RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 CASQ1P31415 396 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 SPAG1Q07617 926 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 UNC13DQ70J99 1090 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 MYOCDQ8IZQ8 938 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 MB21D1Q8N884 522 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 WDR11Q9BZH6 1224 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 ABHD10Q9NUJ1 306 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 GGA3Q9NZ52 723 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 PAXBP1Q9Y5B6 917 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 DLEC1Q9Y238 1755 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 LTBP1Q14766 1721 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 NRXN2Q9P2S2 1712 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 PPP1R12AO14974 1030 aaPredicted RBP11.92□□□□□ -0.5
NEDD9-201ENST00000379433 FANCGO15287 622 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 KIF1CO43896 1103 aaKnown RBP11.92□□□□□ -0.5
NEDD9-201ENST00000379433 ETF1P62495 437 aaKnown RBP11.92□□□□□ -0.5
NEDD9-201ENST00000379433 FKBP1AP62942 108 aaKnown RBP11.92□□□□□ -0.5
NEDD9-201ENST00000379433 ERVK-24P63145 666 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 TBX2Q13207 712 aaPredicted RBP11.92□□□□□ -0.5
NEDD9-201ENST00000379433 PTPROQ16827 1216 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 MUM1L1Q5H9M0 696 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 SFR1Q86XK3 245 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 REXO1L1PQ8IX06 675 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 AGBL3Q8NEM8 1001 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 MTMR8Q96EF0 704 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 PSMB7Q99436 277 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 MTFR1LQ9H019 292 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 LRRC37AA6NMS7 1700 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 BICDL2A1A5D9 508 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 MACROD2A1Z1Q3 448 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 STX10O60499 249 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 PDIA5Q14554 519 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 ZC2HC1CQ53FD0 456 aaPredicted RBP11.92□□□□□ -0.5
NEDD9-201ENST00000379433 FKBP15Q5T1M5 1219 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 PPP1R18Q6NYC8 613 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 MAMSTRQ6ZN01 415 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 KRT26Q7Z3Y9 468 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 CNGA4Q8IV77 575 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 MYCT1Q8N699 235 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 CCDC43Q96MW1 224 aaKnown RBP11.92□□□□□ -0.5
NEDD9-201ENST00000379433 EIF2AK1Q9BQI3 630 aaKnown RBP11.92□□□□□ -0.5
NEDD9-201ENST00000379433 REEP2Q9BRK0 252 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 RPAP3Q9H6T3 665 aaPredicted RBP11.92□□□□□ -0.5
NEDD9-201ENST00000379433 PCDHB13Q9Y5F0 798 aa11.92□□□□□ -0.5
NEDD9-201ENST00000379433 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.92□□□□□ -0.5
NEDD9-201ENST00000379433 EPHB6O15197 1021 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 KCNB1Q14721 858 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 TEX35Q5T0J7 233 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 DNAAF5Q86Y56 855 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 PDCL2Q8N4E4 241 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 ERMNQ8TAM6 284 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 PMM1Q92871 262 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 RUSC1Q9BVN2 902 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 DEF6Q9H4E7 631 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 TBCAO75347 108 aaKnown RBP11.91□□□□□ -0.5
NEDD9-201ENST00000379433 DDNO94850 711 aaPredicted RBP11.91□□□□□ -0.5
NEDD9-201ENST00000379433 MYBP10242 640 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 GCFC2P16383 781 aaKnown RBP11.91□□□□□ -0.5
NEDD9-201ENST00000379433 CYP11B2P19099 503 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 USP11P51784 963 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 TTLL12Q14166 644 aaPredicted RBP11.91□□□□□ -0.5
NEDD9-201ENST00000379433 TDRD12Q587J7 1177 aaKnown RBP11.91□□□□□ -0.5
NEDD9-201ENST00000379433 HAUS3Q68CZ6 603 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 RRAGAQ7L523 313 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 CACNA2D4Q7Z3S7 1137 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 CCDC65Q8IXS2 484 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 ATG4CQ96DT6 458 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 DHTKD1Q96HY7 919 aaPredicted RBP11.91□□□□□ -0.5
NEDD9-201ENST00000379433 COL20A1Q9P218 1284 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 STK17AQ9UEE5 414 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 LIMA1Q9UHB6 759 aaKnown RBP11.91□□□□□ -0.5
NEDD9-201ENST00000379433 NMT1P30419 496 aaKnown RBP11.91□□□□□ -0.5
NEDD9-201ENST00000379433 NCBP1Q09161 790 aaKnown RBP11.91□□□□□ -0.5
NEDD9-201ENST00000379433 KIAA1328Q86T90 577 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 SLFN12Q8IYM2 578 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 SLC16A10Q8TF71 515 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 TSG101Q99816 390 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 NT5C3AQ9H0P0 336 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 CUEDC2Q9H467 287 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 PICK1Q9NRD5 415 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 EMILIN3Q9NT22 766 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 RABGAP1Q9Y3P9 1069 aa11.91□□□□□ -0.5
NEDD9-201ENST00000379433 ETNPPLQ8TBG4 499 aa11.9□□□□□ -0.5
NEDD9-201ENST00000379433 LENG9Q96B70 501 aa11.9□□□□□ -0.5
NEDD9-201ENST00000379433 KCNMB3Q9NPA1 279 aa11.9□□□□□ -0.5
NEDD9-201ENST00000379433 DUSP10Q9Y6W6 482 aa11.9□□□□□ -0.5
NEDD9-201ENST00000379433 LGALS16A8MUM7 142 aa11.9□□□□□ -0.5
NEDD9-201ENST00000379433 AP3B2Q13367 1082 aa11.9□□□□□ -0.5
NEDD9-201ENST00000379433 ADAM9Q13443 819 aa11.9□□□□□ -0.5
NEDD9-201ENST00000379433 TNFAIP1Q13829 316 aa11.9□□□□□ -0.5
NEDD9-201ENST00000379433 KCTD19Q17RG1 926 aaPredicted RBP11.9□□□□□ -0.5
NEDD9-201ENST00000379433 ARSHQ5FYA8 562 aa11.9□□□□□ -0.5
NEDD9-201ENST00000379433 EEPD1Q7L9B9 569 aa11.9□□□□□ -0.5
NEDD9-201ENST00000379433 PRPF38AQ8NAV1 312 aaKnown RBP11.9□□□□□ -0.5
NEDD9-201ENST00000379433 DNAJC19Q96DA6 116 aa11.9□□□□□ -0.5
NEDD9-201ENST00000379433 MRPL11Q9Y3B7 192 aaKnown RBP11.9□□□□□ -0.5
NEDD9-201ENST00000379433 RIPK3Q9Y572 518 aa11.9□□□□□ -0.5
NEDD9-201ENST00000379433 ATRNL1Q5VV63 1379 aa11.9□□□□□ -0.5
NEDD9-201ENST00000379433 C10orf71Q711Q0 1435 aa11.9□□□□□ -0.51
NEDD9-201ENST00000379433 IPO5O00410 1097 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms