□ -1.08
CXCR4-202ENST00000409817 KIAA0895Q8NCT3 520 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 KIFC2Q96AC6 838 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 FEZ1Q99689 392 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 TSG101Q99816 390 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 DUSP9Q99956 384 aaKnown RBP8.32□□□□□ -1.08
CXCR4-202ENST00000409817 POLR3CQ9BUI4 534 aaPredicted RBP8.32□□□□□ -1.08
CXCR4-202ENST00000409817 DOLKQ9UPQ8 538 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 MAPK8IP1Q9UQF2 711 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 ATAD5Q96QE3 1844 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 TRIM49BA6NDI0 452 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 FAM86B1E9PN63 330 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 FAM86B2P0C5J1 330 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 PLA2G4BP0C869 781 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 PMS1P54277 932 aaKnown RBP8.32□□□□□ -1.08
CXCR4-202ENST00000409817 UBXN1Q04323 297 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 RBL2Q08999 1139 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 KIAA1755Q5JYT7 1200 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 SND1Q7KZF4 910 aaKnown RBP eCLIP8.32□□□□□ -1.08
CXCR4-202ENST00000409817 KRT26Q7Z3Y9 468 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 TMTC1Q8IUR5 882 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 APOBEC3FQ8IUX4 373 aaKnown RBP8.32□□□□□ -1.08
CXCR4-202ENST00000409817 CDAN1Q8IWY9 1227 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 MB21D1Q8N884 522 aa8.32□□□□□ -1.08
CXCR4-202ENST00000409817 ZNF507Q8TCN5 953 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms