RNA–Protein interactions for RNA: ENST00000395366.2

PPP1CB-203, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 4,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-203ENST00000395366 SLC16A10Q8TF71 515 aa16.03■□□□□ 0.16
PPP1CB-203ENST00000395366 SCAF8Q9UPN6 1271 aaKnown RBP16.03■□□□□ 0.16
PPP1CB-203ENST00000395366 IGBP1P78318 339 aa16.02■□□□□ 0.16
PPP1CB-203ENST00000395366 NAALADL2Q58DX5 795 aa16.02■□□□□ 0.16
PPP1CB-203ENST00000395366 ARMC9Q7Z3E5 817 aa16.02■□□□□ 0.16
PPP1CB-203ENST00000395366 SLC5A4Q9NY91 659 aa16.02■□□□□ 0.16
PPP1CB-203ENST00000395366 RGL1Q9NZL6 768 aa16.02■□□□□ 0.16
PPP1CB-203ENST00000395366 LIMA1Q9UHB6 759 aaKnown RBP16.02■□□□□ 0.16
PPP1CB-203ENST00000395366 LONRF2Q1L5Z9 754 aa16.02■□□□□ 0.16
PPP1CB-203ENST00000395366 RNF187Q5TA31 235 aaPredicted RBP16.02■□□□□ 0.16
PPP1CB-203ENST00000395366 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.02■□□□□ 0.16
PPP1CB-203ENST00000395366 NSUN6Q8TEA1 469 aaKnown RBP16.02■□□□□ 0.16
PPP1CB-203ENST00000395366 ADAMTS1Q9UHI8 967 aa16.02■□□□□ 0.16
PPP1CB-203ENST00000395366 PCDHA13Q9Y5I0 950 aa16.02■□□□□ 0.16
PPP1CB-203ENST00000395366 IKBKGQ9Y6K9 419 aa16.02■□□□□ 0.16
PPP1CB-203ENST00000395366 ABCC6O95255 1503 aa16.02■□□□□ 0.15
PPP1CB-203ENST00000395366 MXI1P50539 228 aa16.02■□□□□ 0.15
PPP1CB-203ENST00000395366 MFAP3P55082 362 aa16.02■□□□□ 0.15
PPP1CB-203ENST00000395366 NEK9Q8TD19 979 aa16.02■□□□□ 0.15
PPP1CB-203ENST00000395366 FAM163AQ96GL9 167 aaPredicted RBP16.02■□□□□ 0.15
PPP1CB-203ENST00000395366 P4HBP07237 508 aaKnown RBP16.02■□□□□ 0.15
PPP1CB-203ENST00000395366 ARFGAP2Q8N6H7 521 aa16.02■□□□□ 0.15
PPP1CB-203ENST00000395366 RASSF4Q9H2L5 321 aa16.02■□□□□ 0.15
PPP1CB-203ENST00000395366 MYMKA6NI61 221 aa16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 ZBTB22O15209 634 aa16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 SARNPP82979 210 aaKnown RBP16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 CCZ1BP86790 482 aa16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 CCZ1P86791 482 aaPredicted RBP16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 GRIK5Q16478 980 aa16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 ATRIPQ8WXE1 791 aa16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 LXNQ9BS40 222 aa16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 RPAP3Q9H6T3 665 aaPredicted RBP16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 AGTPBP1Q9UPW5 1226 aa16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 GOLGA6BA6NDN3 693 aa16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 DDTLA6NHG4 134 aaPredicted RBP16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 QARSP47897 775 aaKnown RBP16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 KRT76Q01546 638 aa16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 KCNH2Q12809 1159 aa16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 FDX1P10109 184 aa16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 MTMR2Q13614 643 aa16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 LRRC45Q96CN5 670 aa16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 DDX41Q9UJV9 622 aaKnown RBP16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 ADGRG1Q9Y653 693 aa16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 PARP4Q9UKK3 1724 aaKnown RBP16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 A0A1W2PQC6 194 aa16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 KRIT1O00522 736 aa16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 MOCS3O95396 460 aa16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 TMEM191BP0C7N4 346 aa16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 CLUL1Q15846 466 aa16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 ZNF365Q70YC5 407 aa16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 TYW1Q9NV66 732 aaKnown RBP16.01■□□□□ 0.15
PPP1CB-203ENST00000395366 ZEB2O60315 1214 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 HMGCS2P54868 508 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 DPP9Q86TI2 863 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 LPAR1Q92633 364 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 STMN4Q9H169 189 aaPredicted RBP16■□□□□ 0.15
PPP1CB-203ENST00000395366 A0A1W2PRG0 241 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 GOLGA8IPA6NC78 632 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 GOLGA8JA6NMD2 632 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 TBX3O15119 743 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 WDR46O15213 610 aaKnown RBP16■□□□□ 0.15
PPP1CB-203ENST00000395366 R3HDM1Q15032 1099 aaKnown RBP16■□□□□ 0.15
PPP1CB-203ENST00000395366 EARS2Q5JPH6 523 aaKnown RBP16■□□□□ 0.15
PPP1CB-203ENST00000395366 CCDC105Q8IYK2 499 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 GIMAP8Q8ND71 665 aaPredicted RBP16■□□□□ 0.15
PPP1CB-203ENST00000395366 AGBL3Q8NEM8 1001 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 EHD4Q9H223 541 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 MYOZ2Q9NPC6 264 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 UBE2TQ9NPD8 197 aaPredicted RBP16■□□□□ 0.15
PPP1CB-203ENST00000395366 LRRC53A6NM62 1247 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 EYA4O95677 639 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 TNNC2P02585 160 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 PIK3CAP42336 1068 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 FXR2P51116 673 aaKnown RBP eCLIP16■□□□□ 0.151e-7■■■□□ 15.6
PPP1CB-203ENST00000395366 NR1I3Q14994 352 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 CEP72Q9P209 647 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 JRKLQ9Y4A0 524 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 PLSCR1O15162 318 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 TMOD1P28289 359 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 EPHA7Q15375 998 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 STXBP2Q15833 593 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 HINFPQ9BQA5 517 aa16■□□□□ 0.15
PPP1CB-203ENST00000395366 INO80B-WBP1J3KQ70 363 aa15.99■□□□□ 0.15
PPP1CB-203ENST00000395366 YWHAEP62258 255 aaKnown RBP15.99■□□□□ 0.15
PPP1CB-203ENST00000395366 PTK2Q05397 1052 aa15.99■□□□□ 0.15
PPP1CB-203ENST00000395366 JPH2Q9BR39 696 aaPredicted RBP15.99■□□□□ 0.15
PPP1CB-203ENST00000395366 MAK16Q9BXY0 300 aaKnown RBP15.99■□□□□ 0.15
PPP1CB-203ENST00000395366 INO80BQ9C086 356 aaPredicted RBP15.99■□□□□ 0.15
PPP1CB-203ENST00000395366 ASIC3Q9UHC3 531 aa15.99■□□□□ 0.15
PPP1CB-203ENST00000395366 NPHP3-ACAD11A0A0J9YXS1 232 aa15.99■□□□□ 0.15
PPP1CB-203ENST00000395366 OAS2P29728 719 aaKnown RBP15.99■□□□□ 0.15
PPP1CB-203ENST00000395366 C15orf52Q6ZUT6 534 aaKnown RBP15.99■□□□□ 0.15
PPP1CB-203ENST00000395366 SEL1LQ9UBV2 794 aa15.99■□□□□ 0.15
PPP1CB-203ENST00000395366 FBXO40Q9UH90 709 aa15.99■□□□□ 0.15
PPP1CB-203ENST00000395366 NOD1Q9Y239 953 aa15.99■□□□□ 0.15
PPP1CB-203ENST00000395366 SLC37A4O43826 429 aa15.99■□□□□ 0.15
PPP1CB-203ENST00000395366 DDX4Q9NQI0 724 aaKnown RBP15.99■□□□□ 0.15
PPP1CB-203ENST00000395366 PPP1R3GB7ZBB8 358 aa15.99■□□□□ 0.15
PPP1CB-203ENST00000395366 CXCR5P32302 372 aa15.99■□□□□ 0.15
PPP1CB-203ENST00000395366 MTF1Q14872 753 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms