RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 THPOP40225 353 aa11.75□□□□□ -0.53
FAM49A-202ENST00000406434 FOSBP53539 338 aa11.75□□□□□ -0.53
FAM49A-202ENST00000406434 ACTR2P61160 394 aa11.75□□□□□ -0.53
FAM49A-202ENST00000406434 NIPA1Q7RTP0 329 aa11.75□□□□□ -0.53
FAM49A-202ENST00000406434 HERVK_113Q902F9 699 aa11.75□□□□□ -0.53
FAM49A-202ENST00000406434 DDX27Q96GQ7 796 aaKnown RBP11.75□□□□□ -0.53
FAM49A-202ENST00000406434 ZNF577Q9BSK1 485 aa11.75□□□□□ -0.53
FAM49A-202ENST00000406434 MTIF3Q9H2K0 278 aaKnown RBP11.75□□□□□ -0.53
FAM49A-202ENST00000406434 SMARCAD1Q9H4L7 1026 aa11.75□□□□□ -0.53
FAM49A-202ENST00000406434 OCEL1Q9H607 264 aa11.75□□□□□ -0.53
FAM49A-202ENST00000406434 AZI2Q9H6S1 392 aa11.75□□□□□ -0.53
FAM49A-202ENST00000406434 GJB4Q9NTQ9 266 aa11.75□□□□□ -0.53
FAM49A-202ENST00000406434 ERAP1Q9NZ08 941 aa11.75□□□□□ -0.53
FAM49A-202ENST00000406434 NFASCO94856 1347 aa11.74□□□□□ -0.53
FAM49A-202ENST00000406434 RBAK-RBAKDNI3L0D1 243 aa11.74□□□□□ -0.53
FAM49A-202ENST00000406434 IPO5O00410 1097 aaKnown RBP11.74□□□□□ -0.53
FAM49A-202ENST00000406434 BACH1O14867 736 aa11.74□□□□□ -0.53
FAM49A-202ENST00000406434 ACTN1P12814 892 aa11.74□□□□□ -0.53
FAM49A-202ENST00000406434 RFC2P35250 354 aa11.74□□□□□ -0.53
FAM49A-202ENST00000406434 IGBP1P78318 339 aa11.74□□□□□ -0.53
FAM49A-202ENST00000406434 SMAD3P84022 425 aaKnown RBP11.74□□□□□ -0.53
FAM49A-202ENST00000406434 ZNF618Q5T7W0 954 aa11.74□□□□□ -0.53
FAM49A-202ENST00000406434 FAM109BQ6ICB4 259 aaPredicted RBP11.74□□□□□ -0.53
FAM49A-202ENST00000406434 GALNT17Q6IS24 598 aa11.74□□□□□ -0.53
FAM49A-202ENST00000406434 GPR153Q6NV75 609 aa11.74□□□□□ -0.53
FAM49A-202ENST00000406434 LRRC8DQ7L1W4 858 aa11.74□□□□□ -0.53
FAM49A-202ENST00000406434 TBCKQ8TEA7 893 aa11.74□□□□□ -0.53
FAM49A-202ENST00000406434 AFAP1L1Q8TED9 768 aa11.74□□□□□ -0.53
FAM49A-202ENST00000406434 CRYGNQ8WXF5 182 aa11.74□□□□□ -0.53
FAM49A-202ENST00000406434 WNT8BQ93098 351 aa11.74□□□□□ -0.53
FAM49A-202ENST00000406434 TMEM121BQ9BXQ6 578 aaPredicted RBP11.74□□□□□ -0.53
FAM49A-202ENST00000406434 CXXC1Q9P0U4 656 aaPredicted RBP11.74□□□□□ -0.53
FAM49A-202ENST00000406434 IGLV3-22A0A075B6J6 115 aa11.73□□□□□ -0.53
FAM49A-202ENST00000406434 CIITAP33076 1130 aa11.73□□□□□ -0.53
FAM49A-202ENST00000406434 STAT5BP51692 787 aa11.73□□□□□ -0.53
FAM49A-202ENST00000406434 USP11P51784 963 aa11.73□□□□□ -0.53
FAM49A-202ENST00000406434 PPFIA1Q13136 1202 aa11.73□□□□□ -0.53
FAM49A-202ENST00000406434 CAMK2BQ13554 666 aa11.73□□□□□ -0.53
FAM49A-202ENST00000406434 ZNF697Q5TEC3 545 aa11.73□□□□□ -0.53
FAM49A-202ENST00000406434 TRMT1LQ7Z2T5 733 aaKnown RBP11.73□□□□□ -0.53
FAM49A-202ENST00000406434 SERINC5Q86VE9 423 aa11.73□□□□□ -0.53
FAM49A-202ENST00000406434 WASF1Q92558 559 aa11.73□□□□□ -0.53
FAM49A-202ENST00000406434 GTF3C6Q969F1 213 aa11.73□□□□□ -0.53
FAM49A-202ENST00000406434 VWCEQ96DN2 955 aa11.73□□□□□ -0.53
FAM49A-202ENST00000406434 PCYT2Q99447 389 aa11.73□□□□□ -0.53
FAM49A-202ENST00000406434 PHF20Q9BVI0 1012 aa11.73□□□□□ -0.53
FAM49A-202ENST00000406434 TCEAL9Q9UHQ7 104 aa11.73□□□□□ -0.53
FAM49A-202ENST00000406434 LIMCH1Q9UPQ0 1083 aa11.73□□□□□ -0.53
FAM49A-202ENST00000406434 SLC4A7Q9Y6M7 1214 aa11.73□□□□□ -0.53
FAM49A-202ENST00000406434 STK36Q9NRP7 1315 aa11.72□□□□□ -0.53
FAM49A-202ENST00000406434 TET1Q8NFU7 2136 aa11.72□□□□□ -0.53
FAM49A-202ENST00000406434 CCDC194A0A1B0GVG4 234 aa11.72□□□□□ -0.53
FAM49A-202ENST00000406434 RSPH10B2B2RC85 870 aa11.72□□□□□ -0.53
FAM49A-202ENST00000406434 EDIL3O43854 480 aa11.72□□□□□ -0.53
FAM49A-202ENST00000406434 JAK2O60674 1132 aa11.72□□□□□ -0.53
FAM49A-202ENST00000406434 LGR5O75473 907 aa11.72□□□□□ -0.53
FAM49A-202ENST00000406434 CCNE2O96020 404 aa11.72□□□□□ -0.53
FAM49A-202ENST00000406434 PFKMP08237 780 aa11.72□□□□□ -0.53
FAM49A-202ENST00000406434 RSPH10BP0C881 870 aa11.72□□□□□ -0.53
FAM49A-202ENST00000406434 SETQ01105 290 aaPredicted RBP11.72□□□□□ -0.53
FAM49A-202ENST00000406434 NONOQ15233 471 aaKnown RBP eCLIP11.72□□□□□ -0.53
FAM49A-202ENST00000406434 NPY5RQ15761 445 aa11.72□□□□□ -0.53
FAM49A-202ENST00000406434 INF2Q27J81 1249 aa11.72□□□□□ -0.53
FAM49A-202ENST00000406434 TRIM71Q2Q1W2 868 aaKnown RBP11.72□□□□□ -0.53
FAM49A-202ENST00000406434 RASIP1Q5U651 963 aa11.72□□□□□ -0.53
FAM49A-202ENST00000406434 SWSAP1Q6NVH7 229 aa11.72□□□□□ -0.53
FAM49A-202ENST00000406434 NSUN7Q8NE18 718 aaKnown RBP11.72□□□□□ -0.53
FAM49A-202ENST00000406434 LMBR1Q8WVP7 490 aa11.72□□□□□ -0.53
FAM49A-202ENST00000406434 SEMA6BQ9H3T3 888 aa11.72□□□□□ -0.53
FAM49A-202ENST00000406434 UPF2Q9HAU5 1272 aaKnown RBP11.72□□□□□ -0.53
FAM49A-202ENST00000406434 TBC1D22BQ9NU19 505 aa11.72□□□□□ -0.53
FAM49A-202ENST00000406434 MTMR10Q9NXD2 777 aa11.72□□□□□ -0.53
FAM49A-202ENST00000406434 SAMM50Q9Y512 469 aa11.72□□□□□ -0.53
FAM49A-202ENST00000406434 SZT2Q5T011 3432 aa11.72□□□□□ -0.53
FAM49A-202ENST00000406434 NRCAMQ92823 1304 aa11.72□□□□□ -0.53
FAM49A-202ENST00000406434 LAMA2P24043 3122 aaKnown RBP11.71□□□□□ -0.53
FAM49A-202ENST00000406434 M0R2N6 131 aa11.71□□□□□ -0.53
FAM49A-202ENST00000406434 MSH4O15457 936 aa11.71□□□□□ -0.53
FAM49A-202ENST00000406434 DHX15O43143 795 aaKnown RBP11.71□□□□□ -0.53
FAM49A-202ENST00000406434 NBNO60934 754 aa11.71□□□□□ -0.53
FAM49A-202ENST00000406434 ATG7O95352 703 aa11.71□□□□□ -0.53
FAM49A-202ENST00000406434 CTSHP09668 335 aa11.71□□□□□ -0.53
FAM49A-202ENST00000406434 FDPSP14324 419 aaKnown RBP11.71□□□□□ -0.53
FAM49A-202ENST00000406434 INSRRP14616 1297 aa11.71□□□□□ -0.53
FAM49A-202ENST00000406434 PBX2P40425 430 aa11.71□□□□□ -0.53
FAM49A-202ENST00000406434 RABGGTBP53611 331 aa11.71□□□□□ -0.53
FAM49A-202ENST00000406434 GPNMBQ14956 572 aa11.71□□□□□ -0.53
FAM49A-202ENST00000406434 PLCB4Q15147 1175 aa11.71□□□□□ -0.53
FAM49A-202ENST00000406434 GRIK4Q16099 956 aa11.71□□□□□ -0.53
FAM49A-202ENST00000406434 LETM2Q2VYF4 491 aa11.71□□□□□ -0.53
FAM49A-202ENST00000406434 FAM160B1Q5W0V3 765 aa11.71□□□□□ -0.53
FAM49A-202ENST00000406434 MIS18BP1Q6P0N0 1132 aa11.71□□□□□ -0.53
FAM49A-202ENST00000406434 PDXDC2PQ6P474 469 aa11.71□□□□□ -0.53
FAM49A-202ENST00000406434 ABHD15Q6UXT9 468 aa11.71□□□□□ -0.53
FAM49A-202ENST00000406434 PLPPR4Q7Z2D5 763 aa11.71□□□□□ -0.53
FAM49A-202ENST00000406434 KRT25Q7Z3Z0 450 aa11.71□□□□□ -0.53
FAM49A-202ENST00000406434 CCDC83Q8IWF9 413 aa11.71□□□□□ -0.53
FAM49A-202ENST00000406434 CKAP2LQ8IYA6 745 aa11.71□□□□□ -0.53
FAM49A-202ENST00000406434 FAM177A1Q8N128 213 aaPredicted RBP11.71□□□□□ -0.53
FAM49A-202ENST00000406434 DAGLBQ8NCG7 672 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms