RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 KCNV2Q8TDN2 545 aa24.34■■□□□ 1.49
CUEDC1-202ENST00000407144 FAM207AQ9NSI2 230 aaPredicted RBP24.34■■□□□ 1.49
CUEDC1-202ENST00000407144 PRPF3O43395 683 aaKnown RBP24.33■■□□□ 1.49
CUEDC1-202ENST00000407144 RNASE9P60153 205 aaKnown RBP24.33■■□□□ 1.49
CUEDC1-202ENST00000407144 TSNAXIP1Q2TAA8 658 aa24.33■■□□□ 1.49
CUEDC1-202ENST00000407144 COBLL1Q53SF7 1204 aa24.33■■□□□ 1.49
CUEDC1-202ENST00000407144 AKNAD1Q5T1N1 836 aa24.33■■□□□ 1.49
CUEDC1-202ENST00000407144 IRGCQ6NXR0 463 aa24.33■■□□□ 1.49
CUEDC1-202ENST00000407144 KIF2BQ8N4N8 673 aa24.33■■□□□ 1.49
CUEDC1-202ENST00000407144 ZNF513Q8N8E2 541 aaPredicted RBP24.33■■□□□ 1.49
CUEDC1-202ENST00000407144 TBC1D16Q8TBP0 767 aa24.33■■□□□ 1.49
CUEDC1-202ENST00000407144 PCMTD2Q9NV79 361 aa24.33■■□□□ 1.49
CUEDC1-202ENST00000407144 MYH1P12882 1939 aa24.33■■□□□ 1.49
CUEDC1-202ENST00000407144 CHD4Q14839 1912 aa24.33■■□□□ 1.49
CUEDC1-202ENST00000407144 MYH2Q9UKX2 1941 aa24.33■■□□□ 1.49
CUEDC1-202ENST00000407144 UPP2O95045 317 aa24.33■■□□□ 1.48
CUEDC1-202ENST00000407144 PSMC4P43686 418 aa24.33■■□□□ 1.48
CUEDC1-202ENST00000407144 SLC9C1Q4G0N8 1177 aa24.33■■□□□ 1.48
CUEDC1-202ENST00000407144 OR52E8Q6IFG1 317 aa24.33■■□□□ 1.48
CUEDC1-202ENST00000407144 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.33■■□□□ 1.48
CUEDC1-202ENST00000407144 ZNF654Q8IZM8 581 aa24.33■■□□□ 1.48
CUEDC1-202ENST00000407144 CMTR1Q8N1G2 835 aaKnown RBP24.33■■□□□ 1.48
CUEDC1-202ENST00000407144 PLBD2Q8NHP8 589 aa24.33■■□□□ 1.48
CUEDC1-202ENST00000407144 SH3TC2Q8TF17 1288 aa24.33■■□□□ 1.48
CUEDC1-202ENST00000407144 STK32AQ8WU08 396 aa24.33■■□□□ 1.48
CUEDC1-202ENST00000407144 KBTBD4Q9NVX7 518 aa24.33■■□□□ 1.48
CUEDC1-202ENST00000407144 ABCA3Q99758 1704 aa24.32■■□□□ 1.48
CUEDC1-202ENST00000407144 PNPLA7Q6ZV29 1317 aa24.32■■□□□ 1.48
CUEDC1-202ENST00000407144 PGRMC1O00264 195 aaKnown RBP24.32■■□□□ 1.48
CUEDC1-202ENST00000407144 FAM163BP0C2L3 166 aa24.32■■□□□ 1.48
CUEDC1-202ENST00000407144 KLRC1P26715 233 aa24.32■■□□□ 1.48
CUEDC1-202ENST00000407144 DNA2P51530 1060 aa24.32■■□□□ 1.48
CUEDC1-202ENST00000407144 USP11P51784 963 aa24.32■■□□□ 1.48
CUEDC1-202ENST00000407144 NAALADL2Q58DX5 795 aa24.32■■□□□ 1.48
CUEDC1-202ENST00000407144 ENDOVQ8N8Q3 282 aaKnown RBP24.32■■□□□ 1.48
CUEDC1-202ENST00000407144 ANKS1AQ92625 1134 aa24.32■■□□□ 1.48
CUEDC1-202ENST00000407144 LRRC4CQ9HCJ2 640 aa24.32■■□□□ 1.48
CUEDC1-202ENST00000407144 ARL2BPQ9Y2Y0 163 aa24.32■■□□□ 1.48
CUEDC1-202ENST00000407144 KCNK3O14649 394 aa24.32■■□□□ 1.48
CUEDC1-202ENST00000407144 CREB3O43889 395 aa24.32■■□□□ 1.48
CUEDC1-202ENST00000407144 ITGA6P23229 1130 aa24.32■■□□□ 1.48
CUEDC1-202ENST00000407144 CHADLQ6NUI6 762 aa24.32■■□□□ 1.48
CUEDC1-202ENST00000407144 MAIP1Q8WWC4 291 aa24.32■■□□□ 1.48
CUEDC1-202ENST00000407144 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.32■■□□□ 1.48
CUEDC1-202ENST00000407144 STMN4Q9H169 189 aaPredicted RBP24.32■■□□□ 1.48
CUEDC1-202ENST00000407144 MMRN2Q9H8L6 949 aa24.32■■□□□ 1.48
CUEDC1-202ENST00000407144 CYP39A1Q9NYL5 469 aa24.32■■□□□ 1.48
CUEDC1-202ENST00000407144 SERPING1P05155 500 aa24.31■■□□□ 1.48
CUEDC1-202ENST00000407144 CCDC15Q0P6D6 951 aa24.31■■□□□ 1.48
CUEDC1-202ENST00000407144 CCDC152Q4G0S7 254 aa24.31■■□□□ 1.48
CUEDC1-202ENST00000407144 CCDC178Q5BJE1 867 aa24.31■■□□□ 1.48
CUEDC1-202ENST00000407144 C6orf118Q5T5N4 469 aa24.31■■□□□ 1.48
CUEDC1-202ENST00000407144 C1QTNF12Q5T7M4 302 aa24.31■■□□□ 1.48
CUEDC1-202ENST00000407144 ABTB2Q8N961 1025 aa24.31■■□□□ 1.48
CUEDC1-202ENST00000407144 SUDS3Q9H7L9 328 aaPredicted RBP24.31■■□□□ 1.48
CUEDC1-202ENST00000407144 A0A1B0GVG6 124 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 TPBGLP0DKB5 382 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 MAN2A1Q16706 1144 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 TMC4Q7Z404 712 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 ANKRD23Q86SG2 305 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 NBPF15Q8N660 670 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 ZNF594Q96JF6 807 aaPredicted RBP24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 RPS6KC1Q96S38 1066 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 STRBPQ96SI9 672 aaKnown RBP24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 TMEM109Q9BVC6 243 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 MTFR1LQ9H019 292 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 ZWILCHQ9H900 591 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 DMAP1Q9NPF5 467 aaPredicted RBP24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 NKX1-2Q9UD57 310 aaPredicted RBP24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 PACSIN2Q9UNF0 486 aaPredicted RBP24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 UTP11Q9Y3A2 253 aaKnown RBP24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 PCDHGA4Q9Y5G9 962 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 SHBGP04278 402 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 RXRBP28702 533 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 RAD23BP54727 409 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 NPY5RQ15761 445 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 MFSD6Q6ZSS7 791 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 ASAP3Q8TDY4 903 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 FGD4Q96M96 766 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 FMO2Q99518 471 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 MAGEF1Q9HAY2 307 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 CTTNBP2NLQ9P2B4 639 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 PHF24Q9UPV7 400 aa24.3■■□□□ 1.48
CUEDC1-202ENST00000407144 RGS16O15492 202 aaPredicted RBP24.29■■□□□ 1.48
CUEDC1-202ENST00000407144 RRP12Q5JTH9 1297 aaKnown RBP24.29■■□□□ 1.48
CUEDC1-202ENST00000407144 FAM136AQ96C01 138 aa24.29■■□□□ 1.48
CUEDC1-202ENST00000407144 ZNF512BQ96KM6 892 aaPredicted RBP24.29■■□□□ 1.48
CUEDC1-202ENST00000407144 PUS3Q9BZE2 481 aaKnown RBP24.29■■□□□ 1.48
CUEDC1-202ENST00000407144 EPB41L4BQ9H329 900 aa24.29■■□□□ 1.48
CUEDC1-202ENST00000407144 PABPC3Q9H361 631 aaKnown RBP24.29■■□□□ 1.48
CUEDC1-202ENST00000407144 RGPD2P0DJD1 1756 aa24.29■■□□□ 1.48
CUEDC1-202ENST00000407144 EIF4E1BA6NMX2 242 aaKnown RBP24.29■■□□□ 1.48
CUEDC1-202ENST00000407144 PEX11AO75192 247 aa24.29■■□□□ 1.48
CUEDC1-202ENST00000407144 PENKP01210 267 aaPredicted RBP24.29■■□□□ 1.48
CUEDC1-202ENST00000407144 PDHA1P08559 390 aa24.29■■□□□ 1.48
CUEDC1-202ENST00000407144 CNGA2Q16280 664 aa24.29■■□□□ 1.48
CUEDC1-202ENST00000407144 TDRD12Q587J7 1177 aaKnown RBP24.29■■□□□ 1.48
CUEDC1-202ENST00000407144 PIGOQ8TEQ8 1089 aa24.29■■□□□ 1.48
CUEDC1-202ENST00000407144 FAM192AQ9GZU8 254 aa24.29■■□□□ 1.48
CUEDC1-202ENST00000407144 PRKAG3Q9UGI9 489 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms