RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 LRRC45Q96CN5 670 aa26.25■■□□□ 1.79
CSNK1E-203ENST00000396832 NOVA2Q9UNW9 492 aaKnown RBP26.25■■□□□ 1.79
CSNK1E-203ENST00000396832 MGRN1O60291 552 aa26.25■■□□□ 1.79
CSNK1E-203ENST00000396832 MARCH6O60337 910 aa26.25■■□□□ 1.79
CSNK1E-203ENST00000396832 NOL4O94818 638 aa26.25■■□□□ 1.79
CSNK1E-203ENST00000396832 SLC9C1Q4G0N8 1177 aa26.25■■□□□ 1.79
CSNK1E-203ENST00000396832 CPLX4Q7Z7G2 160 aa26.25■■□□□ 1.79
CSNK1E-203ENST00000396832 TATDN2Q93075 761 aa26.25■■□□□ 1.79
CSNK1E-203ENST00000396832 GPCPD1Q9NPB8 672 aa26.25■■□□□ 1.79
CSNK1E-203ENST00000396832 CCDC88AQ3V6T2 1871 aa26.25■■□□□ 1.79
CSNK1E-203ENST00000396832 ACTN1P12814 892 aa26.24■■□□□ 1.79
CSNK1E-203ENST00000396832 CDK8P49336 464 aa26.24■■□□□ 1.79
CSNK1E-203ENST00000396832 CCT6BQ92526 530 aa26.24■■□□□ 1.79
CSNK1E-203ENST00000396832 PPP1R12BO60237 982 aaPredicted RBP26.24■■□□□ 1.79
CSNK1E-203ENST00000396832 GUF1Q8N442 669 aaKnown RBP26.24■■□□□ 1.79
CSNK1E-203ENST00000396832 UBLCP1Q8WVY7 318 aaPredicted RBP26.24■■□□□ 1.79
CSNK1E-203ENST00000396832 RAD54LQ92698 747 aa26.24■■□□□ 1.79
CSNK1E-203ENST00000396832 GBP2P32456 591 aaPredicted RBP26.24■■□□□ 1.79
CSNK1E-203ENST00000396832 COASYQ13057 564 aa26.24■■□□□ 1.79
CSNK1E-203ENST00000396832 TSG101Q99816 390 aa26.24■■□□□ 1.79
CSNK1E-203ENST00000396832 AP1M1Q9BXS5 423 aa26.24■■□□□ 1.79
CSNK1E-203ENST00000396832 TMEM59LQ9UK28 342 aa26.24■■□□□ 1.79
CSNK1E-203ENST00000396832 CUL1Q13616 776 aa26.23■■□□□ 1.79
CSNK1E-203ENST00000396832 NFIXQ14938 502 aa26.23■■□□□ 1.79
CSNK1E-203ENST00000396832 TMEM266Q2M3C6 531 aa26.23■■□□□ 1.79
CSNK1E-203ENST00000396832 LRCH2Q5VUJ6 765 aa26.23■■□□□ 1.79
CSNK1E-203ENST00000396832 ARMC9Q7Z3E5 817 aa26.23■■□□□ 1.79
CSNK1E-203ENST00000396832 PCDHGC5Q9Y5F6 944 aa26.23■■□□□ 1.79
CSNK1E-203ENST00000396832 RREB1Q92766 1687 aa26.23■■□□□ 1.79
CSNK1E-203ENST00000396832 COL22A1Q8NFW1 1626 aaPredicted RBP26.23■■□□□ 1.79
CSNK1E-203ENST00000396832 KCNK3O14649 394 aa26.23■■□□□ 1.79
CSNK1E-203ENST00000396832 RAD21O60216 631 aa26.23■■□□□ 1.79
CSNK1E-203ENST00000396832 KRT79Q5XKE5 535 aa26.23■■□□□ 1.79
CSNK1E-203ENST00000396832 MYOCDQ8IZQ8 938 aa26.23■■□□□ 1.79
CSNK1E-203ENST00000396832 EIF1ADQ8N9N8 165 aaKnown RBP26.23■■□□□ 1.79
CSNK1E-203ENST00000396832 COL4A3BPQ9Y5P4 624 aa26.23■■□□□ 1.79
CSNK1E-203ENST00000396832 LAMB2P55268 1798 aa26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 DCDC2CA8MYV0 355 aa26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 SF3A3Q12874 501 aaKnown RBP eCLIP26.22■■□□□ 1.799e-8■■■■■ 35.8
CSNK1E-203ENST00000396832 MSL1Q68DK7 614 aa26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 PTF1AQ7RTS3 328 aa26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 TBC1D31Q96DN5 1066 aa26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 NEUROG2Q9H2A3 272 aa26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 KDM4CQ9H3R0 1056 aa26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 LUC7LQ9NQ29 371 aaKnown RBP26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 FBXL5Q9UKA1 691 aa26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 E9PMD0 336 aa26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 EDIL3O43854 480 aa26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 DNAJC8O75937 253 aaPredicted RBP26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 PAEPP09466 180 aa26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 EPS15P42566 896 aa26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 BTDP43251 543 aa26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 MAGOHP61326 146 aaKnown RBP26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 ELF3P78545 371 aaPredicted RBP26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 NAA25Q14CX7 972 aa26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 TAF4BQ92750 862 aa26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 MAGOHBQ96A72 148 aaKnown RBP26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 MTMR9Q96QG7 549 aa26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 SPZ1Q9BXG8 430 aa26.22■■□□□ 1.79
CSNK1E-203ENST00000396832 PPP1R12AO14974 1030 aaPredicted RBP26.21■■□□□ 1.79
CSNK1E-203ENST00000396832 KLHL30Q0D2K2 578 aa26.21■■□□□ 1.79
CSNK1E-203ENST00000396832 AGBL2Q5U5Z8 902 aa26.21■■□□□ 1.79
CSNK1E-203ENST00000396832 FMNL3Q8IVF7 1028 aa26.21■■□□□ 1.79
CSNK1E-203ENST00000396832 P3H4Q92791 437 aa26.21■■□□□ 1.79
CSNK1E-203ENST00000396832 MYH4Q9Y623 1939 aa26.21■■□□□ 1.79
CSNK1E-203ENST00000396832 RTN2O75298 545 aa26.21■■□□□ 1.79
CSNK1E-203ENST00000396832 SERPING1P05155 500 aa26.21■■□□□ 1.79
CSNK1E-203ENST00000396832 FLT3P36888 993 aa26.21■■□□□ 1.79
CSNK1E-203ENST00000396832 LRRC63Q05C16 580 aa26.21■■□□□ 1.79
CSNK1E-203ENST00000396832 COBLL1Q53SF7 1204 aa26.21■■□□□ 1.79
CSNK1E-203ENST00000396832 TAX1BP1Q86VP1 789 aa26.21■■□□□ 1.79
CSNK1E-203ENST00000396832 TRIM6Q9C030 488 aaPredicted RBP26.21■■□□□ 1.79
CSNK1E-203ENST00000396832 SLC24A3Q9HC58 644 aa26.21■■□□□ 1.79
CSNK1E-203ENST00000396832 BAIAP2L1Q9UHR4 511 aa26.21■■□□□ 1.79
CSNK1E-203ENST00000396832 ATP6V1G2O95670 118 aa26.2■■□□□ 1.79
CSNK1E-203ENST00000396832 NBPF9Q3BBW0 867 aa26.2■■□□□ 1.79
CSNK1E-203ENST00000396832 ACCSLQ4AC99 568 aa26.2■■□□□ 1.79
CSNK1E-203ENST00000396832 ANKS1AQ92625 1134 aa26.2■■□□□ 1.79
CSNK1E-203ENST00000396832 EDEM3Q9BZQ6 932 aa26.2■■□□□ 1.79
CSNK1E-203ENST00000396832 NOD2Q9HC29 1040 aa26.2■■□□□ 1.79
CSNK1E-203ENST00000396832 PANK4Q9NVE7 773 aa26.2■■□□□ 1.79
CSNK1E-203ENST00000396832 DRD4P21917 467 aa26.2■■□□□ 1.78
CSNK1E-203ENST00000396832 HIBCHQ6NVY1 386 aaPredicted RBP26.2■■□□□ 1.78
CSNK1E-203ENST00000396832 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.2■■□□□ 1.78
CSNK1E-203ENST00000396832 SNED1Q8TER0 1413 aa26.2■■□□□ 1.78
CSNK1E-203ENST00000396832 FGFR1OPO95684 399 aaKnown RBP26.19■■□□□ 1.78
CSNK1E-203ENST00000396832 BAG3O95817 575 aa26.19■■□□□ 1.78
CSNK1E-203ENST00000396832 GHRP10912 638 aa26.19■■□□□ 1.78
CSNK1E-203ENST00000396832 PICALMQ13492 652 aa26.19■■□□□ 1.78
CSNK1E-203ENST00000396832 TBC1D22AQ8WUA7 517 aa26.19■■□□□ 1.78
CSNK1E-203ENST00000396832 SETDB2Q96T68 719 aa26.19■■□□□ 1.78
CSNK1E-203ENST00000396832 PPIP5K2O43314 1243 aa26.19■■□□□ 1.78
CSNK1E-203ENST00000396832 PPP1R7Q15435 360 aa26.19■■□□□ 1.78
CSNK1E-203ENST00000396832 FAM26FQ5R3K3 315 aa26.19■■□□□ 1.78
CSNK1E-203ENST00000396832 SPTY2D1Q68D10 685 aaPredicted RBP26.19■■□□□ 1.78
CSNK1E-203ENST00000396832 CEP72Q9P209 647 aa26.19■■□□□ 1.78
CSNK1E-203ENST00000396832 ATP6V0A2Q9Y487 856 aa26.19■■□□□ 1.78
CSNK1E-203ENST00000396832 ROBO1Q9Y6N7 1651 aa26.18■■□□□ 1.78
CSNK1E-203ENST00000396832 SLURP2P0DP57 97 aa26.18■■□□□ 1.78
CSNK1E-203ENST00000396832 SLC16A2P36021 539 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms