RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 DNAJC7Q99615 494 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 CCSER1Q9C0I3 900 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 HAUS4Q9H6D7 363 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 BLOC1S4Q9NUP1 217 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 SALL4Q9UJQ4 1053 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 USP21Q9UK80 565 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 KIAA1024Q9UPX6 916 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 TRPC6Q9Y210 931 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 BCS1LQ9Y276 419 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 PPP1R11O60927 126 aaPredicted RBP5.5□□□□□ -1.53
SSR1-202ENST00000397511 COQ9O75208 318 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 SERPINB2P05120 415 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 KRT18P05783 430 aaKnown RBP5.5□□□□□ -1.53
SSR1-202ENST00000397511 SETSIPP0DME0 302 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 ADCY7P51828 1080 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 RHBDL3P58872 404 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 KRT83P78385 493 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 CYP4A11Q02928 519 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 SNX1Q13596 522 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 KRT79Q5XKE5 535 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 CNNM4Q6P4Q7 775 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 C16orf86Q6ZW13 317 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 KRT25Q7Z3Z0 450 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 NLRP14Q86W24 1093 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 KIAA0825Q8IV33 1275 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 SPICE1Q8N0Z3 855 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 C3orf20Q8ND61 904 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 PNMA5Q96PV4 448 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 OSBPL9Q96SU4 736 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 PYM1Q9BRP8 204 aaKnown RBP5.5□□□□□ -1.53
SSR1-202ENST00000397511 IKZF4Q9H2S9 585 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 THAP9Q9H5L6 903 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 DBNDD1Q9H9R9 158 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 SH3GLB2Q9NR46 395 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 HAUS2Q9NVX0 235 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 POTEB3A0JP26 581 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 BICDL2A1A5D9 508 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 ZSCAN5CA6NGD5 496 aaPredicted RBP5.5□□□□□ -1.53
SSR1-202ENST00000397511 SRRM3A6NNA2 597 aaPredicted RBP5.5□□□□□ -1.53
SSR1-202ENST00000397511 SFI1A8K8P3 1242 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 POTECB2RU33 542 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 AHCYL1O43865 530 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 PPP1R37O75864 691 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 ATP1A2P50993 1020 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 KIF11P52732 1056 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 AMPD3Q01432 767 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 TRIM14Q14142 442 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 PTGISQ16647 500 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 MSL1Q68DK7 614 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 SLC30A9Q6PML9 568 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 POTEBQ6S5H4 581 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 KDM7AQ6ZMT4 941 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 BZW1Q7L1Q6 419 aaKnown RBP5.5□□□□□ -1.53
SSR1-202ENST00000397511 TRAPPC11Q7Z392 1133 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 MFN1Q8IWA4 741 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 TRIM58Q8NG06 486 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 NEDD1Q8NHV4 660 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 TBC1D16Q8TBP0 767 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 AENQ8WTP8 325 aaKnown RBP5.5□□□□□ -1.53
SSR1-202ENST00000397511 NSMCE1Q8WV22 266 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 DHTKD1Q96HY7 919 aaPredicted RBP5.5□□□□□ -1.53
SSR1-202ENST00000397511 CCT8L2Q96SF2 557 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 LRRC1Q9BTT6 524 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 ZNF287Q9HBT7 754 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 USP40Q9NVE5 1235 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 CHCHD3Q9NX63 227 aaKnown RBP5.5□□□□□ -1.53
SSR1-202ENST00000397511 DDX25Q9UHL0 483 aaKnown RBP5.5□□□□□ -1.53
SSR1-202ENST00000397511 DMGDHQ9UI17 866 aaKnown RBP5.5□□□□□ -1.53
SSR1-202ENST00000397511 PCDHA12Q9UN75 941 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 LEMD3Q9Y2U8 911 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 DAGLAQ9Y4D2 1042 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 SCN7AQ01118 1682 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 CCDC88AQ3V6T2 1871 aa5.5□□□□□ -1.53
SSR1-202ENST00000397511 RGL2O15211 777 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 EDIL3O43854 480 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 FTCDO95954 541 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 FAM107AO95990 144 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 FESP07332 822 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 SLC1A4P43007 532 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 POLR2FP61218 127 aaKnown RBP5.49□□□□□ -1.53
SSR1-202ENST00000397511 UBXN2AP68543 259 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 ZBED6P86452 979 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 TMEM266Q2M3C6 531 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 TBC1D25Q3MII6 688 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 VWA3BQ502W6 1294 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 HERC4Q5GLZ8 1057 aaPredicted RBP5.49□□□□□ -1.53
SSR1-202ENST00000397511 TCERG1LQ5VWI1 586 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 MIS18BP1Q6P0N0 1132 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 TRIM74Q86UV6 250 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 TRIM73Q86UV7 250 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 MYCBPAPQ8TBZ2 947 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 NOC3LQ8WTT2 800 aaKnown RBP5.49□□□□□ -1.53
SSR1-202ENST00000397511 RUBCNQ92622 972 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 TTYH3Q9C0H2 523 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 SUDS3Q9H7L9 328 aaPredicted RBP5.49□□□□□ -1.53
SSR1-202ENST00000397511 JMJD4Q9H9V9 463 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.49□□□□□ -1.532e-6■■□□□ 12.4
SSR1-202ENST00000397511 MTMR4Q9NYA4 1195 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 CORO1CQ9ULV4 474 aaPredicted RBP5.49□□□□□ -1.53
SSR1-202ENST00000397511 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms