RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CCDC150Q8NCX0 1101 aa16.86■□□□□ 0.29
SCAF11-204ENST00000395454 SERPINC1P01008 464 aa16.86■□□□□ 0.29
SCAF11-204ENST00000395454 EDNRBP24530 442 aa16.86■□□□□ 0.29
SCAF11-204ENST00000395454 SPIRE1Q08AE8 756 aa16.86■□□□□ 0.29
SCAF11-204ENST00000395454 PAK1Q13153 545 aa16.86■□□□□ 0.29
SCAF11-204ENST00000395454 NOLC1Q14978 699 aaKnown RBP eCLIP16.86■□□□□ 0.29
SCAF11-204ENST00000395454 KMT5BQ4FZB7 885 aa16.86■□□□□ 0.29
SCAF11-204ENST00000395454 KRT79Q5XKE5 535 aa16.86■□□□□ 0.29
SCAF11-204ENST00000395454 MAMDC4Q6UXC1 1216 aa16.86■□□□□ 0.29
SCAF11-204ENST00000395454 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.86■□□□□ 0.29
SCAF11-204ENST00000395454 CYP2W1Q8TAV3 490 aa16.86■□□□□ 0.29
SCAF11-204ENST00000395454 NAP1L5Q96NT1 182 aaPredicted RBP16.86■□□□□ 0.29
SCAF11-204ENST00000395454 SAMSN1Q9NSI8 373 aaKnown RBP16.86■□□□□ 0.29
SCAF11-204ENST00000395454 PCDHA12Q9UN75 941 aa16.86■□□□□ 0.29
SCAF11-204ENST00000395454 KDM3AQ9Y4C1 1321 aa16.85■□□□□ 0.29
SCAF11-204ENST00000395454 LOC102724159A0A0B4J2E5 919 aa16.85■□□□□ 0.29
SCAF11-204ENST00000395454 A0A1B0GTH6 734 aa16.85■□□□□ 0.29
SCAF11-204ENST00000395454 FAM86B1E9PN63 330 aa16.85■□□□□ 0.29
SCAF11-204ENST00000395454 FAM86B2P0C5J1 330 aa16.85■□□□□ 0.29
SCAF11-204ENST00000395454 CCZ1BP86790 482 aa16.85■□□□□ 0.29
SCAF11-204ENST00000395454 CCZ1P86791 482 aaPredicted RBP16.85■□□□□ 0.29
SCAF11-204ENST00000395454 PWP2Q15269 919 aaKnown RBP16.85■□□□□ 0.29
SCAF11-204ENST00000395454 TRIB2Q92519 343 aa16.85■□□□□ 0.29
SCAF11-204ENST00000395454 FAM20AQ96MK3 541 aa16.85■□□□□ 0.29
SCAF11-204ENST00000395454 KCND1Q9NSA2 647 aa16.85■□□□□ 0.29
SCAF11-204ENST00000395454 SYNGAP1Q96PV0 1343 aa16.85■□□□□ 0.29
SCAF11-204ENST00000395454 PVALEFA0A1B0GWK0 134 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 EIF3JO75822 258 aaKnown RBP16.84■□□□□ 0.29
SCAF11-204ENST00000395454 CYP2C19P33261 490 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 PPP1R2P41236 205 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 PRCPP42785 496 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 IRF5Q13568 498 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 CEP55Q53EZ4 464 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 PRR16Q569H4 304 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 OLFML2BQ68BL8 750 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 XRRA1Q6P2D8 792 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 FBXO16Q8IX29 292 aaPredicted RBP16.84■□□□□ 0.29
SCAF11-204ENST00000395454 MSL3Q8N5Y2 521 aaKnown RBP16.84■□□□□ 0.29
SCAF11-204ENST00000395454 SNX29Q8TEQ0 813 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 LARP4BQ92615 738 aaKnown RBP16.84■□□□□ 0.29
SCAF11-204ENST00000395454 RAD54LQ92698 747 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.84■□□□□ 0.29
SCAF11-204ENST00000395454 LRRC10BA6NIK2 292 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 ELNP15502 786 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 ITGB5P18084 799 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 KCNJ6P48051 423 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 PRMT2P55345 433 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 NR1I3Q14994 352 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 TMC6Q7Z403 805 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 FILIP1Q7Z7B0 1213 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 MORC4Q8TE76 937 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 PLIN2Q99541 437 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 LRRC27Q9C0I9 530 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 NT5C3AQ9H0P0 336 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 CTNND2Q9UQB3 1225 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 GDAQ9Y2T3 454 aa16.84■□□□□ 0.29
SCAF11-204ENST00000395454 LRRC37A2A6NM11 1700 aa16.83■□□□□ 0.28
SCAF11-204ENST00000395454 IGLV3-22A0A075B6J6 115 aa16.83■□□□□ 0.28
SCAF11-204ENST00000395454 ADCY3O60266 1144 aa16.83■□□□□ 0.28
SCAF11-204ENST00000395454 STAM2O75886 525 aa16.83■□□□□ 0.28
SCAF11-204ENST00000395454 SNAI1O95863 264 aaPredicted RBP16.83■□□□□ 0.28
SCAF11-204ENST00000395454 EHHADHQ08426 723 aa16.83■□□□□ 0.28
SCAF11-204ENST00000395454 TBX2Q13207 712 aaPredicted RBP16.83■□□□□ 0.28
SCAF11-204ENST00000395454 ARID5BQ14865 1188 aa16.83■□□□□ 0.28
SCAF11-204ENST00000395454 GNPTABQ3T906 1256 aa16.83■□□□□ 0.28
SCAF11-204ENST00000395454 KLHL10Q6JEL2 608 aa16.83■□□□□ 0.28
SCAF11-204ENST00000395454 SEPT14Q6ZU15 432 aa16.83■□□□□ 0.28
SCAF11-204ENST00000395454 SV2BQ7L1I2 683 aa16.83■□□□□ 0.28
SCAF11-204ENST00000395454 CTAGE1Q96RT6 745 aa16.83■□□□□ 0.28
SCAF11-204ENST00000395454 MXRA8Q9BRK3 442 aa16.83■□□□□ 0.28
SCAF11-204ENST00000395454 WDR11Q9BZH6 1224 aa16.83■□□□□ 0.28
SCAF11-204ENST00000395454 PTCH2Q9Y6C5 1203 aa16.83■□□□□ 0.28
SCAF11-204ENST00000395454 STK24Q9Y6E0 443 aa16.83■□□□□ 0.28
SCAF11-204ENST00000395454 KIAA1217Q5T5P2 1943 aa16.83■□□□□ 0.28
SCAF11-204ENST00000395454 RGS20O76081 388 aa16.82■□□□□ 0.28
SCAF11-204ENST00000395454 MTMR1Q13613 665 aa16.82■□□□□ 0.28
SCAF11-204ENST00000395454 ARMCX5Q6P1M9 558 aa16.82■□□□□ 0.28
SCAF11-204ENST00000395454 NELFBQ8WX92 580 aa16.82■□□□□ 0.28
SCAF11-204ENST00000395454 CCDC47Q96A33 483 aaKnown RBP16.82■□□□□ 0.28
SCAF11-204ENST00000395454 DHTKD1Q96HY7 919 aaPredicted RBP16.82■□□□□ 0.28
SCAF11-204ENST00000395454 CDK5RAP3Q96JB5 506 aa16.82■□□□□ 0.28
SCAF11-204ENST00000395454 UIMC1Q96RL1 719 aa16.82■□□□□ 0.28
SCAF11-204ENST00000395454 ABHD16BQ9H3Z7 469 aa16.82■□□□□ 0.28
SCAF11-204ENST00000395454 LIMA1Q9UHB6 759 aaKnown RBP16.82■□□□□ 0.28
SCAF11-204ENST00000395454 ZHX1Q9UKY1 873 aaPredicted RBP16.82■□□□□ 0.28
SCAF11-204ENST00000395454 UBIAD1Q9Y5Z9 338 aa16.82■□□□□ 0.28
SCAF11-204ENST00000395454 PBX1P40424 430 aa16.82■□□□□ 0.28
SCAF11-204ENST00000395454 SETQ01105 290 aaPredicted RBP16.82■□□□□ 0.28
SCAF11-204ENST00000395454 SPAG1Q07617 926 aa16.82■□□□□ 0.28
SCAF11-204ENST00000395454 PRAMEF19Q5SWL8 479 aa16.82■□□□□ 0.28
SCAF11-204ENST00000395454 MFSD14CQ5VZR4 134 aa16.82■□□□□ 0.28
SCAF11-204ENST00000395454 FOXR2Q6PJQ5 311 aa16.82■□□□□ 0.28
SCAF11-204ENST00000395454 UNC13DQ70J99 1090 aa16.82■□□□□ 0.28
SCAF11-204ENST00000395454 KCNK18Q7Z418 384 aa16.82■□□□□ 0.28
SCAF11-204ENST00000395454 NLRX1Q86UT6 975 aa16.82■□□□□ 0.28
SCAF11-204ENST00000395454 KCTD17Q8N5Z5 321 aa16.82■□□□□ 0.28
SCAF11-204ENST00000395454 INPP4AQ96PE3 977 aaPredicted RBP16.82■□□□□ 0.28
SCAF11-204ENST00000395454 JADE2Q9NQC1 790 aa16.82■□□□□ 0.28
SCAF11-204ENST00000395454 MYMKA6NI61 221 aa16.81■□□□□ 0.28
SCAF11-204ENST00000395454 MEIS1O00470 390 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms