RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 ITGB3BPQ13352 177 aaPredicted RBP12.15□□□□□ -0.46
CASP3-202ENST00000393585 TKFCQ3LXA3 575 aa12.15□□□□□ -0.46
CASP3-202ENST00000393585 CCDC40Q4G0X9 1142 aa12.15□□□□□ -0.46
CASP3-202ENST00000393585 B3GNT9Q6UX72 402 aa12.15□□□□□ -0.46
CASP3-202ENST00000393585 RNF207Q6ZRF8 634 aa12.15□□□□□ -0.46
CASP3-202ENST00000393585 KRT26Q7Z3Y9 468 aa12.15□□□□□ -0.46
CASP3-202ENST00000393585 TMTC1Q8IUR5 882 aa12.15□□□□□ -0.46
CASP3-202ENST00000393585 OR8K1Q8NGG5 319 aa12.15□□□□□ -0.46
CASP3-202ENST00000393585 ERGIC2Q96RQ1 377 aa12.15□□□□□ -0.46
CASP3-202ENST00000393585 LXNQ9BS40 222 aa12.15□□□□□ -0.46
CASP3-202ENST00000393585 RNF146Q9NTX7 359 aa12.15□□□□□ -0.46
CASP3-202ENST00000393585 COL4A3BPQ9Y5P4 624 aa12.15□□□□□ -0.46
CASP3-202ENST00000393585 PHIPQ8WWQ0 1821 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 EPHB6O15197 1021 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 CTIFO43310 598 aaKnown RBP12.14□□□□□ -0.47
CASP3-202ENST00000393585 TBCAO75347 108 aaKnown RBP12.14□□□□□ -0.47
CASP3-202ENST00000393585 GNG11P61952 73 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 GHRHRQ02643 423 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 PGM5Q15124 567 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 EPHA7Q15375 998 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 SNRNP48Q6IEG0 339 aaKnown RBP12.14□□□□□ -0.47
CASP3-202ENST00000393585 WDR59Q6PJI9 974 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 WDR24Q96S15 920 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 RMDN3Q96TC7 470 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 DNAJC7Q99615 494 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 FAM207AQ9NSI2 230 aaPredicted RBP12.14□□□□□ -0.47
CASP3-202ENST00000393585 RLFQ13129 1914 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 DHX15O43143 795 aaKnown RBP12.14□□□□□ -0.47
CASP3-202ENST00000393585 KIF20AO95235 890 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 ABL1P00519 1130 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 HOXD13P35453 343 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 KCNA1Q09470 495 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 MTMR1Q13613 665 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 PCNX4Q63HM2 1172 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 MIER3Q7Z3K6 550 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 GPIHBP1Q8IV16 184 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 SMCR8Q8TEV9 937 aaPredicted RBP12.14□□□□□ -0.47
CASP3-202ENST00000393585 RIT2Q99578 217 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 RNF181Q9P0P0 153 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.14□□□□□ -0.47
CASP3-202ENST00000393585 ZNF215Q9UL58 517 aaPredicted RBP12.14□□□□□ -0.47
CASP3-202ENST00000393585 UBIAD1Q9Y5Z9 338 aa12.14□□□□□ -0.47
CASP3-202ENST00000393585 V9GYY5 206 aaPredicted RBP12.14□□□□□ -0.47
CASP3-202ENST00000393585 PHLPP2Q6ZVD8 1323 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 GOLGA6L9A6NEM1 432 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 GCNT3O95395 438 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 BCRP11274 1271 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 ADAM9Q13443 819 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 BAATQ14032 418 aaPredicted RBP12.13□□□□□ -0.47
CASP3-202ENST00000393585 C1orf186Q6ZWK4 172 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 TRMT1LQ7Z2T5 733 aaKnown RBP12.13□□□□□ -0.47
CASP3-202ENST00000393585 ZNF710Q8N1W2 664 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 REPS2Q8NFH8 660 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.13□□□□□ -0.47
CASP3-202ENST00000393585 PDCD2LQ9BRP1 358 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 MMRN2Q9H8L6 949 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 SIK3Q9Y2K2 1263 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 SAMM50Q9Y512 469 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 TESPA1A2RU30 521 aaPredicted RBP12.13□□□□□ -0.47
CASP3-202ENST00000393585 ADM5C9JUS6 153 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 USP2O75604 605 aaPredicted RBP12.13□□□□□ -0.47
CASP3-202ENST00000393585 FAM13AO94988 1023 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 NR2F2P24468 414 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 TMEM132BQ14DG7 1078 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 ARHGEF16Q5VV41 709 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 FOXR2Q6PJQ5 311 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 EPM2AIP1Q7L775 607 aaPredicted RBP12.13□□□□□ -0.47
CASP3-202ENST00000393585 C12orf42Q96LP6 360 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 NACC1Q96RE7 527 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 NUP58Q9BVL2 599 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 IKZF4Q9H2S9 585 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 AGO4Q9HCK5 861 aaKnown RBP12.13□□□□□ -0.47
CASP3-202ENST00000393585 JADE2Q9NQC1 790 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 PXMP2Q9NR77 195 aa12.13□□□□□ -0.47
CASP3-202ENST00000393585 ZNF214Q9UL59 606 aaPredicted RBP12.13□□□□□ -0.47
CASP3-202ENST00000393585 C19orf81C9J6K1 198 aa12.12□□□□□ -0.47
CASP3-202ENST00000393585 ATP9AO75110 1047 aa12.12□□□□□ -0.47
CASP3-202ENST00000393585 TUBB4AP04350 444 aa12.12□□□□□ -0.47
CASP3-202ENST00000393585 NMT1P30419 496 aaKnown RBP12.12□□□□□ -0.47
CASP3-202ENST00000393585 COG2Q14746 738 aa12.12□□□□□ -0.47
CASP3-202ENST00000393585 KNOP1Q1ED39 458 aaKnown RBP12.12□□□□□ -0.47
CASP3-202ENST00000393585 TSR1Q2NL82 804 aaKnown RBP12.12□□□□□ -0.47
CASP3-202ENST00000393585 SUPT20HL1Q3ZLR7 823 aa12.12□□□□□ -0.47
CASP3-202ENST00000393585 MYCT1Q8N699 235 aa12.12□□□□□ -0.47
CASP3-202ENST00000393585 CEP63Q96MT8 703 aa12.12□□□□□ -0.47
CASP3-202ENST00000393585 SH2D3AQ9BRG2 576 aa12.12□□□□□ -0.47
CASP3-202ENST00000393585 TMOD4Q9NZQ9 345 aa12.12□□□□□ -0.47
CASP3-202ENST00000393585 AFG3L2Q9Y4W6 797 aa12.12□□□□□ -0.47
CASP3-202ENST00000393585 PPP2R3BQ9Y5P8 575 aa12.12□□□□□ -0.47
CASP3-202ENST00000393585 FRMPD4Q14CM0 1322 aa12.12□□□□□ -0.47
CASP3-202ENST00000393585 URI1O94763 535 aaPredicted RBP12.12□□□□□ -0.47
CASP3-202ENST00000393585 FDX1P10109 184 aa12.12□□□□□ -0.47
CASP3-202ENST00000393585 ZBED6P86452 979 aa12.12□□□□□ -0.47
CASP3-202ENST00000393585 VGLL4Q14135 290 aa12.12□□□□□ -0.47
CASP3-202ENST00000393585 PLS1Q14651 629 aa12.12□□□□□ -0.47
CASP3-202ENST00000393585 CATSPERGQ6ZRH7 1159 aa12.12□□□□□ -0.47
CASP3-202ENST00000393585 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.12□□□□□ -0.47
CASP3-202ENST00000393585 KSR1Q8IVT5 923 aa12.12□□□□□ -0.47
CASP3-202ENST00000393585 RETREG2Q8NC44 543 aa12.12□□□□□ -0.47
CASP3-202ENST00000393585 LRRN4CLQ8ND94 238 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms