RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 MRPS23Q9Y3D9 190 aaKnown RBP6.39□□□□□ -1.39
CLK1-202ENST00000409403 A0A0G2JLW4 131 aa6.38□□□□□ -1.39
CLK1-202ENST00000409403 RASSF10A6NK89 507 aa6.38□□□□□ -1.39
CLK1-202ENST00000409403 SMTNL1A8MU46 457 aa6.38□□□□□ -1.39
CLK1-202ENST00000409403 PPP1R12AO14974 1030 aaPredicted RBP6.38□□□□□ -1.39
CLK1-202ENST00000409403 PRODHO43272 600 aa6.38□□□□□ -1.39
CLK1-202ENST00000409403 IGLV1-40P01703 118 aa6.38□□□□□ -1.39
CLK1-202ENST00000409403 PABPC1P11940 636 aaKnown RBP6.38□□□□□ -1.39
CLK1-202ENST00000409403 GYS2P54840 703 aa6.38□□□□□ -1.39
CLK1-202ENST00000409403 OXCT1P55809 520 aa6.38□□□□□ -1.39
CLK1-202ENST00000409403 GTF2IRD2BQ6EKJ0 949 aa6.38□□□□□ -1.39
CLK1-202ENST00000409403 NSMFQ6X4W1 530 aa6.38□□□□□ -1.39
CLK1-202ENST00000409403 GTF2IRD2Q86UP8 949 aa6.38□□□□□ -1.39
CLK1-202ENST00000409403 SHKBP1Q8TBC3 707 aa6.38□□□□□ -1.39
CLK1-202ENST00000409403 IER2Q9BTL4 223 aa6.38□□□□□ -1.39
CLK1-202ENST00000409403 HDAC8Q9BY41 377 aa6.38□□□□□ -1.39
CLK1-202ENST00000409403 TMX1Q9H3N1 280 aa6.38□□□□□ -1.39
CLK1-202ENST00000409403 MKNK2Q9HBH9 465 aa6.38□□□□□ -1.39
CLK1-202ENST00000409403 CWC15Q9P013 229 aaKnown RBP6.38□□□□□ -1.39
CLK1-202ENST00000409403 CTNNA3Q9UI47 895 aa6.38□□□□□ -1.39
CLK1-202ENST00000409403 MINPP1Q9UNW1 487 aa6.38□□□□□ -1.39
CLK1-202ENST00000409403 KNSTRNQ9Y448 316 aa6.38□□□□□ -1.39
CLK1-202ENST00000409403 PRKAB1Q9Y478 270 aa6.38□□□□□ -1.39
CLK1-202ENST00000409403 PAXBP1Q9Y5B6 917 aa6.38□□□□□ -1.39
CLK1-202ENST00000409403 H0Y8X5 98 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 MEIS1O00470 390 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 GSNP06396 782 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 SRFP11831 508 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 ITIH2P19823 946 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 FSTP19883 344 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 PPP2R1AP30153 589 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 AMPD2Q01433 879 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 DOC2BQ14184 412 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 MVPQ14764 893 aaKnown RBP6.37□□□□□ -1.39
CLK1-202ENST00000409403 BMP2KLQ5H9B9 411 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 TEX35Q5T0J7 233 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 CWF19L1Q69YN2 538 aaKnown RBP6.37□□□□□ -1.39
CLK1-202ENST00000409403 ZNF655Q8N720 491 aaPredicted RBP6.37□□□□□ -1.39
CLK1-202ENST00000409403 FAM181AQ8N9Y4 354 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 DAGLBQ8NCG7 672 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 PANK1Q8TE04 598 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 OSBP2Q969R2 916 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 CCDC140Q96MF4 163 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 NKX2-4Q9H2Z4 354 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 TRIT1Q9H3H1 467 aaKnown RBP6.37□□□□□ -1.39
CLK1-202ENST00000409403 GPATCH2Q9NW75 528 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 HDAC5Q9UQL6 1122 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 PLAAQ9Y263 795 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 SCN11AQ9UI33 1791 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 UNC80Q8N2C7 3258 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 CPDO75976 1380 aa6.37□□□□□ -1.39
CLK1-202ENST00000409403 GLTPD2A6NH11 291 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 HTATSF1O43719 755 aaKnown RBP6.36□□□□□ -1.39
CLK1-202ENST00000409403 PLA2G5P39877 138 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 SUMO1P63165 101 aaKnown RBP6.36□□□□□ -1.39
CLK1-202ENST00000409403 POU4F1Q01851 419 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 GRM1Q13255 1194 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 NKPD1Q17RQ9 610 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 DEFB115Q30KQ5 88 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 CDKAL1Q5VV42 579 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 TXLNBQ8N3L3 684 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 ZNF397Q8NF99 534 aaPredicted RBP6.36□□□□□ -1.39
CLK1-202ENST00000409403 MYCBPQ99417 103 aaPredicted RBP6.36□□□□□ -1.39
CLK1-202ENST00000409403 DUSP15Q9H1R2 295 aaPredicted RBP6.36□□□□□ -1.39
CLK1-202ENST00000409403 NCOA5Q9HCD5 579 aaKnown RBP6.36□□□□□ -1.39
CLK1-202ENST00000409403 USP25Q9UHP3 1055 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 GPR55Q9Y2T6 319 aaPredicted RBP6.36□□□□□ -1.39
CLK1-202ENST00000409403 ST14Q9Y5Y6 855 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 U3KQE9 123 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 DICER1Q9UPY3 1922 aaKnown RBP6.36□□□□□ -1.39
CLK1-202ENST00000409403 ANKARQ7Z5J8 1434 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 RAD50Q92878 1312 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 C4BP0C0L5 1744 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 DNAJC25-GNG10A0A024R161 153 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 REC8O95072 547 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 CEACAM5P06731 702 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 HSP90B1P14625 803 aaKnown RBP6.36□□□□□ -1.39
CLK1-202ENST00000409403 HOXC12P31275 282 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 CTSKP43235 329 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 RARSP54136 660 aaKnown RBP6.36□□□□□ -1.39
CLK1-202ENST00000409403 MUM1L1Q5H9M0 696 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 SLC51AQ86UW1 340 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 SPACA3Q8IXA5 215 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 KIF18AQ8NI77 898 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 KCTD13Q8WZ19 329 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 LRRC4CQ9HCJ2 640 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 CYP26B1Q9NR63 512 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 DDX19BQ9UMR2 479 aa6.36□□□□□ -1.39
CLK1-202ENST00000409403 KDM6AO15550 1401 aaPredicted RBP6.35□□□□□ -1.39
CLK1-202ENST00000409403 ADAMTSL1Q8N6G6 1762 aa6.35□□□□□ -1.39
CLK1-202ENST00000409403 MKI67P46013 3256 aaKnown RBP6.35□□□□□ -1.39
CLK1-202ENST00000409403 SYCE3A1L190 88 aa6.35□□□□□ -1.39
CLK1-202ENST00000409403 PLD2O14939 933 aa6.35□□□□□ -1.39
CLK1-202ENST00000409403 ADAM23O75077 832 aa6.35□□□□□ -1.39
CLK1-202ENST00000409403 VAMP4O75379 141 aa6.35□□□□□ -1.39
CLK1-202ENST00000409403 HMGB1P09429 215 aaKnown RBP6.35□□□□□ -1.39
CLK1-202ENST00000409403 KCNJ6P48051 423 aa6.35□□□□□ -1.39
CLK1-202ENST00000409403 CLCN7P51798 805 aa6.35□□□□□ -1.39
CLK1-202ENST00000409403 GTF2A1P52655 376 aaPredicted RBP6.35□□□□□ -1.39
CLK1-202ENST00000409403 GFRA1P56159 465 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms