RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 KATNBL1Q9H079 304 aa15.18■□□□□ 0.02
MCF2L-209ENST00000397036 DNAJC25Q9H1X3 360 aa15.18■□□□□ 0.02
MCF2L-209ENST00000397036 ABHD16BQ9H3Z7 469 aa15.18■□□□□ 0.02
MCF2L-209ENST00000397036 PKD2L1Q9P0L9 805 aa15.18■□□□□ 0.02
MCF2L-209ENST00000397036 IGKV6D-21A0A0A0MT36 114 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 DDX39AO00148 427 aaKnown RBP15.17■□□□□ 0.02
MCF2L-209ENST00000397036 BIN1O00499 593 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 AOC2O75106 756 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 FARP2O94887 1054 aaPredicted RBP15.17■□□□□ 0.02
MCF2L-209ENST00000397036 SNAI1O95863 264 aaPredicted RBP15.17■□□□□ 0.02
MCF2L-209ENST00000397036 CYP11B2P19099 503 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 ERCC5P28715 1186 aaPredicted RBP15.17■□□□□ 0.02
MCF2L-209ENST00000397036 PPP1R2P41236 205 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 ACTR2P61160 394 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 PSMC6P62333 389 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 PSMD2Q13200 908 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 IQCB1Q15051 598 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 DPCR1Q3MIW9 517 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 CELF3Q5SZQ8 465 aaKnown RBP15.17■□□□□ 0.02
MCF2L-209ENST00000397036 ZNF658Q5TYW1 1059 aaPredicted RBP15.17■□□□□ 0.02
MCF2L-209ENST00000397036 OLFML2BQ68BL8 750 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 TAPT1Q6NXT6 567 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 MIS18BP1Q6P0N0 1132 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 DDX12PQ92771 950 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 ATP6V0A1Q93050 837 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 BLZF1Q9H2G9 400 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 CBX8Q9HC52 389 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 ANKEF1Q9NU02 776 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.17■□□□□ 0.02
MCF2L-209ENST00000397036 FRMD3A2A2Y4 597 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 XRCC5P13010 732 aaKnown RBP15.17■□□□□ 0.02
MCF2L-209ENST00000397036 CASP1P29466 404 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 RGS2P41220 211 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 EHHADHQ08426 723 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 KMT5BQ4FZB7 885 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 ARSHQ5FYA8 562 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 C11orf57Q6ZUT1 292 aaPredicted RBP15.17■□□□□ 0.02
MCF2L-209ENST00000397036 CYFIP1Q7L576 1253 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 NPLOC4Q8TAT6 608 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 SEPT1Q8WYJ6 367 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 WRAP73Q9P2S5 460 aaPredicted RBP15.17■□□□□ 0.02
MCF2L-209ENST00000397036 SAMM50Q9Y512 469 aa15.17■□□□□ 0.02
MCF2L-209ENST00000397036 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.16■□□□□ 0.02
MCF2L-209ENST00000397036 IKBKBO14920 756 aa15.16■□□□□ 0.02
MCF2L-209ENST00000397036 SUPT20HL2P0C7V6 817 aa15.16■□□□□ 0.02
MCF2L-209ENST00000397036 FCGRTP55899 365 aa15.16■□□□□ 0.02
MCF2L-209ENST00000397036 ASIC1P78348 528 aa15.16■□□□□ 0.02
MCF2L-209ENST00000397036 IQSEC1Q6DN90 963 aa15.16■□□□□ 0.02
MCF2L-209ENST00000397036 EMID1Q96A84 441 aaPredicted RBP15.16■□□□□ 0.02
MCF2L-209ENST00000397036 BHMT2Q9H2M3 363 aa15.16■□□□□ 0.02
MCF2L-209ENST00000397036 BCAS3Q9H6U6 928 aa15.16■□□□□ 0.02
MCF2L-209ENST00000397036 NRBP1Q9UHY1 535 aa15.16■□□□□ 0.02
MCF2L-209ENST00000397036 MAFBQ9Y5Q3 323 aaPredicted RBP15.16■□□□□ 0.02
MCF2L-209ENST00000397036 GSTTP1A0A1W2PQM5 241 aa15.15■□□□□ 0.02
MCF2L-209ENST00000397036 SMTNL1A8MU46 457 aa15.15■□□□□ 0.02
MCF2L-209ENST00000397036 TNPO2O14787 897 aaKnown RBP15.15■□□□□ 0.02
MCF2L-209ENST00000397036 NKRFO15226 690 aaKnown RBP eCLIP15.15■□□□□ 0.02
MCF2L-209ENST00000397036 ARIH2O95376 493 aa15.15■□□□□ 0.02
MCF2L-209ENST00000397036 GGPS1O95749 300 aa15.15■□□□□ 0.02
MCF2L-209ENST00000397036 TXNP10599 105 aaKnown RBP15.15■□□□□ 0.02
MCF2L-209ENST00000397036 GUCY2CP25092 1073 aa15.15■□□□□ 0.02
MCF2L-209ENST00000397036 LACTBP83111 547 aaPredicted RBP15.15■□□□□ 0.02
MCF2L-209ENST00000397036 GRM1Q13255 1194 aa15.15■□□□□ 0.02
MCF2L-209ENST00000397036 LAMC2Q13753 1193 aa15.15■□□□□ 0.02
MCF2L-209ENST00000397036 RINT1Q6NUQ1 792 aa15.15■□□□□ 0.02
MCF2L-209ENST00000397036 C1orf186Q6ZWK4 172 aa15.15■□□□□ 0.02
MCF2L-209ENST00000397036 OTUD6AQ7L8S5 288 aa15.15■□□□□ 0.02
MCF2L-209ENST00000397036 EEPD1Q7L9B9 569 aa15.15■□□□□ 0.02
MCF2L-209ENST00000397036 GPBP1Q86WP2 473 aa15.15■□□□□ 0.02
MCF2L-209ENST00000397036 FBXO16Q8IX29 292 aaPredicted RBP15.15■□□□□ 0.02
MCF2L-209ENST00000397036 CCDC65Q8IXS2 484 aa15.15■□□□□ 0.02
MCF2L-209ENST00000397036 BANK1Q8NDB2 785 aa15.15■□□□□ 0.02
MCF2L-209ENST00000397036 AFAP1L1Q8TED9 768 aa15.15■□□□□ 0.02
MCF2L-209ENST00000397036 TIPINQ9BVW5 301 aa15.15■□□□□ 0.02
MCF2L-209ENST00000397036 MLXIPQ9HAP2 919 aa15.15■□□□□ 0.02
MCF2L-209ENST00000397036 KIAA1217Q5T5P2 1943 aa15.15■□□□□ 0.02
MCF2L-209ENST00000397036 PPP1R3GB7ZBB8 358 aa15.14■□□□□ 0.01
MCF2L-209ENST00000397036 STBD1O95210 358 aa15.14■□□□□ 0.01
MCF2L-209ENST00000397036 VEGFBP49765 207 aa15.14■□□□□ 0.01
MCF2L-209ENST00000397036 RARRES1P49788 294 aa15.14■□□□□ 0.01
MCF2L-209ENST00000397036 ACVR2BQ13705 512 aa15.14■□□□□ 0.01
MCF2L-209ENST00000397036 GIT2Q14161 759 aa15.14■□□□□ 0.01
MCF2L-209ENST00000397036 DHX8Q14562 1220 aaKnown RBP15.14■□□□□ 0.01
MCF2L-209ENST00000397036 LY6KQ17RY6 165 aa15.14■□□□□ 0.01
MCF2L-209ENST00000397036 SWSAP1Q6NVH7 229 aa15.14■□□□□ 0.01
MCF2L-209ENST00000397036 RNF214Q8ND24 703 aa15.14■□□□□ 0.01
MCF2L-209ENST00000397036 ENOX1Q8TC92 643 aaKnown RBP15.14■□□□□ 0.01
MCF2L-209ENST00000397036 PIGOQ8TEQ8 1089 aa15.14■□□□□ 0.01
MCF2L-209ENST00000397036 APBA2Q99767 749 aa15.14■□□□□ 0.01
MCF2L-209ENST00000397036 EXOC1Q9NV70 894 aa15.14■□□□□ 0.01
MCF2L-209ENST00000397036 PPME1Q9Y570 386 aa15.14■□□□□ 0.01
MCF2L-209ENST00000397036 PLXNB2O15031 1838 aa15.14■□□□□ 0.01
MCF2L-209ENST00000397036 IGSF9BQ9UPX0 1349 aa15.13■□□□□ 0.01
MCF2L-209ENST00000397036 A0A087WWV3 80 aa15.13■□□□□ 0.01
MCF2L-209ENST00000397036 LGR5O75473 907 aa15.13■□□□□ 0.01
MCF2L-209ENST00000397036 SSBP05455 408 aaKnown RBP eCLIP15.13■□□□□ 0.01
MCF2L-209ENST00000397036 YWHABP31946 246 aaKnown RBP15.13■□□□□ 0.01
MCF2L-209ENST00000397036 XKR3Q5GH77 459 aa15.13■□□□□ 0.01
MCF2L-209ENST00000397036 ISM2Q6H9L7 571 aa15.13■□□□□ 0.01
MCF2L-209ENST00000397036 FOXR2Q6PJQ5 311 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms