RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 IRF2BP2Q7Z5L9 587 aa15.29■□□□□ 0.04
CCDC57-203ENST00000392343 YTHDF3Q7Z739 585 aaKnown RBP15.29■□□□□ 0.04
CCDC57-203ENST00000392343 PROM2Q8N271 834 aa15.29■□□□□ 0.04
CCDC57-203ENST00000392343 SEC16BQ96JE7 1060 aa15.29■□□□□ 0.04
CCDC57-203ENST00000392343 TRIM51Q9BSJ1 452 aa15.29■□□□□ 0.04
CCDC57-203ENST00000392343 NUCKS1Q9H1E3 243 aaKnown RBP15.29■□□□□ 0.04
CCDC57-203ENST00000392343 DDX25Q9UHL0 483 aaKnown RBP15.29■□□□□ 0.04
CCDC57-203ENST00000392343 CCDC88AQ3V6T2 1871 aa15.29■□□□□ 0.04
CCDC57-203ENST00000392343 SMIM23A6NLE4 172 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 RASSF9O75901 435 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 BAG3O95817 575 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 SLC16A2P36021 539 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 USP11P51784 963 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 CDR1P51861 262 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 DHX9Q08211 1270 aaKnown RBP15.28■□□□□ 0.04
CCDC57-203ENST00000392343 E2F5Q15329 346 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 TMEM119Q4V9L6 283 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 EMC10Q5UCC4 262 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 SPTY2D1Q68D10 685 aaPredicted RBP15.28■□□□□ 0.04
CCDC57-203ENST00000392343 GPBP1Q86WP2 473 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 RBM46Q8TBY0 533 aaKnown RBP15.28■□□□□ 0.04
CCDC57-203ENST00000392343 SYN2Q92777 582 aaPredicted RBP15.28■□□□□ 0.04
CCDC57-203ENST00000392343 AIPL1Q9NZN9 384 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 AJAP1Q9UKB5 411 aaPredicted RBP15.28■□□□□ 0.04
CCDC57-203ENST00000392343 PCDHA12Q9UN75 941 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 ATP8A1Q9Y2Q0 1164 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 RREB1Q92766 1687 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 TRAPPC3O43617 180 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 NR2F2P24468 414 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 BTDP43251 543 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 SMTNP53814 917 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 PPP2R2AP63151 447 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 PRPF4BQ13523 1007 aaKnown RBP15.28■□□□□ 0.04
CCDC57-203ENST00000392343 PEX26Q7Z412 305 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 DAAM2Q86T65 1068 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 ARFGAP2Q8N6H7 521 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 BMP2KQ9NSY1 1161 aaPredicted RBP15.28■□□□□ 0.04
CCDC57-203ENST00000392343 NAGPAQ9UK23 515 aa15.28■□□□□ 0.04
CCDC57-203ENST00000392343 ATXN2Q99700 1313 aaKnown RBP15.28■□□□□ 0.04
CCDC57-203ENST00000392343 PGRMC1O00264 195 aaKnown RBP15.27■□□□□ 0.04
CCDC57-203ENST00000392343 RAD21O60216 631 aa15.27■□□□□ 0.04
CCDC57-203ENST00000392343 PDIA5Q14554 519 aa15.27■□□□□ 0.04
CCDC57-203ENST00000392343 DDB1Q16531 1140 aa15.27■□□□□ 0.04
CCDC57-203ENST00000392343 TTBK2Q6IQ55 1244 aa15.27■□□□□ 0.04
CCDC57-203ENST00000392343 CPLX4Q7Z7G2 160 aa15.27■□□□□ 0.04
CCDC57-203ENST00000392343 NBPF5PQ86XG9 351 aaPredicted RBP15.27■□□□□ 0.04
CCDC57-203ENST00000392343 LRRC45Q96CN5 670 aa15.27■□□□□ 0.04
CCDC57-203ENST00000392343 PAGR1Q9BTK6 254 aa15.27■□□□□ 0.04
CCDC57-203ENST00000392343 HDAC9Q9UKV0 1011 aa15.27■□□□□ 0.04
CCDC57-203ENST00000392343 MEIS1O00470 390 aa15.27■□□□□ 0.03
CCDC57-203ENST00000392343 CHUKO15111 745 aa15.27■□□□□ 0.03
CCDC57-203ENST00000392343 PLA2G4BP0C869 781 aa15.27■□□□□ 0.03
CCDC57-203ENST00000392343 UCHL3P15374 230 aa15.27■□□□□ 0.03
CCDC57-203ENST00000392343 DDR1Q08345 913 aa15.27■□□□□ 0.03
CCDC57-203ENST00000392343 TEX11Q8IYF3 940 aa15.27■□□□□ 0.03
CCDC57-203ENST00000392343 UHMK1Q8TAS1 419 aaKnown RBP15.27■□□□□ 0.03
CCDC57-203ENST00000392343 GOPCQ9HD26 462 aa15.27■□□□□ 0.03
CCDC57-203ENST00000392343 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.27■□□□□ 0.03
CCDC57-203ENST00000392343 TLDC2A0PJX2 215 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 ECM2O94769 699 aaPredicted RBP15.26■□□□□ 0.03
CCDC57-203ENST00000392343 CCDC172P0C7W6 258 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 IFFO1Q0D2I5 559 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 BYSLQ13895 437 aaKnown RBP15.26■□□□□ 0.03
CCDC57-203ENST00000392343 LRRC57Q8N9N7 239 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 MARCH10Q8NA82 808 aaPredicted RBP15.26■□□□□ 0.03
CCDC57-203ENST00000392343 NEDD1Q8NHV4 660 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 TPCN2Q8NHX9 752 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.26■□□□□ 0.032e-7■■□□□ 14.4
CCDC57-203ENST00000392343 ANKRD2Q9GZV1 360 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 IKZF4Q9H2S9 585 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 KCTD10Q9H3F6 313 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 OSGEPQ9NPF4 335 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 CUL1Q13616 776 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 NFIXQ14938 502 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 LRIG3Q6UXM1 1119 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 LINC00116Q8NCU8 138 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 U2AF1L4Q8WU68 220 aaKnown RBP15.26■□□□□ 0.03
CCDC57-203ENST00000392343 PCDHA2Q9Y5H9 948 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 MYH7BA7E2Y1 1941 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 PPP1R11O60927 126 aaPredicted RBP15.26■□□□□ 0.03
CCDC57-203ENST00000392343 SLURP2P0DP57 97 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 ANKRD20A8PQ5CZ79 823 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 CYB5D1Q6P9G0 228 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 FAM228AQ86W67 206 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 CCDC65Q8IXS2 484 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 FUKQ8N0W3 1084 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 GIMAP7Q8NHV1 300 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 PNMA2Q9UL42 364 aa15.26■□□□□ 0.03
CCDC57-203ENST00000392343 SNED1Q8TER0 1413 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 DOT1LQ8TEK3 1739 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 POTEFA5A3E0 1075 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 CETN3O15182 167 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 SHBGP04278 402 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 POTEIP0CG38 1075 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 ABCB4P21439 1286 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 PICALMQ13492 652 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 POTEGQ6S5H5 508 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 POTEEQ6S8J3 1075 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 RUFY4Q6ZNE9 571 aa15.25■□□□□ 0.03
CCDC57-203ENST00000392343 TMC3Q7Z5M5 1100 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms