RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 SH3GL2Q99962 352 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 MXD3Q9BW11 206 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 GANQ9H2C0 597 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 PCDHGC5Q9Y5F6 944 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 FOCADQ5VW36 1801 aa14.38□□□□□ -0.11
PRAME-201ENST00000398741 CYP3A7-CYP3A51PA0A087WV96 503 aa14.38□□□□□ -0.11
PRAME-201ENST00000398741 CYP3A7P24462 503 aa14.38□□□□□ -0.11
PRAME-201ENST00000398741 GUCY2DQ02846 1103 aa14.38□□□□□ -0.11
PRAME-201ENST00000398741 PRR16Q569H4 304 aa14.38□□□□□ -0.11
PRAME-201ENST00000398741 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.38□□□□□ -0.11
PRAME-201ENST00000398741 DCAF4Q8WV16 495 aa14.38□□□□□ -0.11
PRAME-201ENST00000398741 CAPS2Q9BXY5 557 aa14.38□□□□□ -0.11
PRAME-201ENST00000398741 PACSIN1Q9BY11 444 aa14.38□□□□□ -0.11
PRAME-201ENST00000398741 EPB41L5Q9HCM4 733 aa14.38□□□□□ -0.11
PRAME-201ENST00000398741 ARMCX3Q9UH62 379 aaPredicted RBP14.38□□□□□ -0.11
PRAME-201ENST00000398741 DNM3Q9UQ16 869 aa14.38□□□□□ -0.11
PRAME-201ENST00000398741 CALUO43852 315 aaPredicted RBP14.38□□□□□ -0.11
PRAME-201ENST00000398741 AFPP02771 609 aaKnown RBP14.38□□□□□ -0.11
PRAME-201ENST00000398741 ARHGAP4P98171 946 aa14.38□□□□□ -0.11
PRAME-201ENST00000398741 DOK7Q18PE1 504 aa14.38□□□□□ -0.11
PRAME-201ENST00000398741 SKIDA1Q1XH10 827 aa14.38□□□□□ -0.11
PRAME-201ENST00000398741 ARSHQ5FYA8 562 aa14.38□□□□□ -0.11
PRAME-201ENST00000398741 C10orf76Q5T2E6 689 aa14.38□□□□□ -0.11
PRAME-201ENST00000398741 SLFN13Q68D06 897 aa14.38□□□□□ -0.11
PRAME-201ENST00000398741 MOXD1Q6UVY6 613 aa14.38□□□□□ -0.11
PRAME-201ENST00000398741 IFT81Q8WYA0 676 aa14.38□□□□□ -0.11
PRAME-201ENST00000398741 KRT12Q99456 494 aa14.38□□□□□ -0.11
PRAME-201ENST00000398741 GDF3Q9NR23 364 aa14.38□□□□□ -0.11
PRAME-201ENST00000398741 PACSIN2Q9UNF0 486 aaPredicted RBP14.38□□□□□ -0.11
PRAME-201ENST00000398741 GLI1P08151 1106 aa14.37□□□□□ -0.11
PRAME-201ENST00000398741 EPB41P11171 864 aaKnown RBP14.37□□□□□ -0.11
PRAME-201ENST00000398741 EEF2P13639 858 aaKnown RBP14.37□□□□□ -0.11
PRAME-201ENST00000398741 TNNC1P63316 161 aa14.37□□□□□ -0.11
PRAME-201ENST00000398741 DDR1Q08345 913 aa14.37□□□□□ -0.11
PRAME-201ENST00000398741 PABPC4Q13310 644 aaKnown RBP eCLIP14.37□□□□□ -0.114e-75■□□□□ 10.5
PRAME-201ENST00000398741 IFI16Q16666 785 aaKnown RBP14.37□□□□□ -0.11
PRAME-201ENST00000398741 KNOP1Q1ED39 458 aaKnown RBP14.37□□□□□ -0.11
PRAME-201ENST00000398741 DNAJC21Q5F1R6 531 aaKnown RBP14.37□□□□□ -0.11
PRAME-201ENST00000398741 HHIPL2Q6UWX4 724 aa14.37□□□□□ -0.11
PRAME-201ENST00000398741 FRMD5Q7Z6J6 570 aa14.37□□□□□ -0.11
PRAME-201ENST00000398741 CATSPER3Q86XQ3 398 aa14.37□□□□□ -0.11
PRAME-201ENST00000398741 MBOAT7Q96N66 472 aa14.37□□□□□ -0.11
PRAME-201ENST00000398741 EHD4Q9H223 541 aa14.37□□□□□ -0.11
PRAME-201ENST00000398741 NFU1Q9UMS0 254 aa14.37□□□□□ -0.11
PRAME-201ENST00000398741 MEIS1O00470 390 aa14.37□□□□□ -0.11
PRAME-201ENST00000398741 ACTN1P12814 892 aa14.37□□□□□ -0.11
PRAME-201ENST00000398741 XRCC5P13010 732 aaKnown RBP14.37□□□□□ -0.11
PRAME-201ENST00000398741 CARSP49589 748 aaKnown RBP14.37□□□□□ -0.11
PRAME-201ENST00000398741 IRAK1P51617 712 aa14.37□□□□□ -0.11
PRAME-201ENST00000398741 CASP5P51878 434 aa14.37□□□□□ -0.11
PRAME-201ENST00000398741 NFIAQ12857 509 aa14.37□□□□□ -0.11
PRAME-201ENST00000398741 GIT2Q14161 759 aa14.37□□□□□ -0.11
PRAME-201ENST00000398741 RPS6KA1Q15418 735 aa14.37□□□□□ -0.11
PRAME-201ENST00000398741 CFAP58Q5T655 872 aa14.37□□□□□ -0.11
PRAME-201ENST00000398741 MCTP2Q6DN12 878 aa14.37□□□□□ -0.11
PRAME-201ENST00000398741 SFR1Q86XK3 245 aa14.37□□□□□ -0.11
PRAME-201ENST00000398741 CAMKK2Q96RR4 588 aa14.37□□□□□ -0.11
PRAME-201ENST00000398741 TRAF3IP3Q9Y228 551 aa14.37□□□□□ -0.11
PRAME-201ENST00000398741 BZW2Q9Y6E2 419 aaKnown RBP14.37□□□□□ -0.11
PRAME-201ENST00000398741 ESYT3A0FGR9 886 aa14.36□□□□□ -0.11
PRAME-201ENST00000398741 SPDYE3A6NKU9 549 aa14.36□□□□□ -0.11
PRAME-201ENST00000398741 SLURP2P0DP57 97 aa14.36□□□□□ -0.11
PRAME-201ENST00000398741 SLC9A1P19634 815 aa14.36□□□□□ -0.11
PRAME-201ENST00000398741 RNASE9P60153 205 aaKnown RBP14.36□□□□□ -0.11
PRAME-201ENST00000398741 PTK2Q05397 1052 aa14.36□□□□□ -0.11
PRAME-201ENST00000398741 EN1Q05925 392 aaPredicted RBP14.36□□□□□ -0.11
PRAME-201ENST00000398741 EXOC3L4Q17RC7 722 aa14.36□□□□□ -0.11
PRAME-201ENST00000398741 DCAF17Q5H9S7 520 aaPredicted RBP14.36□□□□□ -0.11
PRAME-201ENST00000398741 APOBEC3HQ6NTF7 200 aaKnown RBP14.36□□□□□ -0.11
PRAME-201ENST00000398741 ILDR2Q71H61 639 aa14.36□□□□□ -0.11
PRAME-201ENST00000398741 COL23A1Q86Y22 540 aaPredicted RBP14.36□□□□□ -0.11
PRAME-201ENST00000398741 ETNPPLQ8TBG4 499 aa14.36□□□□□ -0.11
PRAME-201ENST00000398741 CCDC43Q96MW1 224 aaKnown RBP14.36□□□□□ -0.11
PRAME-201ENST00000398741 ZIM3Q96PE6 472 aa14.36□□□□□ -0.11
PRAME-201ENST00000398741 REEP2Q9BRK0 252 aa14.36□□□□□ -0.11
PRAME-201ENST00000398741 AMNQ9BXJ7 453 aa14.36□□□□□ -0.11
PRAME-201ENST00000398741 PLCB1Q9NQ66 1216 aa14.36□□□□□ -0.11
PRAME-201ENST00000398741 STK24Q9Y6E0 443 aa14.36□□□□□ -0.11
PRAME-201ENST00000398741 BTNL10A8MVZ5 291 aa14.35□□□□□ -0.11
PRAME-201ENST00000398741 POLRMTO00411 1230 aaKnown RBP14.35□□□□□ -0.11
PRAME-201ENST00000398741 MEIS2O14770 477 aa14.35□□□□□ -0.11
PRAME-201ENST00000398741 TBX3O15119 743 aa14.35□□□□□ -0.11
PRAME-201ENST00000398741 UCHL3P15374 230 aa14.35□□□□□ -0.11
PRAME-201ENST00000398741 RPA1P27694 616 aa14.35□□□□□ -0.11
PRAME-201ENST00000398741 NOP2P46087 812 aaKnown RBP14.35□□□□□ -0.11
PRAME-201ENST00000398741 GNGT1P63211 74 aa14.35□□□□□ -0.11
PRAME-201ENST00000398741 IKQ13123 557 aaPredicted RBP14.35□□□□□ -0.11
PRAME-201ENST00000398741 CERKLQ49MI3 558 aaPredicted RBP14.35□□□□□ -0.11
PRAME-201ENST00000398741 TCERG1LQ5VWI1 586 aa14.35□□□□□ -0.11
PRAME-201ENST00000398741 SYT2Q8N9I0 419 aaPredicted RBP14.35□□□□□ -0.11
PRAME-201ENST00000398741 INPP4AQ96PE3 977 aaPredicted RBP14.35□□□□□ -0.11
PRAME-201ENST00000398741 NYAP2Q9P242 653 aa14.35□□□□□ -0.11
PRAME-201ENST00000398741 SRCAPQ6ZRS2 3230 aa14.35□□□□□ -0.11
PRAME-201ENST00000398741 SHTN1A0MZ66 631 aa14.35□□□□□ -0.11
PRAME-201ENST00000398741 KLRG2A4D1S0 409 aaPredicted RBP14.35□□□□□ -0.11
PRAME-201ENST00000398741 ZSCAN5CA6NGD5 496 aaPredicted RBP14.35□□□□□ -0.11
PRAME-201ENST00000398741 FAM196BA6NMK8 535 aa14.35□□□□□ -0.11
PRAME-201ENST00000398741 PDXKO00764 312 aa14.35□□□□□ -0.11
PRAME-201ENST00000398741 KCNK3O14649 394 aa14.35□□□□□ -0.11
PRAME-201ENST00000398741 TBCAO75347 108 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms