RNA–Protein interactions for RNA: ENST00000390457.2

TRAV27-201, Transcript of T cell receptor alpha variable 27, humanhuman

APPRIS P1 BASIC

Gene TRAV27, Length 425 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27-201ENST00000390457 MARCH8Q5T0T0 291 aa8.11□□□□□ -1.11
TRAV27-201ENST00000390457 RUFY4Q6ZNE9 571 aa8.11□□□□□ -1.11
TRAV27-201ENST00000390457 RTN4RL1Q86UN2 441 aaPredicted RBP8.11□□□□□ -1.11
TRAV27-201ENST00000390457 ALYREFQ86V81 257 aaKnown RBP8.11□□□□□ -1.11
TRAV27-201ENST00000390457 HOMER1Q86YM7 354 aa8.11□□□□□ -1.11
TRAV27-201ENST00000390457 ADHFE1Q8IWW8 467 aa8.11□□□□□ -1.11
TRAV27-201ENST00000390457 IGDCC4Q8TDY8 1250 aa8.11□□□□□ -1.11
TRAV27-201ENST00000390457 IL17RAQ96F46 866 aa8.11□□□□□ -1.11
TRAV27-201ENST00000390457 LMAN2LQ9H0V9 348 aa8.11□□□□□ -1.11
TRAV27-201ENST00000390457 KCNH6Q9H252 994 aa8.11□□□□□ -1.11
TRAV27-201ENST00000390457 RWDD1Q9H446 243 aaPredicted RBP8.11□□□□□ -1.11
TRAV27-201ENST00000390457 PCDHB13Q9Y5F0 798 aa8.11□□□□□ -1.11
TRAV27-201ENST00000390457 GVINP1Q7Z2Y8 2422 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 FAM186AA6NE01 2351 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 GSTTP1A0A1W2PQM5 241 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 NOP56O00567 594 aaKnown RBP8.1□□□□□ -1.11
TRAV27-201ENST00000390457 MBTPS2O43462 519 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 NCK2O43639 380 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 ATP9AO75110 1047 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 DGKIO75912 1065 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 GSPT1P15170 499 aaKnown RBP8.1□□□□□ -1.11
TRAV27-201ENST00000390457 KCNA2P16389 499 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 ANTXR2P58335 489 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 NHLH1Q02575 133 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 PTH1RQ03431 593 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 HERC4Q5GLZ8 1057 aaPredicted RBP8.1□□□□□ -1.11
TRAV27-201ENST00000390457 FBXO47Q5MNV8 452 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 PCNX4Q63HM2 1172 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 TAF2Q6P1X5 1199 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 XRRA1Q6P2D8 792 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 USP17L6PQ6QN14 398 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 RASEFQ8IZ41 740 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 FIBCD1Q8N539 461 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 LINC01599Q8WXQ3 324 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 MARVELD3Q96A59 401 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 FBXL18Q96ME1 805 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 MAP3K14Q99558 947 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 CLDND1Q9NY35 253 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 RTEL1Q9NZ71 1219 aa8.1□□□□□ -1.11
TRAV27-201ENST00000390457 ADGRA3Q8IWK6 1321 aa8.09□□□□□ -1.11
TRAV27-201ENST00000390457 IFIT3O14879 490 aaKnown RBP8.09□□□□□ -1.11
TRAV27-201ENST00000390457 TBX10O75333 385 aa8.09□□□□□ -1.11
TRAV27-201ENST00000390457 EYA4O95677 639 aa8.09□□□□□ -1.11
TRAV27-201ENST00000390457 MMP1P03956 469 aa8.09□□□□□ -1.11
TRAV27-201ENST00000390457 GHRP10912 638 aa8.09□□□□□ -1.11
TRAV27-201ENST00000390457 ITGB5P18084 799 aa8.09□□□□□ -1.11
TRAV27-201ENST00000390457 DNAJB1P25685 340 aa8.09□□□□□ -1.11
TRAV27-201ENST00000390457 PDE4AP27815 886 aa8.09□□□□□ -1.11
TRAV27-201ENST00000390457 SMARCA1P28370 1054 aa8.09□□□□□ -1.11
TRAV27-201ENST00000390457 CTNNB1P35222 781 aa8.09□□□□□ -1.11
TRAV27-201ENST00000390457 GTF2F1P35269 517 aaKnown RBP eCLIP8.09□□□□□ -1.11
TRAV27-201ENST00000390457 ARHGAP4P98171 946 aa8.09□□□□□ -1.11
TRAV27-201ENST00000390457 ADAM15Q13444 863 aa8.09□□□□□ -1.11
TRAV27-201ENST00000390457 UTP14CQ5TAP6 766 aaKnown RBP8.09□□□□□ -1.11
TRAV27-201ENST00000390457 HFE2Q6ZVN8 426 aa8.09□□□□□ -1.11
TRAV27-201ENST00000390457 P2RX5Q93086 422 aa8.09□□□□□ -1.11
TRAV27-201ENST00000390457 GPRASP2Q96D09 838 aa8.09□□□□□ -1.11
TRAV27-201ENST00000390457 MSLNLQ96KJ4 702 aa8.09□□□□□ -1.11
TRAV27-201ENST00000390457 PCYT2Q99447 389 aa8.09□□□□□ -1.11
TRAV27-201ENST00000390457 C11orf84Q9BUA3 381 aaPredicted RBP8.09□□□□□ -1.11
TRAV27-201ENST00000390457 PLVAPQ9BX97 442 aa8.09□□□□□ -1.11
TRAV27-201ENST00000390457 SPZ1Q9BXG8 430 aa8.09□□□□□ -1.11
TRAV27-201ENST00000390457 AGO3Q9H9G7 860 aaKnown RBP8.09□□□□□ -1.11
TRAV27-201ENST00000390457 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.09□□□□□ -1.11
TRAV27-201ENST00000390457 ZNF215Q9UL58 517 aaPredicted RBP8.09□□□□□ -1.11
TRAV27-201ENST00000390457 FAM50BQ9Y247 325 aa8.09□□□□□ -1.11
TRAV27-201ENST00000390457 RWDD3Q9Y3V2 267 aa8.09□□□□□ -1.11
TRAV27-201ENST00000390457 ZNF292O60281 2723 aa8.09□□□□□ -1.12
TRAV27-201ENST00000390457 E7EWF7 191 aa8.08□□□□□ -1.12
TRAV27-201ENST00000390457 LINC01565O15544 149 aa8.08□□□□□ -1.12
TRAV27-201ENST00000390457 TCF7P36402 384 aaPredicted RBP8.08□□□□□ -1.12
TRAV27-201ENST00000390457 MRE11P49959 708 aa8.08□□□□□ -1.12
TRAV27-201ENST00000390457 TRDNQ13061 729 aa8.08□□□□□ -1.12
TRAV27-201ENST00000390457 SMAD4Q13485 552 aaKnown RBP8.08□□□□□ -1.12
TRAV27-201ENST00000390457 COL9A3Q14050 684 aaPredicted RBP8.08□□□□□ -1.12
TRAV27-201ENST00000390457 WTAPQ15007 396 aa8.08□□□□□ -1.12
TRAV27-201ENST00000390457 GRIK4Q16099 956 aa8.08□□□□□ -1.12
TRAV27-201ENST00000390457 BMP8AQ7Z5Y6 402 aa8.08□□□□□ -1.12
TRAV27-201ENST00000390457 RNF135Q8IUD6 432 aa8.08□□□□□ -1.12
TRAV27-201ENST00000390457 MB21D2Q8IYB1 491 aaPredicted RBP8.08□□□□□ -1.12
TRAV27-201ENST00000390457 GIMAP8Q8ND71 665 aaPredicted RBP8.08□□□□□ -1.12
TRAV27-201ENST00000390457 SPPL3Q8TCT6 385 aa8.08□□□□□ -1.12
TRAV27-201ENST00000390457 DNAJB3Q8WWF6 145 aa8.08□□□□□ -1.12
TRAV27-201ENST00000390457 SEPT1Q8WYJ6 367 aa8.08□□□□□ -1.12
TRAV27-201ENST00000390457 ALG13Q9NP73 1137 aaKnown RBP8.08□□□□□ -1.12
TRAV27-201ENST00000390457 CLEC1BQ9P126 229 aa8.08□□□□□ -1.12
TRAV27-201ENST00000390457 PLAGL2Q9UPG8 496 aa8.08□□□□□ -1.12
TRAV27-201ENST00000390457 UBIAD1Q9Y5Z9 338 aa8.08□□□□□ -1.12
TRAV27-201ENST00000390457 SQORQ9Y6N5 450 aa8.08□□□□□ -1.12
TRAV27-201ENST00000390457 ITGB1P05556 798 aa8.07□□□□□ -1.12
TRAV27-201ENST00000390457 CHMLP26374 656 aa8.07□□□□□ -1.12
TRAV27-201ENST00000390457 MRPS6P82932 125 aaKnown RBP8.07□□□□□ -1.12
TRAV27-201ENST00000390457 SP4Q02446 784 aa8.07□□□□□ -1.12
TRAV27-201ENST00000390457 PPFIA1Q13136 1202 aa8.07□□□□□ -1.12
TRAV27-201ENST00000390457 CBX2Q14781 532 aaPredicted RBP8.07□□□□□ -1.12
TRAV27-201ENST00000390457 NAALADL2Q58DX5 795 aa8.07□□□□□ -1.12
TRAV27-201ENST00000390457 TTC22Q5TAA0 569 aa8.07□□□□□ -1.12
TRAV27-201ENST00000390457 TSHZ1Q6ZSZ6 1077 aa8.07□□□□□ -1.12
TRAV27-201ENST00000390457 ADGRD2Q7Z7M1 963 aa8.07□□□□□ -1.12
TRAV27-201ENST00000390457 NLRX1Q86UT6 975 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms