RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 C7orf25Q9BPX7 421 aa15.28■□□□□ 0.04
VAPB-202ENST00000395802 RGL1Q9NZL6 768 aa15.28■□□□□ 0.04
VAPB-202ENST00000395802 PCDHA5Q9Y5H7 936 aa15.28■□□□□ 0.04
VAPB-202ENST00000395802 EYA4O95677 639 aa15.27■□□□□ 0.04
VAPB-202ENST00000395802 SNAI1O95863 264 aaPredicted RBP15.27■□□□□ 0.04
VAPB-202ENST00000395802 PLA2G4BP0C869 781 aa15.27■□□□□ 0.04
VAPB-202ENST00000395802 TYRO3Q06418 890 aa15.27■□□□□ 0.04
VAPB-202ENST00000395802 DPYDQ12882 1025 aa15.27■□□□□ 0.04
VAPB-202ENST00000395802 CTTNQ14247 550 aaKnown RBP15.27■□□□□ 0.04
VAPB-202ENST00000395802 CELF3Q5SZQ8 465 aaKnown RBP15.27■□□□□ 0.04
VAPB-202ENST00000395802 CCDC62Q6P9F0 684 aa15.27■□□□□ 0.04
VAPB-202ENST00000395802 OTUD6AQ7L8S5 288 aa15.27■□□□□ 0.04
VAPB-202ENST00000395802 SEPT1Q8WYJ6 367 aa15.27■□□□□ 0.04
VAPB-202ENST00000395802 BLOC1S4Q9NUP1 217 aa15.27■□□□□ 0.04
VAPB-202ENST00000395802 DACH1Q9UI36 760 aa15.27■□□□□ 0.04
VAPB-202ENST00000395802 THSD7BQ9C0I4 1608 aa15.27■□□□□ 0.04
VAPB-202ENST00000395802 GPR25O00155 361 aa15.27■□□□□ 0.03
VAPB-202ENST00000395802 BACH1O14867 736 aa15.27■□□□□ 0.03
VAPB-202ENST00000395802 ATG7O95352 703 aa15.27■□□□□ 0.03
VAPB-202ENST00000395802 CCNE2O96020 404 aa15.27■□□□□ 0.03
VAPB-202ENST00000395802 GH1P01241 217 aa15.27■□□□□ 0.03
VAPB-202ENST00000395802 ECM1Q16610 540 aa15.27■□□□□ 0.03
VAPB-202ENST00000395802 LY6KQ17RY6 165 aa15.27■□□□□ 0.03
VAPB-202ENST00000395802 MFSD14CQ5VZR4 134 aa15.27■□□□□ 0.03
VAPB-202ENST00000395802 FAM160B1Q5W0V3 765 aa15.27■□□□□ 0.03
VAPB-202ENST00000395802 TAPT1Q6NXT6 567 aa15.27■□□□□ 0.03
VAPB-202ENST00000395802 CNNM4Q6P4Q7 775 aa15.27■□□□□ 0.03
VAPB-202ENST00000395802 ABHD15Q6UXT9 468 aa15.27■□□□□ 0.03
VAPB-202ENST00000395802 SYT2Q8N9I0 419 aaPredicted RBP15.27■□□□□ 0.03
VAPB-202ENST00000395802 EMID1Q96A84 441 aaPredicted RBP15.27■□□□□ 0.03
VAPB-202ENST00000395802 TRIM47Q96LD4 638 aa15.27■□□□□ 0.03
VAPB-202ENST00000395802 TRIM9Q9C026 710 aa15.27■□□□□ 0.03
VAPB-202ENST00000395802 AZI2Q9H6S1 392 aa15.27■□□□□ 0.03
VAPB-202ENST00000395802 ZHX1Q9UKY1 873 aaPredicted RBP15.27■□□□□ 0.03
VAPB-202ENST00000395802 LRRC37A2A6NM11 1700 aa15.26■□□□□ 0.03
VAPB-202ENST00000395802 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.26■□□□□ 0.03
VAPB-202ENST00000395802 E9PMD0 336 aa15.26■□□□□ 0.03
VAPB-202ENST00000395802 SSBP05455 408 aaKnown RBP eCLIP15.26■□□□□ 0.03
VAPB-202ENST00000395802 SUPT20HL2P0C7V6 817 aa15.26■□□□□ 0.03
VAPB-202ENST00000395802 SARSP49591 514 aaKnown RBP15.26■□□□□ 0.03
VAPB-202ENST00000395802 HTRA3P83110 453 aa15.26■□□□□ 0.03
VAPB-202ENST00000395802 MCM6Q14566 821 aa15.26■□□□□ 0.03
VAPB-202ENST00000395802 BANK1Q8NDB2 785 aa15.26■□□□□ 0.03
VAPB-202ENST00000395802 DBR1Q9UK59 544 aaKnown RBP15.26■□□□□ 0.03
VAPB-202ENST00000395802 PVALEFA0A1B0GWK0 134 aa15.25■□□□□ 0.03
VAPB-202ENST00000395802 FKTNO75072 461 aa15.25■□□□□ 0.03
VAPB-202ENST00000395802 ECM2O94769 699 aaPredicted RBP15.25■□□□□ 0.03
VAPB-202ENST00000395802 KRT18P05783 430 aaKnown RBP15.25■□□□□ 0.03
VAPB-202ENST00000395802 FLT3LGP49771 235 aa15.25■□□□□ 0.03
VAPB-202ENST00000395802 SLC26A2P50443 739 aa15.25■□□□□ 0.03
VAPB-202ENST00000395802 PRMT2P55345 433 aa15.25■□□□□ 0.03
VAPB-202ENST00000395802 C1QTNF8P60827 252 aa15.25■□□□□ 0.03
VAPB-202ENST00000395802 SP4Q02446 784 aa15.25■□□□□ 0.03
VAPB-202ENST00000395802 DHX8Q14562 1220 aaKnown RBP15.25■□□□□ 0.03
VAPB-202ENST00000395802 KCNB1Q14721 858 aa15.25■□□□□ 0.03
VAPB-202ENST00000395802 DUSP28Q4G0W2 176 aa15.25■□□□□ 0.03
VAPB-202ENST00000395802 CT47A1Q5JQC4 288 aaPredicted RBP15.25■□□□□ 0.03
VAPB-202ENST00000395802 GRAMD1CQ8IYS0 662 aa15.25■□□□□ 0.03
VAPB-202ENST00000395802 SPATA33Q96N06 139 aa15.25■□□□□ 0.03
VAPB-202ENST00000395802 KATNBL1Q9H079 304 aa15.25■□□□□ 0.03
VAPB-202ENST00000395802 BHMT2Q9H2M3 363 aa15.25■□□□□ 0.03
VAPB-202ENST00000395802 ZNF302Q9NR11 478 aa15.25■□□□□ 0.03
VAPB-202ENST00000395802 GABBR1Q9UBS5 961 aa15.25■□□□□ 0.03
VAPB-202ENST00000395802 MGAMO43451 1857 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 FOXN1O15353 648 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 RPN1P04843 607 aaKnown RBP15.24■□□□□ 0.03
VAPB-202ENST00000395802 YWHABP31946 246 aaKnown RBP15.24■□□□□ 0.03
VAPB-202ENST00000395802 NLRP12P59046 1061 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 ASIC1P78348 528 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 CUL4BQ13620 913 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 BRDTQ58F21 947 aaPredicted RBP15.24■□□□□ 0.03
VAPB-202ENST00000395802 SWSAP1Q6NVH7 229 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 STAMQ92783 540 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 MTRQ99707 1265 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 ANKEF1Q9NU02 776 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 LOXHD1Q8IVV2 1947 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 ARHGEF35A5YM69 484 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 ARIH2O95376 493 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 CTGFP29279 349 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 PPP1R2P41236 205 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 SLC12A3P55017 1021 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 TNFAIP2Q03169 654 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 CCDC144BQ3MJ40 725 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 KCNK18Q7Z418 384 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 GPBP1Q86WP2 473 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 MLKLQ8NB16 471 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 RNF214Q8ND24 703 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 PPTC7Q8NI37 304 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 AFAP1L1Q8TED9 768 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 DDX12PQ92771 950 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 ERCC4Q92889 916 aaPredicted RBP15.24■□□□□ 0.03
VAPB-202ENST00000395802 FAM167AQ96KS9 214 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 TIPINQ9BVW5 301 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 BLZF1Q9H2G9 400 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 PDGFCQ9NRA1 345 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 SRRDQ9UH36 339 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 FAM184BQ9ULE4 1060 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 Q9Y3F1 56 aa15.24■□□□□ 0.03
VAPB-202ENST00000395802 MAFBQ9Y5Q3 323 aaPredicted RBP15.24■□□□□ 0.03
VAPB-202ENST00000395802 DOCK3Q8IZD9 2030 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms