RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 NEK4P51957 841 aa4.47□□□□□ -1.69
SMC6-202ENST00000381272 SRSF3P84103 164 aaKnown RBP4.47□□□□□ -1.69
SMC6-202ENST00000381272 ATP8B2P98198 1209 aa4.47□□□□□ -1.69
SMC6-202ENST00000381272 TMEM62Q0P6H9 643 aa4.47□□□□□ -1.69
SMC6-202ENST00000381272 TAF7Q15545 349 aaPredicted RBP4.47□□□□□ -1.69
SMC6-202ENST00000381272 CCDC30Q5VVM6 783 aa4.47□□□□□ -1.69
SMC6-202ENST00000381272 EEF1DP3Q658K8 133 aa4.47□□□□□ -1.69
SMC6-202ENST00000381272 RCSD1Q6JBY9 416 aa4.47□□□□□ -1.69
SMC6-202ENST00000381272 NOL8Q76FK4 1167 aaKnown RBP4.47□□□□□ -1.69
SMC6-202ENST00000381272 ARHGEF39Q8N4T4 335 aa4.47□□□□□ -1.69
SMC6-202ENST00000381272 PTCHD1Q96NR3 888 aa4.47□□□□□ -1.69
SMC6-202ENST00000381272 LRRCC1Q9C099 1032 aa4.47□□□□□ -1.69
SMC6-202ENST00000381272 IL1RAPL2Q9NP60 686 aa4.47□□□□□ -1.69
SMC6-202ENST00000381272 LMBRD1Q9NUN5 540 aa4.47□□□□□ -1.69
SMC6-202ENST00000381272 SIRT5Q9NXA8 310 aa4.47□□□□□ -1.69
SMC6-202ENST00000381272 CGGBP1Q9UFW8 167 aaPredicted RBP4.47□□□□□ -1.69
SMC6-202ENST00000381272 PALD1Q9ULE6 856 aa4.47□□□□□ -1.69
SMC6-202ENST00000381272 ZDHHC9Q9Y397 364 aa4.47□□□□□ -1.69
SMC6-202ENST00000381272 TBX22Q9Y458 520 aa4.47□□□□□ -1.69
SMC6-202ENST00000381272 TUBGCP6Q96RT7 1819 aa4.47□□□□□ -1.69
SMC6-202ENST00000381272 KDRP35968 1356 aa4.47□□□□□ -1.69
SMC6-202ENST00000381272 MARF1Q9Y4F3 1742 aaKnown RBP4.47□□□□□ -1.69
SMC6-202ENST00000381272 HTATSF1O43719 755 aaKnown RBP4.46□□□□□ -1.69
SMC6-202ENST00000381272 GNAI3P08754 354 aa4.46□□□□□ -1.69
SMC6-202ENST00000381272 NAT2P11245 290 aa4.46□□□□□ -1.69
SMC6-202ENST00000381272 KCNA6P17658 529 aa4.46□□□□□ -1.69
SMC6-202ENST00000381272 EIF2S2P20042 333 aaKnown RBP4.46□□□□□ -1.69
SMC6-202ENST00000381272 MX1P20591 662 aa4.46□□□□□ -1.69
SMC6-202ENST00000381272 YBX1P67809 324 aaKnown RBP4.46□□□□□ -1.69
SMC6-202ENST00000381272 NUCB2P80303 420 aa4.46□□□□□ -1.69
SMC6-202ENST00000381272 AMPD2Q01433 879 aa4.46□□□□□ -1.69
SMC6-202ENST00000381272 GRB10Q13322 594 aa4.46□□□□□ -1.69
SMC6-202ENST00000381272 NCAPHQ15003 741 aa4.46□□□□□ -1.69
SMC6-202ENST00000381272 TNNI3KQ59H18 835 aa4.46□□□□□ -1.69
SMC6-202ENST00000381272 CIAPIN1Q6FI81 312 aa4.46□□□□□ -1.69
SMC6-202ENST00000381272 CAVIN1Q6NZI2 390 aaKnown RBP4.46□□□□□ -1.69
SMC6-202ENST00000381272 CLEC17AQ6ZS10 378 aa4.46□□□□□ -1.69
SMC6-202ENST00000381272 UNC5CLQ8IV45 518 aa4.46□□□□□ -1.69
SMC6-202ENST00000381272 USP44Q9H0E7 712 aa4.46□□□□□ -1.69
SMC6-202ENST00000381272 SUSD2Q9UGT4 822 aa4.46□□□□□ -1.69
SMC6-202ENST00000381272 MRVI1Q9Y6F6 885 aa4.46□□□□□ -1.69
SMC6-202ENST00000381272 SALL3Q9BXA9 1300 aa4.46□□□□□ -1.69
SMC6-202ENST00000381272 A0A1W2PQJ5 194 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 AURKAO14965 403 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 KCNQ3O43525 872 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 ANXA1P04083 346 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 UBTFL1P0CB47 393 aaPredicted RBP4.46□□□□□ -1.7
SMC6-202ENST00000381272 CHMLP26374 656 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 L1CAMP32004 1257 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 VIPR1P32241 457 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 SEPHS1P49903 392 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 ZNF143P52747 638 aaPredicted RBP4.46□□□□□ -1.7
SMC6-202ENST00000381272 LINC00310P59036 64 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 MVKQ03426 396 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 DPY19L1Q2PZI1 675 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 KLHL40Q2TBA0 621 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 CRACR2BQ8N4Y2 399 aaPredicted RBP4.46□□□□□ -1.7
SMC6-202ENST00000381272 TMX3Q96JJ7 454 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 NAP1L5Q96NT1 182 aaPredicted RBP4.46□□□□□ -1.7
SMC6-202ENST00000381272 APBA2Q99767 749 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.46□□□□□ -1.78e-7■□□□□ 11
SMC6-202ENST00000381272 SGPP1Q9BX95 441 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 TNFRSF12AQ9NP84 129 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 ISY1Q9ULR0 285 aaKnown RBP4.46□□□□□ -1.7
SMC6-202ENST00000381272 MAP3K5Q99683 1374 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 NWD1Q149M9 1564 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 LRRC37A3O60309 1634 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 LTN1O94822 1766 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 RGPD2P0DJD1 1756 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 CACNA1FO60840 1977 aa4.46□□□□□ -1.7
SMC6-202ENST00000381272 IBTKQ9P2D0 1353 aaPredicted RBP4.45□□□□□ -1.7
SMC6-202ENST00000381272 C2orf71A6NGG8 1288 aa4.45□□□□□ -1.7
SMC6-202ENST00000381272 NUDT19A8MXV4 375 aa4.45□□□□□ -1.7
SMC6-202ENST00000381272 STXBP3O00186 592 aa4.45□□□□□ -1.7
SMC6-202ENST00000381272 SMAD7O15105 426 aaKnown RBP4.45□□□□□ -1.7
SMC6-202ENST00000381272 SURF6O75683 361 aaKnown RBP4.45□□□□□ -1.7
SMC6-202ENST00000381272 CORO7P57737 925 aa4.45□□□□□ -1.7
SMC6-202ENST00000381272 ZSCAN23Q3MJ62 389 aa4.45□□□□□ -1.7
SMC6-202ENST00000381272 NBPF6Q5VWK0 638 aa4.45□□□□□ -1.7
SMC6-202ENST00000381272 POMZP3Q6PJE2 187 aa4.45□□□□□ -1.7
SMC6-202ENST00000381272 PPP1R42Q7Z4L9 355 aa4.45□□□□□ -1.7
SMC6-202ENST00000381272 THEMISQ8N1K5 641 aaPredicted RBP4.45□□□□□ -1.7
SMC6-202ENST00000381272 GPT2Q8TD30 523 aa4.45□□□□□ -1.7
SMC6-202ENST00000381272 TRIM44Q96DX7 344 aaPredicted RBP4.45□□□□□ -1.7
SMC6-202ENST00000381272 NBPF4Q96M43 638 aa4.45□□□□□ -1.7
SMC6-202ENST00000381272 MCMBPQ9BTE3 642 aa4.45□□□□□ -1.7
SMC6-202ENST00000381272 IL25Q9H293 177 aa4.45□□□□□ -1.7
SMC6-202ENST00000381272 GCM1Q9NP62 436 aa4.45□□□□□ -1.7
SMC6-202ENST00000381272 PDLIM7Q9NR12 457 aa4.45□□□□□ -1.7
SMC6-202ENST00000381272 ACTR10Q9NZ32 417 aa4.45□□□□□ -1.7
SMC6-202ENST00000381272 KLHL14Q9P2G3 628 aa4.45□□□□□ -1.7
SMC6-202ENST00000381272 MBD1Q9UIS9 605 aaPredicted RBP4.45□□□□□ -1.7
SMC6-202ENST00000381272 AKT3Q9Y243 479 aa4.45□□□□□ -1.7
SMC6-202ENST00000381272 BACE2Q9Y5Z0 518 aa4.45□□□□□ -1.7
SMC6-202ENST00000381272 FER1L4A9Z1Z3 1794 aa4.45□□□□□ -1.7
SMC6-202ENST00000381272 SLIT1O75093 1534 aa4.45□□□□□ -1.7
SMC6-202ENST00000381272 ARHGAP23Q9P227 1491 aa4.44□□□□□ -1.7
SMC6-202ENST00000381272 NUAK1O60285 661 aa4.44□□□□□ -1.7
SMC6-202ENST00000381272 NBPF7P0C2Y1 421 aaPredicted RBP4.44□□□□□ -1.7
SMC6-202ENST00000381272 MSL3P1P0C860 447 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms