RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 NPR1P16066 1061 aa12.19□□□□□ -0.46
SCFD2-202ENST00000401642 TUBB2AQ13885 445 aa12.19□□□□□ -0.46
SCFD2-202ENST00000401642 COG2Q14746 738 aa12.19□□□□□ -0.46
SCFD2-202ENST00000401642 ASIC2Q16515 512 aa12.19□□□□□ -0.46
SCFD2-202ENST00000401642 NAA35Q5VZE5 725 aa12.19□□□□□ -0.46
SCFD2-202ENST00000401642 C8orf74Q6P047 294 aa12.19□□□□□ -0.46
SCFD2-202ENST00000401642 SIAH1Q8IUQ4 282 aa12.19□□□□□ -0.46
SCFD2-202ENST00000401642 TUBB2BQ9BVA1 445 aa12.19□□□□□ -0.46
SCFD2-202ENST00000401642 NT5C3AQ9H0P0 336 aa12.19□□□□□ -0.46
SCFD2-202ENST00000401642 FBXO28Q9NVF7 368 aa12.19□□□□□ -0.46
SCFD2-202ENST00000401642 ARMCX3Q9UH62 379 aaPredicted RBP12.19□□□□□ -0.46
SCFD2-202ENST00000401642 CHORDC1Q9UHD1 332 aaPredicted RBP12.19□□□□□ -0.46
SCFD2-202ENST00000401642 LCMT1Q9UIC8 334 aa12.19□□□□□ -0.46
SCFD2-202ENST00000401642 DDX60LQ5H9U9 1706 aaKnown RBP12.19□□□□□ -0.46
SCFD2-202ENST00000401642 SORBS3O60504 671 aa12.19□□□□□ -0.46
SCFD2-202ENST00000401642 ABCB4P21439 1286 aa12.19□□□□□ -0.46
SCFD2-202ENST00000401642 GUCY2DQ02846 1103 aa12.19□□□□□ -0.46
SCFD2-202ENST00000401642 RBM26Q5T8P6 1007 aaKnown RBP12.19□□□□□ -0.46
SCFD2-202ENST00000401642 CPXCR1Q8N123 301 aa12.19□□□□□ -0.46
SCFD2-202ENST00000401642 AP1M1Q9BXS5 423 aa12.19□□□□□ -0.46
SCFD2-202ENST00000401642 COL22A1Q8NFW1 1626 aaPredicted RBP12.19□□□□□ -0.46
SCFD2-202ENST00000401642 KCNK3O14649 394 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 TRIM66O15016 1216 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 C21orf2O43822 256 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 PRPF4BQ13523 1007 aaKnown RBP12.18□□□□□ -0.46
SCFD2-202ENST00000401642 MAP9Q49MG5 647 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 TSGA10Q9BZW7 698 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 LRRC27Q9C0I9 530 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 ACBD3Q9H3P7 528 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 GOLGA6BA6NDN3 693 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 BMP3P12645 472 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 ALDH1B1P30837 517 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 USP8P40818 1118 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 ATP1A2P50993 1020 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 HLTFQ14527 1009 aaKnown RBP eCLIP12.18□□□□□ -0.46
SCFD2-202ENST00000401642 ARHGAP44Q17R89 818 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 SYDE2Q5VT97 1194 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 CCNI2Q6ZMN8 369 aaPredicted RBP12.18□□□□□ -0.46
SCFD2-202ENST00000401642 HNRNPLLQ8WVV9 542 aaKnown RBP12.18□□□□□ -0.46
SCFD2-202ENST00000401642 TLR10Q9BXR5 811 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.18□□□□□ -0.46
SCFD2-202ENST00000401642 EPB41L5Q9HCM4 733 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 HPCAL4Q9UM19 191 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 NFU1Q9UMS0 254 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 WNK3Q9BYP7 1800 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 LAMB1P07942 1786 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 NAV1Q8NEY1 1877 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 MSH4O15457 936 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 GFPT2O94808 682 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 TRIM49P0CI25 452 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 TRIM49CP0CI26 452 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 PPP1R2P41236 205 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 CLK2P49760 499 aaKnown RBP12.18□□□□□ -0.46
SCFD2-202ENST00000401642 PTK2Q05397 1052 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 DGKZQ13574 1117 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 HGSNATQ68CP4 663 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 RUFY1Q96T51 708 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 UBXN6Q9BZV1 441 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 TRIM31Q9BZY9 425 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 SAMM50Q9Y512 469 aa12.18□□□□□ -0.46
SCFD2-202ENST00000401642 MYH1P12882 1939 aa12.17□□□□□ -0.46
SCFD2-202ENST00000401642 PPIP5K2O43314 1243 aa12.17□□□□□ -0.46
SCFD2-202ENST00000401642 AKAP3O75969 853 aa12.17□□□□□ -0.46
SCFD2-202ENST00000401642 CLSTN1O94985 981 aa12.17□□□□□ -0.46
SCFD2-202ENST00000401642 FAM13AO94988 1023 aa12.17□□□□□ -0.46
SCFD2-202ENST00000401642 XRCC5P13010 732 aaKnown RBP12.17□□□□□ -0.46
SCFD2-202ENST00000401642 SMARCA1P28370 1054 aa12.17□□□□□ -0.46
SCFD2-202ENST00000401642 GIT2Q14161 759 aa12.17□□□□□ -0.46
SCFD2-202ENST00000401642 NLGN1Q8N2Q7 840 aa12.17□□□□□ -0.46
SCFD2-202ENST00000401642 SH2D3CQ8N5H7 860 aa12.17□□□□□ -0.46
SCFD2-202ENST00000401642 ERMNQ8TAM6 284 aa12.17□□□□□ -0.46
SCFD2-202ENST00000401642 DYDC2Q96IM9 177 aa12.17□□□□□ -0.46
SCFD2-202ENST00000401642 PCIF1Q9H4Z3 704 aa12.17□□□□□ -0.46
SCFD2-202ENST00000401642 KDM3AQ9Y4C1 1321 aa12.17□□□□□ -0.46
SCFD2-202ENST00000401642 CEP104O60308 925 aa12.17□□□□□ -0.46
SCFD2-202ENST00000401642 LRRN2O75325 713 aa12.17□□□□□ -0.46
SCFD2-202ENST00000401642 SF3A3Q12874 501 aaKnown RBP eCLIP12.17□□□□□ -0.46
SCFD2-202ENST00000401642 EXOC3L4Q17RC7 722 aa12.17□□□□□ -0.46
SCFD2-202ENST00000401642 KIAA1755Q5JYT7 1200 aa12.17□□□□□ -0.46
SCFD2-202ENST00000401642 KLHDC7AQ5VTJ3 777 aa12.17□□□□□ -0.46
SCFD2-202ENST00000401642 HAUS3Q68CZ6 603 aa12.17□□□□□ -0.46
SCFD2-202ENST00000401642 RABGAP1Q9Y3P9 1069 aa12.17□□□□□ -0.46
SCFD2-202ENST00000401642 A0A1W2PQJ5 194 aa12.16□□□□□ -0.46
SCFD2-202ENST00000401642 H0YIN7 160 aa12.16□□□□□ -0.46
SCFD2-202ENST00000401642 SYF2O95926 243 aaKnown RBP12.16□□□□□ -0.46
SCFD2-202ENST00000401642 SPATA31C1P0DKV0 1188 aa12.16□□□□□ -0.46
SCFD2-202ENST00000401642 CARSP49589 748 aaKnown RBP12.16□□□□□ -0.46
SCFD2-202ENST00000401642 MKRN4PQ13434 485 aaPredicted RBP12.16□□□□□ -0.46
SCFD2-202ENST00000401642 BANK1Q8NDB2 785 aa12.16□□□□□ -0.46
SCFD2-202ENST00000401642 AFAP1L1Q8TED9 768 aa12.16□□□□□ -0.46
SCFD2-202ENST00000401642 U2AF1L4Q8WU68 220 aaKnown RBP12.16□□□□□ -0.46
SCFD2-202ENST00000401642 CCDC17Q96LX7 622 aa12.16□□□□□ -0.46
SCFD2-202ENST00000401642 EIF2AK1Q9BQI3 630 aaKnown RBP12.16□□□□□ -0.46
SCFD2-202ENST00000401642 GLIS2Q9BZE0 524 aaPredicted RBP12.16□□□□□ -0.46
SCFD2-202ENST00000401642 FAM107BQ9H098 131 aa12.16□□□□□ -0.46
SCFD2-202ENST00000401642 AJAP1Q9UKB5 411 aaPredicted RBP12.16□□□□□ -0.46
SCFD2-202ENST00000401642 TISP43B9A030 160 aa12.16□□□□□ -0.46
SCFD2-202ENST00000401642 hCG_1984214I3L0E3 225 aa12.16□□□□□ -0.46
SCFD2-202ENST00000401642 GLI1P08151 1106 aa12.16□□□□□ -0.46
SCFD2-202ENST00000401642 FAM153BP0C7A2 387 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms