RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 NELFCDQ8IXH7 590 aa32.13■■■□□ 2.73
CSNK1E-205ENST00000405675 POLD4Q9HCU8 107 aa32.13■■■□□ 2.73
CSNK1E-205ENST00000405675 DDX39AO00148 427 aaKnown RBP32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 TPM1P09493 284 aa32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 BCRP11274 1271 aa32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 TRIM14Q14142 442 aa32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 TMEM132BQ14DG7 1078 aa32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 TKFCQ3LXA3 575 aa32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 TSG101Q99816 390 aa32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 RNF146Q9NTX7 359 aa32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 MAP3K20Q9NYL2 800 aaKnown RBP32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 KCNH4Q9UQ05 1017 aa32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 RSPH10B2B2RC85 870 aa32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 RSPH10BP0C881 870 aa32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 CASP5P51878 434 aa32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 FOXR2Q6PJQ5 311 aa32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 RAD9BQ6WBX8 426 aa32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 NSMFQ6X4W1 530 aa32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 RNF207Q6ZRF8 634 aa32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 SFR1Q86XK3 245 aa32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 CCDC51Q96ER9 411 aa32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 RIT2Q99578 217 aa32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 DESI2Q9BSY9 194 aa32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 ZNF214Q9UL59 606 aaPredicted RBP32.12■■■□□ 2.73
CSNK1E-205ENST00000405675 FECHP22830 423 aa32.11■■■□□ 2.73
CSNK1E-205ENST00000405675 ABHD10Q9NUJ1 306 aa32.11■■■□□ 2.73
CSNK1E-205ENST00000405675 CCP110O43303 1012 aa32.11■■■□□ 2.73
CSNK1E-205ENST00000405675 KLK7P49862 253 aa32.11■■■□□ 2.73
CSNK1E-205ENST00000405675 TBC1D8BQ0IIM8 1120 aa32.11■■■□□ 2.73
CSNK1E-205ENST00000405675 PGM5Q15124 567 aa32.11■■■□□ 2.73
CSNK1E-205ENST00000405675 EPHA7Q15375 998 aa32.11■■■□□ 2.73
CSNK1E-205ENST00000405675 SNRNP48Q6IEG0 339 aaKnown RBP32.11■■■□□ 2.73
CSNK1E-205ENST00000405675 RINT1Q6NUQ1 792 aa32.11■■■□□ 2.73
CSNK1E-205ENST00000405675 NIPA1Q7RTP0 329 aa32.11■■■□□ 2.73
CSNK1E-205ENST00000405675 PNMA2Q9UL42 364 aa32.11■■■□□ 2.73
CSNK1E-205ENST00000405675 COL11A1P12107 1806 aaPredicted RBP32.1■■■□□ 2.73
CSNK1E-205ENST00000405675 TTC26A0AVF1 554 aa32.1■■■□□ 2.73
CSNK1E-205ENST00000405675 RASSF10A6NK89 507 aa32.1■■■□□ 2.73
CSNK1E-205ENST00000405675 DHX15O43143 795 aaKnown RBP32.1■■■□□ 2.73
CSNK1E-205ENST00000405675 GJA5P36382 358 aa32.1■■■□□ 2.73
CSNK1E-205ENST00000405675 ITGB3BPQ13352 177 aaPredicted RBP32.1■■■□□ 2.73
CSNK1E-205ENST00000405675 SAMD3Q8N6K7 520 aa32.1■■■□□ 2.73
CSNK1E-205ENST00000405675 PROCA1Q8NCQ7 364 aaPredicted RBP32.1■■■□□ 2.73
CSNK1E-205ENST00000405675 SLC10A4Q96EP9 437 aa32.1■■■□□ 2.73
CSNK1E-205ENST00000405675 NAA15Q9BXJ9 866 aaKnown RBP32.1■■■□□ 2.73
CSNK1E-205ENST00000405675 KCTD10Q9H3F6 313 aa32.1■■■□□ 2.73
CSNK1E-205ENST00000405675 AGO4Q9HCK5 861 aaKnown RBP32.1■■■□□ 2.73
CSNK1E-205ENST00000405675 JADE2Q9NQC1 790 aa32.1■■■□□ 2.73
CSNK1E-205ENST00000405675 MYPNQ86TC9 1320 aa32.1■■■□□ 2.73
CSNK1E-205ENST00000405675 KCTD17Q8N5Z5 321 aa32.09■■■□□ 2.73
CSNK1E-205ENST00000405675 PAXBP1Q9Y5B6 917 aa32.09■■■□□ 2.73
CSNK1E-205ENST00000405675 FGFR1OPO95684 399 aaKnown RBP32.09■■■□□ 2.73
CSNK1E-205ENST00000405675 KRT9P35527 623 aa32.09■■■□□ 2.73
CSNK1E-205ENST00000405675 OAZ1P54368 228 aa32.09■■■□□ 2.73
CSNK1E-205ENST00000405675 BAATQ14032 418 aaPredicted RBP32.09■■■□□ 2.73
CSNK1E-205ENST00000405675 SYCP1Q15431 976 aa32.09■■■□□ 2.73
CSNK1E-205ENST00000405675 ZSCAN12O43309 604 aa32.08■■■□□ 2.73
CSNK1E-205ENST00000405675 RMDN3Q96TC7 470 aa32.08■■■□□ 2.73
CSNK1E-205ENST00000405675 PXMP2Q9NR77 195 aa32.08■■■□□ 2.73
CSNK1E-205ENST00000405675 DCAF8L1A6NGE4 600 aa32.08■■■□□ 2.73
CSNK1E-205ENST00000405675 MYCLP12524 364 aaPredicted RBP32.08■■■□□ 2.73
CSNK1E-205ENST00000405675 VWA3BQ502W6 1294 aa32.08■■■□□ 2.73
CSNK1E-205ENST00000405675 BANK1Q8NDB2 785 aa32.08■■■□□ 2.73
CSNK1E-205ENST00000405675 PDCD2LQ9BRP1 358 aa32.08■■■□□ 2.73
CSNK1E-205ENST00000405675 KIF2AO00139 706 aaPredicted RBP32.07■■■□□ 2.72
CSNK1E-205ENST00000405675 ERVK-24P63145 666 aa32.07■■■□□ 2.72
CSNK1E-205ENST00000405675 C1orf186Q6ZWK4 172 aa32.07■■■□□ 2.72
CSNK1E-205ENST00000405675 LOC285556D6RIA3 1793 aa32.07■■■□□ 2.72
CSNK1E-205ENST00000405675 ATP2A1O14983 1001 aa32.06■■■□□ 2.72
CSNK1E-205ENST00000405675 ERCC3P19447 782 aa32.06■■■□□ 2.72
CSNK1E-205ENST00000405675 FKBP3Q00688 224 aaKnown RBP32.06■■■□□ 2.72
CSNK1E-205ENST00000405675 MOGSQ13724 837 aa32.06■■■□□ 2.72
CSNK1E-205ENST00000405675 PLS1Q14651 629 aa32.06■■■□□ 2.72
CSNK1E-205ENST00000405675 EPM2AIP1Q7L775 607 aaPredicted RBP32.06■■■□□ 2.72
CSNK1E-205ENST00000405675 LXNQ9BS40 222 aa32.06■■■□□ 2.72
CSNK1E-205ENST00000405675 PEX10O60683 326 aa32.06■■■□□ 2.72
CSNK1E-205ENST00000405675 GTF2F1P35269 517 aaKnown RBP eCLIP32.06■■■□□ 2.722e-9■■■■■ 41.8
CSNK1E-205ENST00000405675 HOXD13P35453 343 aa32.06■■■□□ 2.72
CSNK1E-205ENST00000405675 MTMR1Q13613 665 aa32.06■■■□□ 2.72
CSNK1E-205ENST00000405675 TRIM65Q6PJ69 517 aa32.06■■■□□ 2.72
CSNK1E-205ENST00000405675 SYT10Q6XYQ8 523 aa32.06■■■□□ 2.72
CSNK1E-205ENST00000405675 TEX13BQ9BXU2 312 aa32.06■■■□□ 2.72
CSNK1E-205ENST00000405675 TTYH3Q9C0H2 523 aa32.06■■■□□ 2.72
CSNK1E-205ENST00000405675 CAPN11Q9UMQ6 739 aa32.06■■■□□ 2.72
CSNK1E-205ENST00000405675 MYBP10242 640 aa32.05■■■□□ 2.72
CSNK1E-205ENST00000405675 MUTP22033 750 aa32.05■■■□□ 2.72
CSNK1E-205ENST00000405675 MAN2A1Q16706 1144 aa32.05■■■□□ 2.72
CSNK1E-205ENST00000405675 TSC1Q92574 1164 aa32.05■■■□□ 2.72
CSNK1E-205ENST00000405675 NACC1Q96RE7 527 aa32.05■■■□□ 2.72
CSNK1E-205ENST00000405675 ERGIC2Q96RQ1 377 aa32.05■■■□□ 2.72
CSNK1E-205ENST00000405675 GBA2Q9HCG7 927 aaPredicted RBP32.05■■■□□ 2.72
CSNK1E-205ENST00000405675 SFI1A8K8P3 1242 aa32.05■■■□□ 2.72
CSNK1E-205ENST00000405675 MIER3Q7Z3K6 550 aa32.05■■■□□ 2.72
CSNK1E-205ENST00000405675 NDST4Q9H3R1 872 aa32.05■■■□□ 2.72
CSNK1E-205ENST00000405675 AGTPBP1Q9UPW5 1226 aa32.05■■■□□ 2.72
CSNK1E-205ENST00000405675 TBCAO75347 108 aaKnown RBP32.04■■■□□ 2.72
CSNK1E-205ENST00000405675 CELF2O95319 508 aaKnown RBP32.04■■■□□ 2.72
CSNK1E-205ENST00000405675 ARHGEF16Q5VV41 709 aa32.04■■■□□ 2.72
CSNK1E-205ENST00000405675 KIF20AO95235 890 aa32.03■■■□□ 2.72
CSNK1E-205ENST00000405675 FKBP15Q5T1M5 1219 aa32.03■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms