RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 MRPL42Q9Y6G3 142 aaKnown RBP20.45■□□□□ 0.86
PDLIM4-202ENST00000379018 WDFY4Q6ZS81 3184 aa20.45■□□□□ 0.86
PDLIM4-202ENST00000379018 ZNF318Q5VUA4 2279 aa20.44■□□□□ 0.86
PDLIM4-202ENST00000379018 E7EWF7 191 aa20.44■□□□□ 0.86
PDLIM4-202ENST00000379018 MRPS6P82932 125 aaKnown RBP20.44■□□□□ 0.86
PDLIM4-202ENST00000379018 TSHZ1Q6ZSZ6 1077 aa20.44■□□□□ 0.86
PDLIM4-202ENST00000379018 ADGRD2Q7Z7M1 963 aa20.44■□□□□ 0.86
PDLIM4-202ENST00000379018 GIMAP8Q8ND71 665 aaPredicted RBP20.44■□□□□ 0.86
PDLIM4-202ENST00000379018 CTCFLQ8NI51 663 aaPredicted RBP20.44■□□□□ 0.86
PDLIM4-202ENST00000379018 LINC01599Q8WXQ3 324 aa20.44■□□□□ 0.86
PDLIM4-202ENST00000379018 SEPT1Q8WYJ6 367 aa20.44■□□□□ 0.86
PDLIM4-202ENST00000379018 CLP1Q92989 425 aaKnown RBP20.44■□□□□ 0.86
PDLIM4-202ENST00000379018 AGO3Q9H9G7 860 aaKnown RBP20.44■□□□□ 0.86
PDLIM4-202ENST00000379018 ERAP1Q9NZ08 941 aa20.44■□□□□ 0.86
PDLIM4-202ENST00000379018 PLAGL2Q9UPG8 496 aa20.44■□□□□ 0.86
PDLIM4-202ENST00000379018 LOXHD1Q8IVV2 1947 aa20.44■□□□□ 0.86
PDLIM4-202ENST00000379018 GSTTP1A0A1W2PQM5 241 aa20.43■□□□□ 0.86
PDLIM4-202ENST00000379018 MEIS2O14770 477 aa20.43■□□□□ 0.86
PDLIM4-202ENST00000379018 KCNA2P16389 499 aa20.43■□□□□ 0.86
PDLIM4-202ENST00000379018 UBE2SQ16763 222 aa20.43■□□□□ 0.86
PDLIM4-202ENST00000379018 RBM23Q86U06 439 aaKnown RBP20.43■□□□□ 0.86
PDLIM4-202ENST00000379018 CMTR1Q8N1G2 835 aaKnown RBP20.43■□□□□ 0.86
PDLIM4-202ENST00000379018 ZNF689Q96CS4 500 aaPredicted RBP20.43■□□□□ 0.86
PDLIM4-202ENST00000379018 GPRASP2Q96D09 838 aa20.43■□□□□ 0.86
PDLIM4-202ENST00000379018 MFSD14AQ96MC6 490 aa20.43■□□□□ 0.86
PDLIM4-202ENST00000379018 TECTAO75443 2155 aa20.43■□□□□ 0.86
PDLIM4-202ENST00000379018 M0QZ92 97 aa20.42■□□□□ 0.86
PDLIM4-202ENST00000379018 PPFIA3O75145 1194 aa20.42■□□□□ 0.86
PDLIM4-202ENST00000379018 DGKIO75912 1065 aa20.42■□□□□ 0.86
PDLIM4-202ENST00000379018 PLEKHA8P1O95397 391 aa20.42■□□□□ 0.86
PDLIM4-202ENST00000379018 ITGB1P05556 798 aa20.42■□□□□ 0.86
PDLIM4-202ENST00000379018 GSPT1P15170 499 aaKnown RBP20.42■□□□□ 0.86
PDLIM4-202ENST00000379018 DNAJB1P25685 340 aa20.42■□□□□ 0.86
PDLIM4-202ENST00000379018 GATMP50440 423 aa20.42■□□□□ 0.86
PDLIM4-202ENST00000379018 ANTXR2P58335 489 aa20.42■□□□□ 0.86
PDLIM4-202ENST00000379018 XRRA1Q6P2D8 792 aa20.42■□□□□ 0.86
PDLIM4-202ENST00000379018 RAB11FIP4Q86YS3 637 aa20.42■□□□□ 0.86
PDLIM4-202ENST00000379018 ZNF654Q8IZM8 581 aa20.42■□□□□ 0.86
PDLIM4-202ENST00000379018 EXOC6Q8TAG9 804 aa20.42■□□□□ 0.86
PDLIM4-202ENST00000379018 PPP2R3CQ969Q6 453 aa20.42■□□□□ 0.86
PDLIM4-202ENST00000379018 PLVAPQ9BX97 442 aa20.42■□□□□ 0.86
PDLIM4-202ENST00000379018 TRPC6Q9Y210 931 aa20.42■□□□□ 0.86
PDLIM4-202ENST00000379018 PCDHGC5Q9Y5F6 944 aa20.42■□□□□ 0.86
PDLIM4-202ENST00000379018 TRIOO75962 3097 aa20.42■□□□□ 0.86
PDLIM4-202ENST00000379018 hCG_1642624A0A1W2PR95 340 aa20.41■□□□□ 0.86
PDLIM4-202ENST00000379018 ITGB5P18084 799 aa20.41■□□□□ 0.86
PDLIM4-202ENST00000379018 RXRAP19793 462 aa20.41■□□□□ 0.86
PDLIM4-202ENST00000379018 KIF5BP33176 963 aa20.41■□□□□ 0.86
PDLIM4-202ENST00000379018 NRIP1P48552 1158 aa20.41■□□□□ 0.86
PDLIM4-202ENST00000379018 ADAM15Q13444 863 aa20.41■□□□□ 0.86
PDLIM4-202ENST00000379018 MTMR1Q13613 665 aa20.41■□□□□ 0.86
PDLIM4-202ENST00000379018 CAMK1Q14012 370 aa20.41■□□□□ 0.86
PDLIM4-202ENST00000379018 HERC4Q5GLZ8 1057 aaPredicted RBP20.41■□□□□ 0.86
PDLIM4-202ENST00000379018 MARCH8Q5T0T0 291 aa20.41■□□□□ 0.86
PDLIM4-202ENST00000379018 TTC22Q5TAA0 569 aa20.41■□□□□ 0.86
PDLIM4-202ENST00000379018 NFXL1Q6ZNB6 911 aa20.41■□□□□ 0.86
PDLIM4-202ENST00000379018 KLHL23Q8NBE8 558 aa20.41■□□□□ 0.86
PDLIM4-202ENST00000379018 TRAPPC12Q8WVT3 735 aa20.41■□□□□ 0.86
PDLIM4-202ENST00000379018 RUFY2Q8WXA3 655 aa20.41■□□□□ 0.86
PDLIM4-202ENST00000379018 CDHR1Q96JP9 859 aa20.41■□□□□ 0.86
PDLIM4-202ENST00000379018 SPZ1Q9BXG8 430 aa20.41■□□□□ 0.86
PDLIM4-202ENST00000379018 SMARCAD1Q9H4L7 1026 aa20.41■□□□□ 0.86
PDLIM4-202ENST00000379018 PSTPIP2Q9H939 334 aa20.41■□□□□ 0.86
PDLIM4-202ENST00000379018 MBLAC1A4D2B0 266 aaPredicted RBP20.4■□□□□ 0.86
PDLIM4-202ENST00000379018 PIK3CDO00329 1044 aa20.4■□□□□ 0.86
PDLIM4-202ENST00000379018 INSRRP14616 1297 aa20.4■□□□□ 0.86
PDLIM4-202ENST00000379018 AAMPQ13685 434 aa20.4■□□□□ 0.86
PDLIM4-202ENST00000379018 NPAS4Q8IUM7 802 aa20.4■□□□□ 0.86
PDLIM4-202ENST00000379018 CMTR2Q8IYT2 770 aaKnown RBP20.4■□□□□ 0.86
PDLIM4-202ENST00000379018 IGDCC4Q8TDY8 1250 aa20.4■□□□□ 0.86
PDLIM4-202ENST00000379018 POF1BQ8WVV4 589 aa20.4■□□□□ 0.86
PDLIM4-202ENST00000379018 KCNH6Q9H252 994 aa20.4■□□□□ 0.86
PDLIM4-202ENST00000379018 LRFN2Q9ULH4 789 aa20.4■□□□□ 0.86
PDLIM4-202ENST00000379018 BARX2Q9UMQ3 279 aaPredicted RBP20.4■□□□□ 0.86
PDLIM4-202ENST00000379018 TRPV2Q9Y5S1 764 aa20.4■□□□□ 0.86
PDLIM4-202ENST00000379018 DDAH1O94760 285 aa20.39■□□□□ 0.85
PDLIM4-202ENST00000379018 PAK2Q13177 524 aa20.39■□□□□ 0.85
PDLIM4-202ENST00000379018 TMEM266Q2M3C6 531 aa20.39■□□□□ 0.85
PDLIM4-202ENST00000379018 SPOUT1Q5T280 376 aaKnown RBP20.39■□□□□ 0.85
PDLIM4-202ENST00000379018 IER5Q5VY09 327 aa20.39■□□□□ 0.85
PDLIM4-202ENST00000379018 CASC1Q6TDU7 716 aa20.39■□□□□ 0.85
PDLIM4-202ENST00000379018 RTN4RL1Q86UN2 441 aaPredicted RBP20.39■□□□□ 0.85
PDLIM4-202ENST00000379018 MB21D2Q8IYB1 491 aaPredicted RBP20.39■□□□□ 0.85
PDLIM4-202ENST00000379018 CCDC82Q8N4S0 544 aa20.39■□□□□ 0.85
PDLIM4-202ENST00000379018 SPPL3Q8TCT6 385 aa20.39■□□□□ 0.85
PDLIM4-202ENST00000379018 MICAL1Q8TDZ2 1067 aa20.39■□□□□ 0.85
PDLIM4-202ENST00000379018 PHOX2BQ99453 314 aa20.39■□□□□ 0.85
PDLIM4-202ENST00000379018 AZI2Q9H6S1 392 aa20.39■□□□□ 0.85
PDLIM4-202ENST00000379018 LY9Q9HBG7 655 aa20.39■□□□□ 0.85
PDLIM4-202ENST00000379018 GINS2Q9Y248 185 aa20.39■□□□□ 0.85
PDLIM4-202ENST00000379018 SPDYE3A6NKU9 549 aa20.38■□□□□ 0.85
PDLIM4-202ENST00000379018 STAG3L1P0CL83 205 aa20.38■□□□□ 0.85
PDLIM4-202ENST00000379018 SCG2P13521 617 aa20.38■□□□□ 0.85
PDLIM4-202ENST00000379018 PDE4AP27815 886 aa20.38■□□□□ 0.85
PDLIM4-202ENST00000379018 SRBD1Q8N5C6 995 aaKnown RBP20.38■□□□□ 0.85
PDLIM4-202ENST00000379018 EDAQ92838 391 aa20.38■□□□□ 0.85
PDLIM4-202ENST00000379018 P2RX5Q93086 422 aa20.38■□□□□ 0.85
PDLIM4-202ENST00000379018 PBXIP1Q96AQ6 731 aa20.38■□□□□ 0.85
PDLIM4-202ENST00000379018 MSLNLQ96KJ4 702 aa20.38■□□□□ 0.85
PDLIM4-202ENST00000379018 PCYT2Q99447 389 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms