RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 CALM3P0DP25 149 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 TXNP10599 105 aaKnown RBP12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 PDCP20941 246 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 GJB2P29033 226 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 BMPR1AP36894 532 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 HMGN5P82970 282 aaKnown RBP12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 PDE4DQ08499 809 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 ST3GAL1Q11201 340 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 BAATQ14032 418 aaPredicted RBP12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 PUM1Q14671 1186 aaKnown RBP eCLIP12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 MICU3Q86XE3 530 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 ZNF654Q8IZM8 581 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 FIBCD1Q8N539 461 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 CEP95Q96GE4 821 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 IFIH1Q9BYX4 1025 aaKnown RBP12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 KAT14Q9H8E8 782 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 MTMR4Q9NYA4 1195 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 CLEC1BQ9P126 229 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 HDAC6Q9UBN7 1215 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 CCPG1Q9ULG6 757 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 DNAH14Q0VDD8 3507 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 ZNF292O60281 2723 aa12.67□□□□□ -0.38
VTI1BP2-201ENST00000394154 NMT2O60551 498 aa12.67□□□□□ -0.38
VTI1BP2-201ENST00000394154 CDKL5O76039 1030 aa12.67□□□□□ -0.38
VTI1BP2-201ENST00000394154 DDAH1O94760 285 aa12.67□□□□□ -0.38
VTI1BP2-201ENST00000394154 ATF7P17544 494 aaPredicted RBP12.67□□□□□ -0.38
VTI1BP2-201ENST00000394154 ZBTB33Q86T24 672 aa12.67□□□□□ -0.38
VTI1BP2-201ENST00000394154 EFHBQ8N7U6 833 aa12.67□□□□□ -0.38
VTI1BP2-201ENST00000394154 TMEM105Q8N8V8 129 aa12.67□□□□□ -0.38
VTI1BP2-201ENST00000394154 AFG1LQ8WV93 481 aa12.67□□□□□ -0.38
VTI1BP2-201ENST00000394154 SEPT8Q92599 483 aa12.67□□□□□ -0.38
VTI1BP2-201ENST00000394154 KAT2BQ92831 832 aa12.67□□□□□ -0.38
VTI1BP2-201ENST00000394154 GMCL1Q96IK5 515 aa12.67□□□□□ -0.38
VTI1BP2-201ENST00000394154 KATNAL1Q9BW62 490 aa12.67□□□□□ -0.38
VTI1BP2-201ENST00000394154 NCOA5Q9HCD5 579 aaKnown RBP12.67□□□□□ -0.38
VTI1BP2-201ENST00000394154 IL17RBQ9NRM6 502 aa12.67□□□□□ -0.38
VTI1BP2-201ENST00000394154 RSPH10B2B2RC85 870 aa12.66□□□□□ -0.38
VTI1BP2-201ENST00000394154 RSPH10BP0C881 870 aa12.66□□□□□ -0.38
VTI1BP2-201ENST00000394154 SLC1A4P43007 532 aa12.66□□□□□ -0.38
VTI1BP2-201ENST00000394154 RTN1Q16799 776 aa12.66□□□□□ -0.38
VTI1BP2-201ENST00000394154 RCSD1Q6JBY9 416 aa12.66□□□□□ -0.38
VTI1BP2-201ENST00000394154 RAB11FIP4Q86YS3 637 aa12.66□□□□□ -0.38
VTI1BP2-201ENST00000394154 FAM184AQ8NB25 1140 aa12.66□□□□□ -0.38
VTI1BP2-201ENST00000394154 FANCBQ8NB91 859 aa12.66□□□□□ -0.38
VTI1BP2-201ENST00000394154 NSUN7Q8NE18 718 aaKnown RBP12.66□□□□□ -0.38
VTI1BP2-201ENST00000394154 SMARCC2Q8TAQ2 1214 aa12.66□□□□□ -0.38
VTI1BP2-201ENST00000394154 WNT8BQ93098 351 aa12.66□□□□□ -0.38
VTI1BP2-201ENST00000394154 NCOR2Q9Y618 2525 aa12.66□□□□□ -0.38
VTI1BP2-201ENST00000394154 PLIN4Q96Q06 1357 aa12.66□□□□□ -0.38
VTI1BP2-201ENST00000394154 MYH6P13533 1939 aa12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 PTPDC1A2A3K4 754 aa12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 CSPG5O95196 566 aa12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 ARIH2O95376 493 aa12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 ICAM1P05362 532 aa12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 LINC00271P0C7V0 271 aa12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 TOP1P11387 765 aaKnown RBP12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 EDNRBP24530 442 aa12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 ADD1P35611 737 aaKnown RBP12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 SNAP25P60880 206 aa12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 DGKDQ16760 1214 aa12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 LARP1BQ659C4 914 aaKnown RBP12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 PNMA1Q8ND90 353 aa12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 CLP1Q92989 425 aaKnown RBP12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 MAP3K14Q99558 947 aa12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 MYL10Q9BUA6 226 aa12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 PLVAPQ9BX97 442 aa12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 RBM28Q9NW13 759 aaKnown RBP12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 PRR12Q9ULL5 1215 aa12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 STX8Q9UNK0 236 aa12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 TPRP12270 2363 aaKnown RBP12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 NID2Q14112 1375 aa12.65□□□□□ -0.38
VTI1BP2-201ENST00000394154 ADGRA3Q8IWK6 1321 aa12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 B4DLN1 442 aa12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 NFIBO00712 420 aa12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 JAK2O60674 1132 aa12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 CTDNEP1O95476 244 aa12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 GH1P01241 217 aa12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 RXRAP19793 462 aa12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 CALML3P27482 149 aa12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 CDC27P30260 824 aa12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 KIF5BP33176 963 aa12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 THPOP40225 353 aa12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 PSEN2P49810 448 aa12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 MRPL12P52815 198 aaKnown RBP12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 SSRP1Q08945 709 aaKnown RBP12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 TROAPQ12815 778 aa12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 MFSD10Q14728 455 aa12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 ASTLQ6HA08 431 aaPredicted RBP12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 UBALD2Q8IYN6 164 aa12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 DNERQ8NFT8 737 aa12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 CTCFLQ8NI51 663 aaPredicted RBP12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 SUSD6Q92537 303 aa12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 TMEM47Q9BQJ4 181 aa12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 ALG1Q9BT22 464 aa12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 ORC3Q9UBD5 711 aaPredicted RBP12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 BARX2Q9UMQ3 279 aaPredicted RBP12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 BAZ2BQ9UIF8 2168 aaKnown RBP12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 BAHCC1Q9P281 2608 aa12.64□□□□□ -0.39
VTI1BP2-201ENST00000394154 WDR87Q6ZQQ6 2873 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms