RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 ANKK1Q8NFD2 765 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 REPS2Q8NFH8 660 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 NCOA7Q8NI08 942 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 MAP4K1Q92918 833 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 TNPO1Q92973 898 aaKnown RBP4.35□□□□□ -1.71
UBE3A-202ENST00000397954 MTMR8Q96EF0 704 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 SMAD5Q99717 465 aaKnown RBP4.35□□□□□ -1.71
UBE3A-202ENST00000397954 PTPN18Q99952 460 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 SPZ1Q9BXG8 430 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 SLC38A10Q9HBR0 1119 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 ARNT2Q9HBZ2 717 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 ACTR10Q9NZ32 417 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 OGDHLQ9ULD0 1010 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 ZSWIM8A7E2V4 1837 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 A0A087X0B3 334 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 MAFGO15525 162 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 PRPF3O43395 683 aaKnown RBP4.35□□□□□ -1.71
UBE3A-202ENST00000397954 GH2P01242 217 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 ICAM1P05362 532 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 HSPD1P10809 573 aaKnown RBP4.35□□□□□ -1.71
UBE3A-202ENST00000397954 BMP3P12645 472 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 RFC2P35250 354 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 CAMK2GQ13555 558 aaPredicted RBP4.35□□□□□ -1.71
UBE3A-202ENST00000397954 SNX17Q15036 470 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 PPP1R26Q5T8A7 1209 aaPredicted RBP4.35□□□□□ -1.71
UBE3A-202ENST00000397954 UBE2Q1Q7Z7E8 422 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 SGMS1Q86VZ5 419 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 RAET1EQ8TD07 263 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 CCDC12Q8WUD4 166 aaPredicted RBP4.35□□□□□ -1.71
UBE3A-202ENST00000397954 OSBP2Q969R2 916 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 CLMNQ96JQ2 1002 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 ARHGAP39Q9C0H5 1083 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 SLC6A16Q9GZN6 736 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 SPATC1LQ9H0A9 340 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 ARMT1Q9H993 441 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 ZIM2Q9NZV7 527 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 HRH3Q9Y5N1 445 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 ALPK3Q96L96 1907 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 DNAJC25-GNG10A0A024R161 153 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 SNAP23O00161 211 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 DNM1LO00429 736 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 TNPO2O14787 897 aaKnown RBP4.35□□□□□ -1.71
UBE3A-202ENST00000397954 TRPA1O75762 1119 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 PFKMP08237 780 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 FCER1AP12319 257 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 EVCP57679 992 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 NFKB2Q00653 900 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 ANKRD1Q15327 319 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 PPP2R5EQ16537 467 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 SLC9C1Q4G0N8 1177 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 SNAP47Q5SQN1 464 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 C20orf194Q5TEA3 1177 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 MRM1Q6IN84 353 aaKnown RBP4.35□□□□□ -1.71
UBE3A-202ENST00000397954 BNC2Q6ZN30 1099 aaPredicted RBP4.35□□□□□ -1.71
UBE3A-202ENST00000397954 NIPA1Q7RTP0 329 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 THAP3Q8WTV1 239 aaPredicted RBP4.35□□□□□ -1.71
UBE3A-202ENST00000397954 CDHR1Q96JP9 859 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 ESYT1Q9BSJ8 1104 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 PUS7LQ9H0K6 701 aaKnown RBP4.35□□□□□ -1.71
UBE3A-202ENST00000397954 RPAP3Q9H6T3 665 aaPredicted RBP4.35□□□□□ -1.71
UBE3A-202ENST00000397954 ACAD9Q9H845 621 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 SH3GLB2Q9NR46 395 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 SFMBT1Q9UHJ3 866 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 MRPL11Q9Y3B7 192 aaKnown RBP4.35□□□□□ -1.71
UBE3A-202ENST00000397954 CTDP1Q9Y5B0 961 aaPredicted RBP4.35□□□□□ -1.71
UBE3A-202ENST00000397954 KCNMB2Q9Y691 235 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 COMMD10Q9Y6G5 202 aa4.35□□□□□ -1.71
UBE3A-202ENST00000397954 ZMYM2Q9UBW7 1377 aa4.34□□□□□ -1.71
UBE3A-202ENST00000397954 ESYT2A0FGR8 921 aa4.34□□□□□ -1.71
UBE3A-202ENST00000397954 M0R2C6 588 aa4.34□□□□□ -1.71
UBE3A-202ENST00000397954 CNMDO75829 334 aa4.34□□□□□ -1.71
UBE3A-202ENST00000397954 CHMLP26374 656 aa4.34□□□□□ -1.71
UBE3A-202ENST00000397954 IDH3AP50213 366 aa4.34□□□□□ -1.71
UBE3A-202ENST00000397954 DYNLL1P63167 89 aaKnown RBP4.34□□□□□ -1.71
UBE3A-202ENST00000397954 SSRP1Q08945 709 aaKnown RBP4.34□□□□□ -1.71
UBE3A-202ENST00000397954 TCP10Q12799 353 aa4.34□□□□□ -1.71
UBE3A-202ENST00000397954 SPP2Q13103 211 aa4.34□□□□□ -1.71
UBE3A-202ENST00000397954 PWP1Q13610 501 aa4.34□□□□□ -1.71
UBE3A-202ENST00000397954 PEAR1Q5VY43 1037 aaPredicted RBP4.34□□□□□ -1.71
UBE3A-202ENST00000397954 CCSAPQ6IQ19 270 aaPredicted RBP4.34□□□□□ -1.71
UBE3A-202ENST00000397954 PPP4R4Q6NUP7 873 aa4.34□□□□□ -1.71
UBE3A-202ENST00000397954 C6orf15Q6UXA7 325 aaPredicted RBP4.34□□□□□ -1.71
UBE3A-202ENST00000397954 RUFY4Q6ZNE9 571 aa4.34□□□□□ -1.71
UBE3A-202ENST00000397954 SESTD1Q86VW0 696 aa4.34□□□□□ -1.71
UBE3A-202ENST00000397954 CMTR1Q8N1G2 835 aaKnown RBP4.34□□□□□ -1.71
UBE3A-202ENST00000397954 PCSK9Q8NBP7 692 aaKnown RBP4.34□□□□□ -1.71
UBE3A-202ENST00000397954 NKD1Q969G9 470 aa4.34□□□□□ -1.71
UBE3A-202ENST00000397954 ZKSCAN4Q969J2 545 aaPredicted RBP4.34□□□□□ -1.71
UBE3A-202ENST00000397954 TOX2Q96NM4 488 aa4.34□□□□□ -1.71
UBE3A-202ENST00000397954 ANTXR1Q9H6X2 564 aa4.34□□□□□ -1.71
UBE3A-202ENST00000397954 EPB41L4AQ9HCS5 686 aaPredicted RBP4.34□□□□□ -1.71
UBE3A-202ENST00000397954 GEMIN8Q9NWZ8 242 aaKnown RBP4.34□□□□□ -1.71
UBE3A-202ENST00000397954 GJD2Q9UKL4 321 aa4.34□□□□□ -1.71
UBE3A-202ENST00000397954 MAP4K5Q9Y4K4 846 aa4.34□□□□□ -1.71
UBE3A-202ENST00000397954 ELP1O95163 1332 aa4.34□□□□□ -1.71
UBE3A-202ENST00000397954 WTIPA6NIX2 430 aaPredicted RBP4.34□□□□□ -1.72
UBE3A-202ENST00000397954 VWA5AO00534 786 aa4.34□□□□□ -1.72
UBE3A-202ENST00000397954 NR3C2P08235 984 aa4.34□□□□□ -1.72
UBE3A-202ENST00000397954 TGFB3P10600 412 aa4.34□□□□□ -1.72
UBE3A-202ENST00000397954 TFE3P19532 575 aaPredicted RBP4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms