RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 AOX1Q06278 1338 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 TSPAN9O75954 239 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 CASP8Q14790 479 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 RYBPQ8N488 228 aaPredicted RBP14.35□□□□□ -0.11
USP49-203ENST00000394253 DDHD1Q8NEL9 900 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 MTERF3Q96E29 417 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 WDR91A4D1P6 747 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 TJP3O95049 919 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 RXRAP19793 462 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 HDLBPQ00341 1268 aaKnown RBP14.35□□□□□ -0.11
USP49-203ENST00000394253 ARL13BQ3SXY8 428 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 GPBP1Q86WP2 473 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 HSPA9P38646 679 aaKnown RBP14.35□□□□□ -0.11
USP49-203ENST00000394253 AIPL1Q9NZN9 384 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 FAM32AQ9Y421 112 aaKnown RBP14.35□□□□□ -0.11
USP49-203ENST00000394253 ADCK5Q3MIX3 580 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 NLRX1Q86UT6 975 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 KIRREL3Q8IZU9 778 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 TTC8Q8TAM2 541 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 MAGEB5Q9BZ81 275 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 PANK4Q9NVE7 773 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 SLC5A4Q9NY91 659 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 ARHGEF37A1IGU5 675 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 RALBP11234 206 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 MFAP3P55082 362 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 KRT76Q01546 638 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 AASDHQ4L235 1098 aaPredicted RBP14.35□□□□□ -0.11
USP49-203ENST00000394253 TUBGCP2Q9BSJ2 902 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 F8W031 263 aaPredicted RBP14.34□□□□□ -0.11
USP49-203ENST00000394253 TMOD1P28289 359 aa14.34□□□□□ -0.11
USP49-203ENST00000394253 SLC1A4P43007 532 aa14.34□□□□□ -0.11
USP49-203ENST00000394253 MICALL2Q8IY33 904 aa14.34□□□□□ -0.11
USP49-203ENST00000394253 UHMK1Q8TAS1 419 aaKnown RBP14.34□□□□□ -0.11
USP49-203ENST00000394253 SPATA17Q96L03 361 aa14.34□□□□□ -0.11
USP49-203ENST00000394253 GOLPH3LQ9H4A5 285 aa14.34□□□□□ -0.11
USP49-203ENST00000394253 PDE4DIPQ5VU43 2346 aa14.34□□□□□ -0.11
USP49-203ENST00000394253 MAP3K13O43283 966 aa14.34□□□□□ -0.11
USP49-203ENST00000394253 ACSL3O95573 720 aa14.34□□□□□ -0.11
USP49-203ENST00000394253 SERPINB3P29508 390 aa14.34□□□□□ -0.11
USP49-203ENST00000394253 HIC1Q14526 733 aa14.34□□□□□ -0.11
USP49-203ENST00000394253 GPCPD1Q9NPB8 672 aa14.34□□□□□ -0.11
USP49-203ENST00000394253 MSH6P52701 1360 aa14.34□□□□□ -0.11
USP49-203ENST00000394253 ARHGAP17Q68EM7 881 aa14.34□□□□□ -0.11
USP49-203ENST00000394253 CCNYQ8ND76 341 aa14.34□□□□□ -0.11
USP49-203ENST00000394253 DIS3Q9Y2L1 958 aaKnown RBP14.34□□□□□ -0.11
USP49-203ENST00000394253 SNTNA6NMZ2 147 aa14.34□□□□□ -0.11
USP49-203ENST00000394253 RSPH10B2B2RC85 870 aa14.34□□□□□ -0.11
USP49-203ENST00000394253 RSPH10BP0C881 870 aa14.34□□□□□ -0.11
USP49-203ENST00000394253 MRPS35P82673 323 aaKnown RBP14.34□□□□□ -0.11
USP49-203ENST00000394253 FAM45BPQ6NSW5 357 aa14.34□□□□□ -0.11
USP49-203ENST00000394253 ABCE1P61221 599 aaKnown RBP14.34□□□□□ -0.11
USP49-203ENST00000394253 MESDQ14696 234 aa14.34□□□□□ -0.11
USP49-203ENST00000394253 KPNB1Q14974 876 aaKnown RBP14.34□□□□□ -0.11
USP49-203ENST00000394253 ZC3H12CQ9C0D7 883 aaKnown RBP14.34□□□□□ -0.11
USP49-203ENST00000394253 CUEDC2Q9H467 287 aa14.34□□□□□ -0.11
USP49-203ENST00000394253 MYL7Q01449 175 aa14.33□□□□□ -0.11
USP49-203ENST00000394253 CABP7Q86V35 215 aa14.33□□□□□ -0.11
USP49-203ENST00000394253 TPH2Q8IWU9 490 aa14.33□□□□□ -0.11
USP49-203ENST00000394253 BBS2Q9BXC9 721 aa14.33□□□□□ -0.11
USP49-203ENST00000394253 PARP3Q9Y6F1 533 aa14.33□□□□□ -0.11
USP49-203ENST00000394253 K7ENM7 598 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 GCFC2P16383 781 aaKnown RBP14.33□□□□□ -0.12
USP49-203ENST00000394253 KCNA3P22001 575 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 PCDHB4Q9Y5E5 795 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 DLATP10515 647 aaKnown RBP14.33□□□□□ -0.12
USP49-203ENST00000394253 CYGBQ8WWM9 190 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 NARS2Q96I59 477 aaKnown RBP14.33□□□□□ -0.12
USP49-203ENST00000394253 ECT2Q9H8V3 914 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 MYCLP12524 364 aaPredicted RBP14.33□□□□□ -0.12
USP49-203ENST00000394253 KRT26Q7Z3Y9 468 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 USHBP1Q8N6Y0 703 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 VIPAS39Q9H9C1 493 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 MAST3O60307 1309 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 FAM161BQ96MY7 647 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 HACD3Q9P035 362 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 TEX28O15482 410 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 DYMQ7RTS9 669 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 TGS1Q96RS0 853 aaKnown RBP14.33□□□□□ -0.12
USP49-203ENST00000394253 MMTAG2Q9BU76 263 aaKnown RBP14.33□□□□□ -0.12
USP49-203ENST00000394253 COL4A3BPQ9Y5P4 624 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 SMARCA4P51532 1647 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 POGZQ7Z3K3 1410 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 HSPA13P48723 471 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 CC2D2BQ6DHV5 1058 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 RMDN1Q96DB5 314 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 TESK2Q96S53 571 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 FSD1LQ9BXM9 530 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 PCDHGB4Q9UN71 923 aa14.33□□□□□ -0.12
USP49-203ENST00000394253 GMNCA6NCL1 334 aa14.32□□□□□ -0.12
USP49-203ENST00000394253 SAC3D1A6NKF1 404 aa14.32□□□□□ -0.12
USP49-203ENST00000394253 IGHDP01880 384 aa14.32□□□□□ -0.12
USP49-203ENST00000394253 CIITAP33076 1130 aa14.32□□□□□ -0.12
USP49-203ENST00000394253 SLCO1A2P46721 670 aa14.32□□□□□ -0.12
USP49-203ENST00000394253 TBC1D9BQ66K14 1250 aa14.32□□□□□ -0.12
USP49-203ENST00000394253 JDP2Q8WYK2 163 aa14.32□□□□□ -0.12
USP49-203ENST00000394253 RUBCNQ92622 972 aa14.32□□□□□ -0.12
USP49-203ENST00000394253 OLFML3Q9NRN5 406 aa14.32□□□□□ -0.12
USP49-203ENST00000394253 TMEM161AQ9NX61 479 aa14.32□□□□□ -0.12
USP49-203ENST00000394253 TLR3O15455 904 aaKnown RBP14.32□□□□□ -0.12
USP49-203ENST00000394253 ZNF189O75820 626 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms