RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 ATF5Q9Y2D1 282 aaPredicted RBP15.31■□□□□ 0.04
GAPVD1-205ENST00000394084 GRIN2DO15399 1336 aa15.31■□□□□ 0.04
GAPVD1-205ENST00000394084 CACNB3P54284 484 aa15.3■□□□□ 0.04
GAPVD1-205ENST00000394084 PAK2Q13177 524 aa15.3■□□□□ 0.04
GAPVD1-205ENST00000394084 NNTQ13423 1086 aa15.3■□□□□ 0.04
GAPVD1-205ENST00000394084 GLE1Q53GS7 698 aaKnown RBP15.3■□□□□ 0.04
GAPVD1-205ENST00000394084 HYIQ5T013 277 aa15.3■□□□□ 0.04
GAPVD1-205ENST00000394084 ZFPM1Q8IX07 1006 aa15.3■□□□□ 0.04
GAPVD1-205ENST00000394084 TAF4BQ92750 862 aa15.3■□□□□ 0.04
GAPVD1-205ENST00000394084 PCDHGC5Q9Y5F6 944 aa15.3■□□□□ 0.04
GAPVD1-205ENST00000394084 EIF3HO15372 352 aaKnown RBP eCLIP15.3■□□□□ 0.04
GAPVD1-205ENST00000394084 RAD51CO43502 376 aa15.3■□□□□ 0.04
GAPVD1-205ENST00000394084 ZNF571Q7Z3V5 609 aaPredicted RBP15.3■□□□□ 0.04
GAPVD1-205ENST00000394084 SFR1Q86XK3 245 aa15.3■□□□□ 0.04
GAPVD1-205ENST00000394084 INPP4AQ96PE3 977 aaPredicted RBP15.3■□□□□ 0.04
GAPVD1-205ENST00000394084 BBOX1O75936 387 aa15.3■□□□□ 0.04
GAPVD1-205ENST00000394084 CYP4A11Q02928 519 aa15.3■□□□□ 0.04
GAPVD1-205ENST00000394084 FOXR2Q6PJQ5 311 aa15.3■□□□□ 0.04
GAPVD1-205ENST00000394084 PACS2Q86VP3 889 aa15.3■□□□□ 0.04
GAPVD1-205ENST00000394084 CATSPER3Q86XQ3 398 aa15.3■□□□□ 0.04
GAPVD1-205ENST00000394084 CERKQ8TCT0 537 aa15.3■□□□□ 0.04
GAPVD1-205ENST00000394084 AIPL1Q9NZN9 384 aa15.3■□□□□ 0.04
GAPVD1-205ENST00000394084 RNF14Q9UBS8 474 aa15.3■□□□□ 0.04
GAPVD1-205ENST00000394084 ZEB2O60315 1214 aa15.29■□□□□ 0.04
GAPVD1-205ENST00000394084 MYBP10242 640 aa15.29■□□□□ 0.04
GAPVD1-205ENST00000394084 GYS1P13807 737 aa15.29■□□□□ 0.04
GAPVD1-205ENST00000394084 TNFRSF8P28908 595 aa15.29■□□□□ 0.04
GAPVD1-205ENST00000394084 SLC12A3P55017 1021 aa15.29■□□□□ 0.04
GAPVD1-205ENST00000394084 TCP10Q12799 353 aa15.29■□□□□ 0.04
GAPVD1-205ENST00000394084 CDC37Q16543 378 aaPredicted RBP15.29■□□□□ 0.04
GAPVD1-205ENST00000394084 P2RX7Q99572 595 aaKnown RBP15.29■□□□□ 0.04
GAPVD1-205ENST00000394084 KCNMB3Q9NPA1 279 aa15.29■□□□□ 0.04
GAPVD1-205ENST00000394084 ARMCX3Q9UH62 379 aaPredicted RBP15.29■□□□□ 0.04
GAPVD1-205ENST00000394084 ZNF233A6NK53 670 aa15.29■□□□□ 0.04
GAPVD1-205ENST00000394084 EBAG9O00559 213 aa15.29■□□□□ 0.04
GAPVD1-205ENST00000394084 MARSP56192 900 aaKnown RBP15.29■□□□□ 0.04
GAPVD1-205ENST00000394084 HLTFQ14527 1009 aaKnown RBP eCLIP15.29■□□□□ 0.04
GAPVD1-205ENST00000394084 RPS6KA1Q15418 735 aa15.29■□□□□ 0.04
GAPVD1-205ENST00000394084 USH1GQ495M9 461 aa15.29■□□□□ 0.04
GAPVD1-205ENST00000394084 CDC42EP5Q6NZY7 148 aa15.29■□□□□ 0.04
GAPVD1-205ENST00000394084 REEP2Q9BRK0 252 aa15.29■□□□□ 0.04
GAPVD1-205ENST00000394084 SWAP70Q9UH65 585 aa15.29■□□□□ 0.04
GAPVD1-205ENST00000394084 SHTN1A0MZ66 631 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 RSPH10B2B2RC85 870 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 CEP104O60308 925 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 RSPH10BP0C881 870 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 TTC31Q49AM3 519 aaPredicted RBP15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 GJB7Q6PEY0 223 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 ARHGAP27Q6ZUM4 889 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 AP1M1Q9BXS5 423 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 CLIC2O15247 247 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 HLA-DOAP06340 250 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 EPB41P11171 864 aaKnown RBP15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 UCHL3P15374 230 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 HOXA7P31268 230 aaPredicted RBP15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 GIT2Q14161 759 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 GBP6Q6ZN66 633 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 IRF2BP2Q7Z5L9 587 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 USP38Q8NB14 1042 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 ARFGEF1Q9Y6D6 1849 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 TMCO5BA8MYB1 307 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 EEF2P13639 858 aaKnown RBP15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 CASP4P49662 377 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 SLC30A10Q6XR72 485 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 MAATS1Q7Z4T9 603 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 IQCKQ8N0W5 287 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 MICALL1Q8N3F8 863 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 IKZF4Q9H2S9 585 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 CENPHQ9H3R5 247 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 AJAP1Q9UKB5 411 aaPredicted RBP15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 PCDHAC2Q9Y5I4 1007 aa15.28■□□□□ 0.04
GAPVD1-205ENST00000394084 AFPP02771 609 aaKnown RBP15.27■□□□□ 0.04
GAPVD1-205ENST00000394084 HOXD13P35453 343 aa15.27■□□□□ 0.04
GAPVD1-205ENST00000394084 LIG3P49916 1009 aa15.27■□□□□ 0.04
GAPVD1-205ENST00000394084 ARHGAP4P98171 946 aa15.27■□□□□ 0.04
GAPVD1-205ENST00000394084 EXOC3L4Q17RC7 722 aa15.27■□□□□ 0.04
GAPVD1-205ENST00000394084 EDRF1Q3B7T1 1238 aa15.27■□□□□ 0.04
GAPVD1-205ENST00000394084 SLFN13Q68D06 897 aa15.27■□□□□ 0.04
GAPVD1-205ENST00000394084 DDX42Q86XP3 938 aaKnown RBP eCLIP15.27■□□□□ 0.04
GAPVD1-205ENST00000394084 RBM46Q8TBY0 533 aaKnown RBP15.27■□□□□ 0.04
GAPVD1-205ENST00000394084 PIK3R5Q8WYR1 880 aa15.27■□□□□ 0.04
GAPVD1-205ENST00000394084 FAM169AQ9Y6X4 670 aa15.27■□□□□ 0.04
GAPVD1-205ENST00000394084 SFI1A8K8P3 1242 aa15.27■□□□□ 0.03
GAPVD1-205ENST00000394084 AKAP3O75969 853 aa15.27■□□□□ 0.03
GAPVD1-205ENST00000394084 PON1P27169 355 aa15.27■□□□□ 0.03
GAPVD1-205ENST00000394084 TNNC1P63316 161 aa15.27■□□□□ 0.03
GAPVD1-205ENST00000394084 KCNA1Q09470 495 aa15.27■□□□□ 0.03
GAPVD1-205ENST00000394084 IKQ13123 557 aaPredicted RBP15.27■□□□□ 0.03
GAPVD1-205ENST00000394084 KNOP1Q1ED39 458 aaKnown RBP15.27■□□□□ 0.03
GAPVD1-205ENST00000394084 RNPC3Q96LT9 517 aaKnown RBP15.27■□□□□ 0.03
GAPVD1-205ENST00000394084 DNM3Q9UQ16 869 aa15.27■□□□□ 0.03
GAPVD1-205ENST00000394084 PPEF1O14829 653 aaPredicted RBP15.26■□□□□ 0.03
GAPVD1-205ENST00000394084 KIF4AO95239 1232 aa15.26■□□□□ 0.03
GAPVD1-205ENST00000394084 XRCC5P13010 732 aaKnown RBP15.26■□□□□ 0.03
GAPVD1-205ENST00000394084 GUCY1A3Q02108 690 aa15.26■□□□□ 0.03
GAPVD1-205ENST00000394084 ALKBH5Q6P6C2 394 aaKnown RBP15.26■□□□□ 0.03
GAPVD1-205ENST00000394084 PPM1EQ8WY54 764 aa15.26■□□□□ 0.03
GAPVD1-205ENST00000394084 NAP1L4Q99733 375 aaKnown RBP15.26■□□□□ 0.03
GAPVD1-205ENST00000394084 ZC3H12CQ9C0D7 883 aaKnown RBP15.26■□□□□ 0.03
GAPVD1-205ENST00000394084 DNAJC18Q9H819 358 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms