RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 PLS3P13797 630 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 IQCB1Q15051 598 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 KLC2Q9H0B6 622 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 ANTXR1Q9H6X2 564 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 CYP26B1Q9NR63 512 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 TARSL2A2RTX5 802 aaKnown RBP9□□□□□ -0.97
SPTLC3-201ENST00000399002 KCNQ3O43525 872 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 APBA3O96018 575 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 PLCG1P19174 1290 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 MXI1P50539 228 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 GRAPQ13588 217 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 CLEC4GQ6UXB4 293 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 SYDE1Q6ZW31 735 aaPredicted RBP9□□□□□ -0.97
SPTLC3-201ENST00000399002 ZNF589Q86UQ0 364 aaPredicted RBP9□□□□□ -0.97
SPTLC3-201ENST00000399002 GRAPLQ8TC17 118 aaPredicted RBP9□□□□□ -0.97
SPTLC3-201ENST00000399002 PIGSQ96S52 555 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 TACO1Q9BSH4 297 aaKnown RBP9□□□□□ -0.97
SPTLC3-201ENST00000399002 TIPINQ9BVW5 301 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 PARD6BQ9BYG5 372 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 ABCB11O95342 1321 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 SOWAHDA6NJG2 315 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 ENOSF1Q7L5Y1 443 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 ST13P4Q8IZP2 240 aaPredicted RBP9□□□□□ -0.97
SPTLC3-201ENST00000399002 SEL1LQ9UBV2 794 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 FEM1BQ9UK73 627 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 CLTCL1P53675 1640 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 NRKQ7Z2Y5 1582 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 FAM187AA6NFU0 413 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 LGALS16A8MUM7 142 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 ERCC3P19447 782 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 MKRN3Q13064 507 aaKnown RBP9□□□□□ -0.97
SPTLC3-201ENST00000399002 IFT88Q13099 833 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 RSBN1LQ6PCB5 846 aaPredicted RBP9□□□□□ -0.97
SPTLC3-201ENST00000399002 PSPC1Q8WXF1 523 aaKnown RBP9□□□□□ -0.97
SPTLC3-201ENST00000399002 RAD54LQ92698 747 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 NUDCD1Q96RS6 583 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 PAGR1Q9BTK6 254 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 GINS2Q9Y248 185 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 PFASO15067 1338 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 EXOC1LA0A1B0GW35 172 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 CTIFO43310 598 aaKnown RBP9□□□□□ -0.97
SPTLC3-201ENST00000399002 HNRNPCL1O60812 293 aaKnown RBP9□□□□□ -0.97
SPTLC3-201ENST00000399002 TBXAS1P24557 533 aaPredicted RBP9□□□□□ -0.97
SPTLC3-201ENST00000399002 COPB2P35606 906 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 ARL4CP56559 192 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 ALX1Q15699 326 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 SULF1Q8IWU6 871 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 PLCD3Q8N3E9 789 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 LCORLQ8N3X6 602 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 CCDC127Q96BQ5 260 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 TRIM62Q9BVG3 475 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 RPF1Q9H9Y2 349 aaKnown RBP9□□□□□ -0.97
SPTLC3-201ENST00000399002 TRIM33Q9UPN9 1127 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 TULP4Q9NRJ4 1543 aa9□□□□□ -0.97
SPTLC3-201ENST00000399002 KPNA7A9QM74 516 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 SPARCL1Q14515 664 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 CASP8Q14790 479 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 PFKFB3Q16875 520 aaPredicted RBP8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 TRIM72Q6ZMU5 477 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 TMEM179Q6ZVK1 233 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 AKT3Q9Y243 479 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 TAF1BQ53T94 588 aaPredicted RBP8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 NLRP10Q86W26 655 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 OSBPL5Q9H0X9 879 aaPredicted RBP8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 UPF3AQ9H1J1 476 aaKnown RBP8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 SERPINB13Q9UIV8 391 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 ATP8A1Q9Y2Q0 1164 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 ADGRB3O60242 1522 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 ESYT2A0FGR8 921 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 H7C1W4 665 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 KIAA0391O15091 583 aaKnown RBP8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 GFPT2O94808 682 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 NPR1P16066 1061 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 PRELPP51888 382 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 PLTPP55058 493 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 PHEXP78562 749 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 DRP2Q13474 957 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 KRT31Q15323 416 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 USPL1Q5W0Q7 1092 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 CLEC17AQ6ZS10 378 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 CRLF3Q8IUI8 442 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 SIX6OS1Q8N1H7 587 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 CEP170P1Q96L14 293 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 GDAP1L1Q96MZ0 367 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 EDEM3Q9BZQ6 932 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 TRPV6Q9H1D0 765 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 TLR7Q9NYK1 1049 aaKnown RBP8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 WDR64B1ANS9 1081 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 PPP1R12AO14974 1030 aaPredicted RBP8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 CTNND1O60716 968 aaKnown RBP8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 KRT37O76014 449 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 NBPF3Q9H094 633 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 ATP6V0A4Q9HBG4 840 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 ASNSD1Q9NWL6 643 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 SLC8A2Q9UPR5 921 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 MADDQ8WXG6 1647 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 GNGT2O14610 69 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 ZSCAN20P17040 1043 aaPredicted RBP8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 SFNP31947 248 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 CLCN6P51797 869 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms