RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 ZNF414Q96IQ9 312 aa0.65□□□□□ -2.31
RNU6-540P-201ENST00000384622 CCDC87Q9NVE4 849 aa0.65□□□□□ -2.31
RNU6-540P-201ENST00000384622 ELOVL5Q9NYP7 299 aa0.65□□□□□ -2.31
RNU6-540P-201ENST00000384622 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP0.65□□□□□ -2.31
RNU6-540P-201ENST00000384622 ASH2LQ9UBL3 628 aa0.65□□□□□ -2.31
RNU6-540P-201ENST00000384622 FBXL21Q9UKT6 434 aa0.65□□□□□ -2.31
RNU6-540P-201ENST00000384622 NOVA2Q9UNW9 492 aaKnown RBP0.65□□□□□ -2.31
RNU6-540P-201ENST00000384622 BTBD3Q9Y2F9 522 aa0.65□□□□□ -2.31
RNU6-540P-201ENST00000384622 IFITM10A6NMD0 228 aa0.64□□□□□ -2.31
RNU6-540P-201ENST00000384622 CHURC1-FNTBB4DL54 471 aa0.64□□□□□ -2.31
RNU6-540P-201ENST00000384622 GTPBP1O00178 669 aaKnown RBP0.64□□□□□ -2.31
RNU6-540P-201ENST00000384622 LINC01565O15544 149 aa0.64□□□□□ -2.31
RNU6-540P-201ENST00000384622 KELP23276 732 aa0.64□□□□□ -2.31
RNU6-540P-201ENST00000384622 CYB5RLQ6IPT4 315 aa0.64□□□□□ -2.31
RNU6-540P-201ENST00000384622 IL27Q8NEV9 243 aa0.64□□□□□ -2.31
RNU6-540P-201ENST00000384622 DPF1Q92782 380 aa0.64□□□□□ -2.31
RNU6-540P-201ENST00000384622 WBP2Q969T9 261 aa0.64□□□□□ -2.31
RNU6-540P-201ENST00000384622 LYZL4Q96KX0 146 aa0.64□□□□□ -2.31
RNU6-540P-201ENST00000384622 DSCC1Q9BVC3 393 aa0.64□□□□□ -2.31
RNU6-540P-201ENST00000384622 BCO2Q9BYV7 579 aa0.64□□□□□ -2.31
RNU6-540P-201ENST00000384622 SLCO5A1Q9H2Y9 848 aa0.64□□□□□ -2.31
RNU6-540P-201ENST00000384622 GP6Q9HCN6 339 aa0.64□□□□□ -2.31
RNU6-540P-201ENST00000384622 NLRP2Q9NX02 1062 aa0.64□□□□□ -2.31
RNU6-540P-201ENST00000384622 DTLQ9NZJ0 730 aa0.64□□□□□ -2.31
RNU6-540P-201ENST00000384622 KLHL3Q9UH77 587 aa0.64□□□□□ -2.31
RNU6-540P-201ENST00000384622 WASF3Q9UPY6 502 aa0.64□□□□□ -2.31
RNU6-540P-201ENST00000384622 COG6Q9Y2V7 657 aa0.64□□□□□ -2.31
RNU6-540P-201ENST00000384622 POLR2AP24928 1970 aaKnown RBP0.63□□□□□ -2.31
RNU6-540P-201ENST00000384622 MANSC4A6NHS7 340 aaPredicted RBP0.63□□□□□ -2.31
RNU6-540P-201ENST00000384622 BRINP1O60477 761 aa0.63□□□□□ -2.31
RNU6-540P-201ENST00000384622 ESRRBO95718 433 aa0.63□□□□□ -2.31
RNU6-540P-201ENST00000384622 PLCD1P51178 756 aa0.63□□□□□ -2.31
RNU6-540P-201ENST00000384622 SMAD3P84022 425 aaKnown RBP0.63□□□□□ -2.31
RNU6-540P-201ENST00000384622 TBR1Q16650 682 aa0.63□□□□□ -2.31
RNU6-540P-201ENST00000384622 KRTAP24-1Q3LI83 254 aa0.63□□□□□ -2.31
RNU6-540P-201ENST00000384622 TMEM201Q5SNT2 666 aa0.63□□□□□ -2.31
RNU6-540P-201ENST00000384622 ZNF843Q8N446 348 aa0.63□□□□□ -2.31
RNU6-540P-201ENST00000384622 SHCBP1Q8NEM2 672 aa0.63□□□□□ -2.31
RNU6-540P-201ENST00000384622 CPT1CQ8TCG5 803 aa0.63□□□□□ -2.31
RNU6-540P-201ENST00000384622 PGBD4Q96DM1 585 aa0.63□□□□□ -2.31
RNU6-540P-201ENST00000384622 SCYL1Q96KG9 808 aa0.63□□□□□ -2.31
RNU6-540P-201ENST00000384622 SRRTQ9BXP5 876 aaKnown RBP0.63□□□□□ -2.31
RNU6-540P-201ENST00000384622 KLK15Q9H2R5 256 aa0.63□□□□□ -2.31
RNU6-540P-201ENST00000384622 HIPK2Q9H2X6 1198 aa0.63□□□□□ -2.31
RNU6-540P-201ENST00000384622 NRIP3Q9NQ35 241 aa0.63□□□□□ -2.31
RNU6-540P-201ENST00000384622 PCDHB12Q9Y5F1 795 aa0.63□□□□□ -2.31
RNU6-540P-201ENST00000384622 COL2A1P02458 1487 aaPredicted RBP0.62□□□□□ -2.31
RNU6-540P-201ENST00000384622 GOLGA6L6A8MZA4 724 aa0.62□□□□□ -2.31
RNU6-540P-201ENST00000384622 CUTAO60888 179 aa0.62□□□□□ -2.31
RNU6-540P-201ENST00000384622 ALPLP05186 524 aa0.62□□□□□ -2.31
RNU6-540P-201ENST00000384622 ITPKBP27987 946 aa0.62□□□□□ -2.31
RNU6-540P-201ENST00000384622 POLD1P28340 1107 aa0.62□□□□□ -2.31
RNU6-540P-201ENST00000384622 LMOD1P29536 600 aaPredicted RBP0.62□□□□□ -2.31
RNU6-540P-201ENST00000384622 CACNA2D1P54289 1103 aa0.62□□□□□ -2.31
RNU6-540P-201ENST00000384622 NANOS2P60321 138 aaKnown RBP0.62□□□□□ -2.31
RNU6-540P-201ENST00000384622 SEPT6Q14141 434 aa0.62□□□□□ -2.31
RNU6-540P-201ENST00000384622 BMT2Q1RMZ1 405 aa0.62□□□□□ -2.31
RNU6-540P-201ENST00000384622 NAALADL2Q58DX5 795 aa0.62□□□□□ -2.31
RNU6-540P-201ENST00000384622 USP30Q70CQ3 517 aa0.62□□□□□ -2.31
RNU6-540P-201ENST00000384622 STPG3Q8N7X2 389 aa0.62□□□□□ -2.31
RNU6-540P-201ENST00000384622 MYEOVQ96EZ4 313 aa0.62□□□□□ -2.31
RNU6-540P-201ENST00000384622 FCRL3Q96P31 734 aaPredicted RBP0.62□□□□□ -2.31
RNU6-540P-201ENST00000384622 FAM193BQ96PV7 902 aaPredicted RBP0.62□□□□□ -2.31
RNU6-540P-201ENST00000384622 MNTQ99583 582 aa0.62□□□□□ -2.31
RNU6-540P-201ENST00000384622 SMAD5-AS1Q9Y6J3 95 aa0.62□□□□□ -2.31
RNU6-540P-201ENST00000384622 KLRG2A4D1S0 409 aaPredicted RBP0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 EIF1AYO14602 144 aaKnown RBP0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 RGS13O14921 159 aa0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 SOCS5O75159 536 aa0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 RECQL4O94761 1208 aa0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 FAM13AO94988 1023 aa0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 PLGP00747 810 aaPredicted RBP0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 LRG1P02750 347 aa0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 SERPINB2P05120 415 aa0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 PRKCGP05129 697 aa0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 GLRBP48167 497 aa0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 RARRES1P49788 294 aa0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 SIM1P81133 766 aaPredicted RBP0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 MPP3Q13368 585 aa0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 MORN5Q5VZ52 161 aa0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 VASNQ6EMK4 673 aa0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 NXPE4Q6UWF7 544 aa0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 ARHGEF19Q8IW93 802 aa0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 C3orf58Q8NDZ4 430 aa0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 WFIKKN2Q8TEU8 576 aa0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 HASPINQ8TF76 798 aa0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 AGO3Q9H9G7 860 aaKnown RBP0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 TMEM260Q9NX78 707 aa0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 FLRT1Q9NZU1 646 aa0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 ZFP69BQ9UJL9 534 aa0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 SORCS3Q9UPU3 1222 aa0.61□□□□□ -2.31
RNU6-540P-201ENST00000384622 TP53BP1Q12888 1972 aaPredicted RBP0.6□□□□□ -2.31
RNU6-540P-201ENST00000384622 ADAM10O14672 748 aa0.6□□□□□ -2.31
RNU6-540P-201ENST00000384622 SLC26A4O43511 780 aa0.6□□□□□ -2.31
RNU6-540P-201ENST00000384622 UBOX5O94941 541 aa0.6□□□□□ -2.31
RNU6-540P-201ENST00000384622 BAG4O95429 457 aaKnown RBP0.6□□□□□ -2.31
RNU6-540P-201ENST00000384622 MPLP40238 635 aa0.6□□□□□ -2.31
RNU6-540P-201ENST00000384622 RAD51AP2Q09MP3 1159 aa0.6□□□□□ -2.31
RNU6-540P-201ENST00000384622 MTMR3Q13615 1198 aa0.6□□□□□ -2.31
RNU6-540P-201ENST00000384622 ELAVL1Q15717 326 aaKnown RBP0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms