RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 TRMT1LQ7Z2T5 733 aaKnown RBP18.98■□□□□ 0.63
PDX1-201ENST00000381033 ZNF513Q8N8E2 541 aaPredicted RBP18.98■□□□□ 0.63
PDX1-201ENST00000381033 WNK4Q96J92 1243 aa18.98■□□□□ 0.63
PDX1-201ENST00000381033 CCPG1Q9ULG6 757 aa18.98■□□□□ 0.63
PDX1-201ENST00000381033 KIF13BQ9NQT8 1826 aa18.98■□□□□ 0.63
PDX1-201ENST00000381033 ZNF263O14978 683 aa18.98■□□□□ 0.63
PDX1-201ENST00000381033 PSMD10O75832 226 aa18.98■□□□□ 0.63
PDX1-201ENST00000381033 TGFB2P61812 414 aa18.98■□□□□ 0.63
PDX1-201ENST00000381033 FKBP3Q00688 224 aaKnown RBP18.98■□□□□ 0.63
PDX1-201ENST00000381033 KSR1Q8IVT5 923 aa18.98■□□□□ 0.63
PDX1-201ENST00000381033 HSD17B14Q9BPX1 270 aa18.98■□□□□ 0.63
PDX1-201ENST00000381033 RAVER2Q9HCJ3 691 aaKnown RBP18.98■□□□□ 0.63
PDX1-201ENST00000381033 FER1L6Q2WGJ9 1857 aa18.97■□□□□ 0.63
PDX1-201ENST00000381033 FRMD3A2A2Y4 597 aa18.97■□□□□ 0.63
PDX1-201ENST00000381033 ENC1O14682 589 aa18.97■□□□□ 0.63
PDX1-201ENST00000381033 PTGER2P43116 358 aa18.97■□□□□ 0.63
PDX1-201ENST00000381033 GTF2A1P52655 376 aaPredicted RBP18.97■□□□□ 0.63
PDX1-201ENST00000381033 ZBED6P86452 979 aa18.97■□□□□ 0.63
PDX1-201ENST00000381033 MAP3K10Q02779 954 aa18.97■□□□□ 0.63
PDX1-201ENST00000381033 PPP2R3AQ06190 1150 aa18.97■□□□□ 0.63
PDX1-201ENST00000381033 MEA1Q16626 185 aa18.97■□□□□ 0.63
PDX1-201ENST00000381033 CCDC40Q4G0X9 1142 aa18.97■□□□□ 0.63
PDX1-201ENST00000381033 ERMNQ8TAM6 284 aa18.97■□□□□ 0.63
PDX1-201ENST00000381033 HOOK2Q96ED9 719 aa18.97■□□□□ 0.63
PDX1-201ENST00000381033 TSG101Q99816 390 aa18.97■□□□□ 0.63
PDX1-201ENST00000381033 PUF60Q9UHX1 559 aaKnown RBP18.97■□□□□ 0.63
PDX1-201ENST00000381033 SYNPO2Q9UMS6 1093 aa18.97■□□□□ 0.63
PDX1-201ENST00000381033 COL4A3BPQ9Y5P4 624 aa18.97■□□□□ 0.63
PDX1-201ENST00000381033 TSR1Q2NL82 804 aaKnown RBP18.97■□□□□ 0.63
PDX1-201ENST00000381033 CEP55Q53EZ4 464 aa18.97■□□□□ 0.63
PDX1-201ENST00000381033 MUM1L1Q5H9M0 696 aa18.97■□□□□ 0.63
PDX1-201ENST00000381033 BORCS6Q96GS4 357 aa18.97■□□□□ 0.63
PDX1-201ENST00000381033 SH2D3AQ9BRG2 576 aa18.97■□□□□ 0.63
PDX1-201ENST00000381033 NLRC4Q9NPP4 1024 aa18.97■□□□□ 0.63
PDX1-201ENST00000381033 HACL1Q9UJ83 578 aa18.97■□□□□ 0.63
PDX1-201ENST00000381033 ITGB5P18084 799 aa18.96■□□□□ 0.63
PDX1-201ENST00000381033 UBXN4Q92575 508 aa18.96■□□□□ 0.63
PDX1-201ENST00000381033 ZNF446Q9NWS9 450 aa18.96■□□□□ 0.63
PDX1-201ENST00000381033 ARHGAP20Q9P2F6 1191 aa18.96■□□□□ 0.63
PDX1-201ENST00000381033 FEM1BQ9UK73 627 aa18.96■□□□□ 0.63
PDX1-201ENST00000381033 MRPL11Q9Y3B7 192 aaKnown RBP18.96■□□□□ 0.63
PDX1-201ENST00000381033 RABGAP1Q9Y3P9 1069 aa18.96■□□□□ 0.63
PDX1-201ENST00000381033 LRRC53A6NM62 1247 aa18.96■□□□□ 0.63
PDX1-201ENST00000381033 ALAS1P13196 640 aa18.96■□□□□ 0.63
PDX1-201ENST00000381033 ADAM9Q13443 819 aa18.96■□□□□ 0.63
PDX1-201ENST00000381033 MTMR2Q13614 643 aa18.96■□□□□ 0.63
PDX1-201ENST00000381033 R3HDM1Q15032 1099 aaKnown RBP18.96■□□□□ 0.63
PDX1-201ENST00000381033 RRAGAQ7L523 313 aa18.96■□□□□ 0.63
PDX1-201ENST00000381033 ZKSCAN4Q969J2 545 aaPredicted RBP18.96■□□□□ 0.63
PDX1-201ENST00000381033 WDR11Q9BZH6 1224 aa18.96■□□□□ 0.63
PDX1-201ENST00000381033 DEFB129Q9H1M3 183 aa18.96■□□□□ 0.63
PDX1-201ENST00000381033 UNC45AQ9H3U1 944 aa18.96■□□□□ 0.63
PDX1-201ENST00000381033 HDAC6Q9UBN7 1215 aa18.96■□□□□ 0.63
PDX1-201ENST00000381033 CNOT7Q9UIV1 285 aaKnown RBP18.96■□□□□ 0.63
PDX1-201ENST00000381033 RINT1Q6NUQ1 792 aa18.95■□□□□ 0.62
PDX1-201ENST00000381033 ZNF577Q9BSK1 485 aa18.95■□□□□ 0.62
PDX1-201ENST00000381033 GAS7O60861 476 aa18.95■□□□□ 0.62
PDX1-201ENST00000381033 TNNT3P45378 269 aaPredicted RBP18.95■□□□□ 0.62
PDX1-201ENST00000381033 ZC2HC1CQ53FD0 456 aaPredicted RBP18.95■□□□□ 0.62
PDX1-201ENST00000381033 TEX35Q5T0J7 233 aa18.95■□□□□ 0.62
PDX1-201ENST00000381033 DLK2Q6UY11 383 aa18.95■□□□□ 0.62
PDX1-201ENST00000381033 CLEC4DQ8WXI8 215 aa18.95■□□□□ 0.62
PDX1-201ENST00000381033 NUP58Q9BVL2 599 aa18.95■□□□□ 0.62
PDX1-201ENST00000381033 VPS33BQ9H267 617 aa18.95■□□□□ 0.62
PDX1-201ENST00000381033 CLIC2O15247 247 aa18.94■□□□□ 0.62
PDX1-201ENST00000381033 NR2F2P24468 414 aa18.94■□□□□ 0.62
PDX1-201ENST00000381033 ZKSCAN8Q15776 578 aaPredicted RBP18.94■□□□□ 0.62
PDX1-201ENST00000381033 MCTP2Q6DN12 878 aa18.94■□□□□ 0.62
PDX1-201ENST00000381033 FAM160B2Q86V87 743 aa18.94■□□□□ 0.62
PDX1-201ENST00000381033 SLC5A5Q92911 643 aa18.94■□□□□ 0.62
PDX1-201ENST00000381033 ATAD5Q96QE3 1844 aa18.94■□□□□ 0.62
PDX1-201ENST00000381033 NMT1P30419 496 aaKnown RBP18.94■□□□□ 0.62
PDX1-201ENST00000381033 ZNF280AP59817 542 aaPredicted RBP18.94■□□□□ 0.62
PDX1-201ENST00000381033 CCDC122Q5T0U0 273 aa18.94■□□□□ 0.62
PDX1-201ENST00000381033 RETREG2Q8NC44 543 aa18.94■□□□□ 0.62
PDX1-201ENST00000381033 ZNF397Q8NF99 534 aaPredicted RBP18.94■□□□□ 0.62
PDX1-201ENST00000381033 PITPNM2Q9BZ72 1349 aa18.94■□□□□ 0.62
PDX1-201ENST00000381033 FLOT1O75955 427 aa18.93■□□□□ 0.62
PDX1-201ENST00000381033 NOL4O94818 638 aa18.93■□□□□ 0.62
PDX1-201ENST00000381033 GCNT3O95395 438 aa18.93■□□□□ 0.62
PDX1-201ENST00000381033 ICAM1P05362 532 aa18.93■□□□□ 0.62
PDX1-201ENST00000381033 CASP4P49662 377 aa18.93■□□□□ 0.62
PDX1-201ENST00000381033 SPP2Q13103 211 aa18.93■□□□□ 0.62
PDX1-201ENST00000381033 TNIP1Q15025 636 aa18.93■□□□□ 0.62
PDX1-201ENST00000381033 MAEAQ7L5Y9 396 aa18.93■□□□□ 0.62
PDX1-201ENST00000381033 BAP1Q92560 729 aa18.93■□□□□ 0.62
PDX1-201ENST00000381033 POLR3CQ9BUI4 534 aaPredicted RBP18.93■□□□□ 0.62
PDX1-201ENST00000381033 SH2D4AQ9H788 454 aa18.93■□□□□ 0.62
PDX1-201ENST00000381033 PLAGL2Q9UPG8 496 aa18.93■□□□□ 0.62
PDX1-201ENST00000381033 IPO5O00410 1097 aaKnown RBP18.93■□□□□ 0.62
PDX1-201ENST00000381033 FGFR1OPO95684 399 aaKnown RBP18.93■□□□□ 0.62
PDX1-201ENST00000381033 CLCN6P51797 869 aa18.93■□□□□ 0.62
PDX1-201ENST00000381033 PRPF38AQ8NAV1 312 aaKnown RBP18.93■□□□□ 0.62
PDX1-201ENST00000381033 ZNHIT6Q9NWK9 470 aaKnown RBP18.93■□□□□ 0.62
PDX1-201ENST00000381033 SRGAP2O75044 1071 aa18.92■□□□□ 0.62
PDX1-201ENST00000381033 EYA4O95677 639 aa18.92■□□□□ 0.62
PDX1-201ENST00000381033 VCAM1P19320 739 aa18.92■□□□□ 0.62
PDX1-201ENST00000381033 TRIM59Q8IWR1 403 aa18.92■□□□□ 0.62
PDX1-201ENST00000381033 NLGN2Q8NFZ4 835 aa18.92■□□□□ 0.62
PDX1-201ENST00000381033 ZNF541Q9H0D2 1346 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms