RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 TCP11Q8WWU5 503 aa17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.93■□□□□ 0.461e-6■□□□□ 9.7
EFEMP1-202ENST00000394555 TRIM51Q9BSJ1 452 aa17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 PRPF4BQ13523 1007 aaKnown RBP17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 NAA25Q14CX7 972 aa17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 PARP10Q53GL7 1025 aa17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 PNMA8AQ86V59 439 aaPredicted RBP17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 CCT6BQ92526 530 aa17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 CELF1Q92879 486 aaKnown RBP17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 NPHP3-ACAD11A0A0J9YXS1 232 aa17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 CLTAP09496 248 aa17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 SLC9A1P19634 815 aa17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 DRD4P21917 467 aa17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 AGBL2Q5U5Z8 902 aa17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 ALKBH5Q6P6C2 394 aaKnown RBP17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 BICDL1Q6ZP65 573 aa17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 PROM2Q8N271 834 aa17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 C3orf20Q8ND61 904 aa17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 ACTRT1Q8TDG2 376 aa17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 CHMP6Q96FZ7 201 aa17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 F8W031 263 aaPredicted RBP17.92■□□□□ 0.46
EFEMP1-202ENST00000394555 CAND2O75155 1236 aa17.92■□□□□ 0.46
EFEMP1-202ENST00000394555 NEBLO76041 1014 aa17.92■□□□□ 0.46
EFEMP1-202ENST00000394555 GCFC2P16383 781 aaKnown RBP17.92■□□□□ 0.46
EFEMP1-202ENST00000394555 COPB2P35606 906 aa17.92■□□□□ 0.46
EFEMP1-202ENST00000394555 ACCSLQ4AC99 568 aa17.92■□□□□ 0.46
EFEMP1-202ENST00000394555 ERFEQ4G0M1 354 aa17.92■□□□□ 0.46
EFEMP1-202ENST00000394555 DAAM2Q86T65 1068 aa17.92■□□□□ 0.46
EFEMP1-202ENST00000394555 MTMR9Q96QG7 549 aa17.92■□□□□ 0.46
EFEMP1-202ENST00000394555 A0A1B0GUL6 1792 aa17.92■□□□□ 0.46
EFEMP1-202ENST00000394555 MYH4Q9Y623 1939 aa17.92■□□□□ 0.46
EFEMP1-202ENST00000394555 F8VZ95 297 aa17.92■□□□□ 0.46
EFEMP1-202ENST00000394555 HIBADHP31937 336 aaKnown RBP17.92■□□□□ 0.46
EFEMP1-202ENST00000394555 KCNH2Q12809 1159 aa17.92■□□□□ 0.46
EFEMP1-202ENST00000394555 ADAM9Q13443 819 aa17.92■□□□□ 0.46
EFEMP1-202ENST00000394555 SH3RF3Q8TEJ3 882 aaPredicted RBP17.92■□□□□ 0.46
EFEMP1-202ENST00000394555 COA7Q96BR5 231 aa17.92■□□□□ 0.46
EFEMP1-202ENST00000394555 AIPL1Q9NZN9 384 aa17.92■□□□□ 0.46
EFEMP1-202ENST00000394555 UTP11Q9Y3A2 253 aaKnown RBP17.92■□□□□ 0.46
EFEMP1-202ENST00000394555 TRIM37O94972 964 aa17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 CAMTA2O94983 1202 aa17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 CRKLP46109 303 aaKnown RBP17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 XRCC4Q13426 336 aa17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 ZCWPW2Q504Y3 356 aa17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 INTS5Q6P9B9 1019 aaKnown RBP17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 TRIM59Q8IWR1 403 aa17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 CCDC197Q8NCU1 140 aa17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 CCDC26Q8TAB7 109 aa17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 TGFBRAP1Q8WUH2 860 aa17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 XPO6Q96QU8 1125 aaKnown RBP17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 RAB34Q9BZG1 259 aa17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 MYH7BA7E2Y1 1941 aa17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 C5orf60A6NFR6 353 aa17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 SLC8A1P32418 973 aa17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 TNNI2P48788 182 aa17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 ELF3P78545 371 aaPredicted RBP17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 PSMD2Q13200 908 aa17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 FAM133BQ5BKY9 247 aaKnown RBP17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 HERC4Q5GLZ8 1057 aaPredicted RBP17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 UHMK1Q8TAS1 419 aaKnown RBP17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 NOD2Q9HC29 1040 aa17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 CCDC87Q9NVE4 849 aa17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 NAGPAQ9UK23 515 aa17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 SHANK3Q9BYB0 1731 aa17.91■□□□□ 0.46
EFEMP1-202ENST00000394555 SHBGP04278 402 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 IFI16Q16666 785 aaKnown RBP17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 BRINP3Q76B58 766 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 TBC1D1Q86TI0 1168 aaPredicted RBP17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 LRRC57Q8N9N7 239 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 BSDC1Q9NW68 430 aaPredicted RBP17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 SWAP70Q9UH65 585 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 TAF1P21675 1872 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 ATP6V1G2O95670 118 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 CHN1P15882 459 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 LACTB2Q53H82 288 aaPredicted RBP17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 FBXO33Q7Z6M2 555 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 MAPKAPK5Q8IW41 473 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 TPCN2Q8NHX9 752 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 DNAJC19Q96DA6 116 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 SLC24A3Q9HC58 644 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 BMP2KQ9NSY1 1161 aaPredicted RBP17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 GGT7Q9UJ14 662 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 NR2E1Q9Y466 385 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 BCL9O00512 1426 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 CCT8L1PA6NM43 557 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 BUB1BO60566 1050 aaPredicted RBP17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 FGGP02679 453 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 MMEP08473 750 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 PPP2R5AQ15172 486 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 DIXDC1Q155Q3 683 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 ARMC9Q7Z3E5 817 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 IRF2BP2Q7Z5L9 587 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 EIF1ADQ8N9N8 165 aaKnown RBP17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 GANQ9H2C0 597 aa17.9■□□□□ 0.46
EFEMP1-202ENST00000394555 E9PMD0 336 aa17.89■□□□□ 0.45
EFEMP1-202ENST00000394555 SKAP2O75563 359 aaPredicted RBP17.89■□□□□ 0.45
EFEMP1-202ENST00000394555 FXR2P51116 673 aaKnown RBP eCLIP17.89■□□□□ 0.45
EFEMP1-202ENST00000394555 ANKS4BQ8N8V4 417 aa17.89■□□□□ 0.45
EFEMP1-202ENST00000394555 THOC1Q96FV9 657 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms