RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CD244Q9BZW8 370 aa6.76□□□□□ -1.33
HMGB1P13-201ENST00000406019 SMURF1Q9HCE7 757 aa6.76□□□□□ -1.33
HMGB1P13-201ENST00000406019 NDOR1Q9UHB4 597 aa6.76□□□□□ -1.33
HMGB1P13-201ENST00000406019 DSEQ9UL01 958 aa6.76□□□□□ -1.33
HMGB1P13-201ENST00000406019 SRPK3Q9UPE1 567 aa6.76□□□□□ -1.33
HMGB1P13-201ENST00000406019 OTOL1A6NHN0 477 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 EFCAB14O75071 495 aa6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 PYGMP11217 842 aa6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 COL6A1P12109 1028 aa6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 FAHP16930 419 aa6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 ZNF28P17035 718 aa6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 SDSP20132 328 aa6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 EVA1CP58658 441 aa6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 NKX3-2P78367 333 aa6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 GRIN1Q05586 938 aa6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 GPR19Q15760 415 aa6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 PAN2Q504Q3 1202 aaKnown RBP6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 FSTL4Q6MZW2 842 aa6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 KCTD1Q719H9 257 aa6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 C16orf59Q7L2K0 433 aa6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 BRAPQ7Z569 592 aa6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 ZNF761Q86XN6 746 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 DTX3Q8N9I9 347 aa6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 FBXW5Q969U6 566 aa6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 IPO9Q96P70 1041 aaKnown RBP6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 TARS2Q9BW92 718 aaKnown RBP6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 RTEL1Q9NZ71 1219 aa6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 MAGEC2Q9UBF1 373 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 SFMBT1Q9UHJ3 866 aa6.75□□□□□ -1.33
HMGB1P13-201ENST00000406019 TCRBV16S1A1N1A0A5B0 115 aa6.74□□□□□ -1.33
HMGB1P13-201ENST00000406019 NOBOXO60393 691 aa6.74□□□□□ -1.33
HMGB1P13-201ENST00000406019 PDE6AP16499 860 aa6.74□□□□□ -1.33
HMGB1P13-201ENST00000406019 NAT1P18440 290 aa6.74□□□□□ -1.33
HMGB1P13-201ENST00000406019 LACTBP83111 547 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P13-201ENST00000406019 NFKB2Q00653 900 aa6.74□□□□□ -1.33
HMGB1P13-201ENST00000406019 BRDTQ58F21 947 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P13-201ENST00000406019 ODR4Q5SWX8 454 aa6.74□□□□□ -1.33
HMGB1P13-201ENST00000406019 LRRTM3Q86VH5 581 aa6.74□□□□□ -1.33
HMGB1P13-201ENST00000406019 ZCCHC4Q9H5U6 513 aa6.74□□□□□ -1.33
HMGB1P13-201ENST00000406019 NTMQ9P121 344 aa6.74□□□□□ -1.33
HMGB1P13-201ENST00000406019 G3BP2Q9UN86 482 aaKnown RBP6.74□□□□□ -1.33
HMGB1P13-201ENST00000406019 THRAP3Q9Y2W1 955 aaKnown RBP6.74□□□□□ -1.33
HMGB1P13-201ENST00000406019 CCDC66A2RUB6 948 aa6.73□□□□□ -1.33
HMGB1P13-201ENST00000406019 FAM90A27PA6NNH2 459 aa6.73□□□□□ -1.33
HMGB1P13-201ENST00000406019 ALG1L2C9J202 215 aa6.73□□□□□ -1.33
HMGB1P13-201ENST00000406019 DNAJC8O75937 253 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P13-201ENST00000406019 EYA4O95677 639 aa6.73□□□□□ -1.33
HMGB1P13-201ENST00000406019 POU3F2P20265 443 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P13-201ENST00000406019 SARSP49591 514 aaKnown RBP6.73□□□□□ -1.33
HMGB1P13-201ENST00000406019 JAM2P57087 298 aa6.73□□□□□ -1.33
HMGB1P13-201ENST00000406019 SEC23AQ15436 765 aa6.73□□□□□ -1.33
HMGB1P13-201ENST00000406019 ARHGAP36Q6ZRI8 547 aa6.73□□□□□ -1.33
HMGB1P13-201ENST00000406019 JDP2Q8WYK2 163 aa6.73□□□□□ -1.33
HMGB1P13-201ENST00000406019 ZCCHC14Q8WYQ9 949 aaKnown RBP6.73□□□□□ -1.33
HMGB1P13-201ENST00000406019 DDX1Q92499 740 aaKnown RBP6.73□□□□□ -1.33
HMGB1P13-201ENST00000406019 YIPF4Q9BSR8 244 aa6.73□□□□□ -1.33
HMGB1P13-201ENST00000406019 CELF4Q9BZC1 486 aaKnown RBP6.73□□□□□ -1.33
HMGB1P13-201ENST00000406019 MCM8Q9UJA3 840 aa6.73□□□□□ -1.33
HMGB1P13-201ENST00000406019 SRGAP2CP0DJJ0 459 aa6.72□□□□□ -1.33
HMGB1P13-201ENST00000406019 KCNC1P48547 511 aa6.72□□□□□ -1.33
HMGB1P13-201ENST00000406019 MLLT6P55198 1093 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P13-201ENST00000406019 HSP90AB2PQ58FF8 381 aa6.72□□□□□ -1.33
HMGB1P13-201ENST00000406019 FIGNQ5HY92 759 aa6.72□□□□□ -1.33
HMGB1P13-201ENST00000406019 CD276Q5ZPR3 534 aa6.72□□□□□ -1.33
HMGB1P13-201ENST00000406019 HHIPL2Q6UWX4 724 aa6.72□□□□□ -1.33
HMGB1P13-201ENST00000406019 TMC5Q6UXY8 1006 aa6.72□□□□□ -1.33
HMGB1P13-201ENST00000406019 OVCH1Q7RTY7 1134 aa6.72□□□□□ -1.33
HMGB1P13-201ENST00000406019 OSTM1Q86WC4 334 aa6.72□□□□□ -1.33
HMGB1P13-201ENST00000406019 PTRH1Q86Y79 214 aaKnown RBP6.72□□□□□ -1.33
HMGB1P13-201ENST00000406019 NOSTRINQ8IVI9 506 aa6.72□□□□□ -1.33
HMGB1P13-201ENST00000406019 UBR7Q8N806 425 aa6.72□□□□□ -1.33
HMGB1P13-201ENST00000406019 ADAMTS17Q8TE56 1095 aa6.72□□□□□ -1.33
HMGB1P13-201ENST00000406019 ZSWIM3Q96MP5 696 aa6.72□□□□□ -1.33
HMGB1P13-201ENST00000406019 TMEM209Q96SK2 561 aa6.72□□□□□ -1.33
HMGB1P13-201ENST00000406019 CEP89Q96ST8 783 aa6.72□□□□□ -1.33
HMGB1P13-201ENST00000406019 CT47A1Q5JQC4 288 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P13-201ENST00000406019 FAM26FQ5R3K3 315 aa6.71□□□□□ -1.34
HMGB1P13-201ENST00000406019 FRMD5Q7Z6J6 570 aa6.71□□□□□ -1.34
HMGB1P13-201ENST00000406019 MBD6Q96DN6 1003 aa6.71□□□□□ -1.34
HMGB1P13-201ENST00000406019 YTHDC1Q96MU7 727 aaKnown RBP6.71□□□□□ -1.34
HMGB1P13-201ENST00000406019 SLC52A1Q9NWF4 448 aa6.71□□□□□ -1.34
HMGB1P13-201ENST00000406019 WASHC2CQ9Y4E1 1318 aa6.71□□□□□ -1.34
HMGB1P13-201ENST00000406019 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P13-201ENST00000406019 ZNF839A8K0R7 811 aa6.7□□□□□ -1.34
HMGB1P13-201ENST00000406019 SASH1O94885 1247 aa6.7□□□□□ -1.34
HMGB1P13-201ENST00000406019 NPTXRO95502 500 aa6.7□□□□□ -1.34
HMGB1P13-201ENST00000406019 C4BPAP04003 597 aaKnown RBP6.7□□□□□ -1.34
HMGB1P13-201ENST00000406019 PTPN1P18031 435 aaKnown RBP6.7□□□□□ -1.34
HMGB1P13-201ENST00000406019 MECP2P51608 486 aaKnown RBP6.7□□□□□ -1.34
HMGB1P13-201ENST00000406019 TTLL7Q6ZT98 887 aa6.7□□□□□ -1.34
HMGB1P13-201ENST00000406019 STRA8Q7Z7C7 330 aa6.7□□□□□ -1.34
HMGB1P13-201ENST00000406019 PPM1KQ8N3J5 372 aa6.7□□□□□ -1.34
HMGB1P13-201ENST00000406019 MAGEB10Q96LZ2 347 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P13-201ENST00000406019 DLL4Q9NR61 685 aa6.7□□□□□ -1.34
HMGB1P13-201ENST00000406019 CATSPERZQ9NTU4 200 aa6.7□□□□□ -1.34
HMGB1P13-201ENST00000406019 COQ6Q9Y2Z9 468 aa6.7□□□□□ -1.34
HMGB1P13-201ENST00000406019 NUB1Q9Y5A7 615 aa6.7□□□□□ -1.34
HMGB1P13-201ENST00000406019 DUSP10Q9Y6W6 482 aa6.7□□□□□ -1.34
HMGB1P13-201ENST00000406019 DBPQ10586 325 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms