RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 MYCBPAPQ8TBZ2 947 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 NBPF3Q9H094 633 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 CSF1RP07333 972 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 TROVE2P10155 538 aaKnown RBP eCLIP14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 KCNQ4P56696 695 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 IL9RQ01113 521 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 SGO2Q562F6 1265 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 WDR44Q5JSH3 913 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 SLFN12Q8IYM2 578 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 LRRC8CQ8TDW0 803 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 SEC16BQ96JE7 1060 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 CEP63Q96MT8 703 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 BARHL2Q9NY43 387 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 ECEL1O95672 775 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 PDE6CP51160 858 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 GTF2IP78347 998 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 MYL7Q01449 175 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 FBXL16Q8N461 479 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 RAD54LQ92698 747 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 PLAGL2Q9UPG8 496 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 ERVV-1B6SEH8 477 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 GAS7O60861 476 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 SYF2O95926 243 aaKnown RBP14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 PSMC2P35998 433 aaKnown RBP14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 PMS2P54278 862 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 ADCY2Q08462 1091 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 TMED2Q15363 201 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 LIN9Q5TKA1 542 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 PHLDB2Q86SQ0 1253 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 NGLY1Q96IV0 654 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 TRIM51Q9BSJ1 452 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 YIPF3Q9GZM5 350 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 PNMA2Q9UL42 364 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 LOC102724428A0A0B4J2F2 783 aa14.24□□□□□ -0.13
TRAPPC9-201ENST00000389328 SIK1P57059 783 aa14.24□□□□□ -0.13
TRAPPC9-201ENST00000389328 SLC18A3Q16572 532 aa14.24□□□□□ -0.13
TRAPPC9-201ENST00000389328 PROM2Q8N271 834 aa14.24□□□□□ -0.13
TRAPPC9-201ENST00000389328 SPDL1Q96EA4 605 aa14.24□□□□□ -0.13
TRAPPC9-201ENST00000389328 SLMAPQ14BN4 828 aa14.24□□□□□ -0.13
TRAPPC9-201ENST00000389328 MDM1Q8TC05 714 aa14.24□□□□□ -0.13
TRAPPC9-201ENST00000389328 GBP5Q96PP8 586 aa14.24□□□□□ -0.13
TRAPPC9-201ENST00000389328 BAZ2BQ9UIF8 2168 aaKnown RBP14.24□□□□□ -0.13
TRAPPC9-201ENST00000389328 TXNDC9O14530 226 aa14.24□□□□□ -0.13
TRAPPC9-201ENST00000389328 BAG2O95816 211 aa14.24□□□□□ -0.13
TRAPPC9-201ENST00000389328 ATF7P17544 494 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC9-201ENST00000389328 CDC37Q16543 378 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC9-201ENST00000389328 KAZNQ674X7 775 aa14.24□□□□□ -0.13
TRAPPC9-201ENST00000389328 PCIF1Q9H4Z3 704 aa14.24□□□□□ -0.13
TRAPPC9-201ENST00000389328 PDE2AO00408 941 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 MYBL2P10244 700 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 ACTN1P12814 892 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 TROAPQ12815 778 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 SCYL3Q8IZE3 742 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 CASKIN2Q8WXE0 1202 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 RUBCNQ92622 972 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 ZNF653Q96CK0 615 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 SSU72P8A0A1W2PR75 194 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 POTEB3A0JP26 581 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 MYMKA6NI61 221 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 POTECB2RU33 542 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 K7ENM7 598 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 GLI1P08151 1106 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 DCUN1D2Q6PH85 259 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 POTEBQ6S5H4 581 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 GLYCTKQ8IVS8 523 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 SH3RF3Q8TEJ3 882 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 CELF4Q9BZC1 486 aaKnown RBP14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 BHMT2Q9H2M3 363 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 UBE2TQ9NPD8 197 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 GEMIN8Q9NWZ8 242 aaKnown RBP14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 DIP2CQ9Y2E4 1556 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 USP17L5A8MUK1 530 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 ARHGEF18Q6ZSZ5 1173 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 CEP128Q6ZU80 1094 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 MAIP1Q8WWC4 291 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 TYW1Q9NV66 732 aaKnown RBP14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 USP40Q9NVE5 1235 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 ZNF148Q9UQR1 794 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 THRAP3Q9Y2W1 955 aaKnown RBP14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 TRIM37O94972 964 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 CDK8P49336 464 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 RBBP5Q15291 538 aaKnown RBP14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 TTI2Q6NXR4 508 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 PDXDC2PQ6P474 469 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 KIRREL3Q8IZU9 778 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 ERGIC2Q96RQ1 377 aa14.23□□□□□ -0.13
TRAPPC9-201ENST00000389328 ADAMTS13Q76LX8 1427 aa14.22□□□□□ -0.13
TRAPPC9-201ENST00000389328 CNTNAP5Q8WYK1 1306 aa14.22□□□□□ -0.13
TRAPPC9-201ENST00000389328 SMTNP53814 917 aa14.22□□□□□ -0.13
TRAPPC9-201ENST00000389328 RASIP1Q5U651 963 aa14.22□□□□□ -0.13
TRAPPC9-201ENST00000389328 ARHGAP20Q9P2F6 1191 aa14.22□□□□□ -0.13
TRAPPC9-201ENST00000389328 DNAJC12Q9UKB3 198 aa14.22□□□□□ -0.13
TRAPPC9-201ENST00000389328 AARSP49588 968 aaKnown RBP eCLIP14.22□□□□□ -0.133e-6■■■■■ 61.8
TRAPPC9-201ENST00000389328 CASP7P55210 303 aa14.22□□□□□ -0.13
TRAPPC9-201ENST00000389328 UBXN2AP68543 259 aa14.22□□□□□ -0.13
TRAPPC9-201ENST00000389328 KDM7AQ6ZMT4 941 aa14.22□□□□□ -0.13
TRAPPC9-201ENST00000389328 SFR1Q86XK3 245 aa14.22□□□□□ -0.13
TRAPPC9-201ENST00000389328 GRK7Q8WTQ7 553 aa14.22□□□□□ -0.13
TRAPPC9-201ENST00000389328 ANAPC5Q9UJX4 755 aa14.22□□□□□ -0.13
TRAPPC9-201ENST00000389328 OVOS2A0A0G2JMS6 1433 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms