RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 MAGEC2Q9UBF1 373 aaPredicted RBP21.53■■□□□ 1.04
SSU72-204ENST00000378726 FHOD1Q9Y613 1164 aa21.53■■□□□ 1.04
SSU72-204ENST00000378726 MYPNQ86TC9 1320 aa21.53■■□□□ 1.04
SSU72-204ENST00000378726 RLFQ13129 1914 aa21.53■■□□□ 1.04
SSU72-204ENST00000378726 DDX39AO00148 427 aaKnown RBP21.53■■□□□ 1.04
SSU72-204ENST00000378726 URI1O94763 535 aaPredicted RBP21.53■■□□□ 1.04
SSU72-204ENST00000378726 EYA4O95677 639 aa21.53■■□□□ 1.04
SSU72-204ENST00000378726 BMS1Q14692 1282 aaKnown RBP21.53■■□□□ 1.04
SSU72-204ENST00000378726 ANKRD13AQ8IZ07 590 aa21.53■■□□□ 1.04
SSU72-204ENST00000378726 PIGOQ8TEQ8 1089 aa21.53■■□□□ 1.04
SSU72-204ENST00000378726 CLMNQ96JQ2 1002 aa21.53■■□□□ 1.04
SSU72-204ENST00000378726 TBC1D7Q9P0N9 293 aa21.53■■□□□ 1.04
SSU72-204ENST00000378726 IRF6O14896 467 aa21.52■■□□□ 1.04
SSU72-204ENST00000378726 PBX1P40424 430 aa21.52■■□□□ 1.04
SSU72-204ENST00000378726 PPATQ06203 517 aa21.52■■□□□ 1.04
SSU72-204ENST00000378726 MTMR1Q13613 665 aa21.52■■□□□ 1.04
SSU72-204ENST00000378726 GIT2Q14161 759 aa21.52■■□□□ 1.04
SSU72-204ENST00000378726 EAPPQ56P03 285 aaPredicted RBP21.52■■□□□ 1.04
SSU72-204ENST00000378726 ZHX3Q9H4I2 956 aa21.52■■□□□ 1.04
SSU72-204ENST00000378726 AGO4Q9HCK5 861 aaKnown RBP21.52■■□□□ 1.04
SSU72-204ENST00000378726 MYOCDQ8IZQ8 938 aa21.52■■□□□ 1.04
SSU72-204ENST00000378726 OTUD5Q96G74 571 aa21.52■■□□□ 1.04
SSU72-204ENST00000378726 PPP2R2CQ9Y2T4 447 aa21.52■■□□□ 1.04
SSU72-204ENST00000378726 PCDHA2Q9Y5H9 948 aa21.52■■□□□ 1.04
SSU72-204ENST00000378726 PARP14Q460N5 1801 aa21.51■■□□□ 1.03
SSU72-204ENST00000378726 FRMD3A2A2Y4 597 aa21.51■■□□□ 1.03
SSU72-204ENST00000378726 DHX15O43143 795 aaKnown RBP21.51■■□□□ 1.03
SSU72-204ENST00000378726 ERO1BQ86YB8 467 aa21.51■■□□□ 1.03
SSU72-204ENST00000378726 CARD6Q9BX69 1037 aa21.51■■□□□ 1.03
SSU72-204ENST00000378726 ZBTB39O15060 712 aa21.51■■□□□ 1.03
SSU72-204ENST00000378726 GADL1Q6ZQY3 521 aa21.51■■□□□ 1.03
SSU72-204ENST00000378726 UBXN4Q92575 508 aa21.51■■□□□ 1.03
SSU72-204ENST00000378726 TAF1DQ9H5J8 278 aaPredicted RBP21.51■■□□□ 1.03
SSU72-204ENST00000378726 ACAD9Q9H845 621 aa21.51■■□□□ 1.03
SSU72-204ENST00000378726 ARHGAP6O43182 974 aa21.5■■□□□ 1.03
SSU72-204ENST00000378726 ZSCAN12O43309 604 aa21.5■■□□□ 1.03
SSU72-204ENST00000378726 TADA3O75528 432 aa21.5■■□□□ 1.03
SSU72-204ENST00000378726 MUTP22033 750 aa21.5■■□□□ 1.03
SSU72-204ENST00000378726 ADKP55263 362 aaKnown RBP21.5■■□□□ 1.03
SSU72-204ENST00000378726 ITGB3BPQ13352 177 aaPredicted RBP21.5■■□□□ 1.03
SSU72-204ENST00000378726 VSIG10LQ86VR7 867 aa21.5■■□□□ 1.03
SSU72-204ENST00000378726 MNS1Q8NEH6 495 aa21.5■■□□□ 1.03
SSU72-204ENST00000378726 NACC1Q96RE7 527 aa21.5■■□□□ 1.03
SSU72-204ENST00000378726 REEP2Q9BRK0 252 aa21.5■■□□□ 1.03
SSU72-204ENST00000378726 MIER3Q7Z3K6 550 aa21.49■■□□□ 1.03
SSU72-204ENST00000378726 FAM114A1Q8IWE2 563 aa21.49■■□□□ 1.03
SSU72-204ENST00000378726 BAG1Q99933 345 aaPredicted RBP21.49■■□□□ 1.03
SSU72-204ENST00000378726 FGFBP2Q9BYJ0 223 aa21.49■■□□□ 1.03
SSU72-204ENST00000378726 TBC1D22BQ9NU19 505 aa21.49■■□□□ 1.03
SSU72-204ENST00000378726 A0A0U1RQG5 324 aaPredicted RBP21.49■■□□□ 1.03
SSU72-204ENST00000378726 GRIN3BO60391 1043 aa21.49■■□□□ 1.03
SSU72-204ENST00000378726 NR3C2P08235 984 aa21.49■■□□□ 1.03
SSU72-204ENST00000378726 PNMA6AP0CW24 399 aaPredicted RBP21.49■■□□□ 1.03
SSU72-204ENST00000378726 UBXN1Q04323 297 aa21.49■■□□□ 1.03
SSU72-204ENST00000378726 LRRC63Q05C16 580 aa21.49■■□□□ 1.03
SSU72-204ENST00000378726 RINT1Q6NUQ1 792 aa21.49■■□□□ 1.03
SSU72-204ENST00000378726 XRRA1Q6P2D8 792 aa21.49■■□□□ 1.03
SSU72-204ENST00000378726 PPFIBP1Q86W92 1011 aa21.49■■□□□ 1.03
SSU72-204ENST00000378726 TC2NQ8N9U0 490 aa21.49■■□□□ 1.03
SSU72-204ENST00000378726 NSUN6Q8TEA1 469 aaKnown RBP21.49■■□□□ 1.03
SSU72-204ENST00000378726 RUSC1Q9BVN2 902 aa21.49■■□□□ 1.03
SSU72-204ENST00000378726 A1CFQ9NQ94 594 aaKnown RBP21.49■■□□□ 1.03
SSU72-204ENST00000378726 CYP39A1Q9NYL5 469 aa21.49■■□□□ 1.03
SSU72-204ENST00000378726 WRAP73Q9P2S5 460 aaPredicted RBP21.49■■□□□ 1.03
SSU72-204ENST00000378726 A0A0G2JLL6 359 aaPredicted RBP21.48■■□□□ 1.03
SSU72-204ENST00000378726 TESPA1A2RU30 521 aaPredicted RBP21.48■■□□□ 1.03
SSU72-204ENST00000378726 LBX2Q6XYB7 198 aa21.48■■□□□ 1.03
SSU72-204ENST00000378726 ILDR2Q71H61 639 aa21.48■■□□□ 1.03
SSU72-204ENST00000378726 PRRT2Q7Z6L0 340 aaPredicted RBP21.48■■□□□ 1.03
SSU72-204ENST00000378726 BANK1Q8NDB2 785 aa21.48■■□□□ 1.03
SSU72-204ENST00000378726 CNOT6LQ96LI5 555 aaKnown RBP21.48■■□□□ 1.03
SSU72-204ENST00000378726 TUBGCP2Q9BSJ2 902 aa21.48■■□□□ 1.03
SSU72-204ENST00000378726 ZC3H4Q9UPT8 1303 aaKnown RBP21.48■■□□□ 1.03
SSU72-204ENST00000378726 COL11A1P12107 1806 aaPredicted RBP21.48■■□□□ 1.03
SSU72-204ENST00000378726 IQCA1LA6NCM1 817 aa21.48■■□□□ 1.03
SSU72-204ENST00000378726 SPDYE5A6NIY4 337 aa21.48■■□□□ 1.03
SSU72-204ENST00000378726 PES1O00541 588 aaKnown RBP21.48■■□□□ 1.03
SSU72-204ENST00000378726 CXCL11O14625 94 aa21.48■■□□□ 1.03
SSU72-204ENST00000378726 ATP9AO75110 1047 aa21.48■■□□□ 1.03
SSU72-204ENST00000378726 ZRANB2O95218 330 aaKnown RBP eCLIP21.48■■□□□ 1.03
SSU72-204ENST00000378726 CCND2P30279 289 aa21.48■■□□□ 1.03
SSU72-204ENST00000378726 PLA2G4AP47712 749 aa21.48■■□□□ 1.03
SSU72-204ENST00000378726 RBL2Q08999 1139 aa21.48■■□□□ 1.03
SSU72-204ENST00000378726 TOGARAM2Q6ZUX3 1019 aa21.48■■□□□ 1.03
SSU72-204ENST00000378726 PROCA1Q8NCQ7 364 aaPredicted RBP21.48■■□□□ 1.03
SSU72-204ENST00000378726 CPLX3Q8WVH0 158 aa21.48■■□□□ 1.03
SSU72-204ENST00000378726 TSG101Q99816 390 aa21.48■■□□□ 1.03
SSU72-204ENST00000378726 LXNQ9BS40 222 aa21.48■■□□□ 1.03
SSU72-204ENST00000378726 POLD4Q9HCU8 107 aa21.48■■□□□ 1.03
SSU72-204ENST00000378726 AKR1B15C9JRZ8 316 aaPredicted RBP21.47■■□□□ 1.03
SSU72-204ENST00000378726 FGFR1OPO95684 399 aaKnown RBP21.47■■□□□ 1.03
SSU72-204ENST00000378726 WDR24Q96S15 920 aa21.47■■□□□ 1.03
SSU72-204ENST00000378726 SAMM50Q9Y512 469 aa21.47■■□□□ 1.03
SSU72-204ENST00000378726 ITIH6Q6UXX5 1313 aa21.47■■□□□ 1.03
SSU72-204ENST00000378726 PEX10O60683 326 aa21.47■■□□□ 1.03
SSU72-204ENST00000378726 P4HBP07237 508 aaKnown RBP21.47■■□□□ 1.03
SSU72-204ENST00000378726 C1orf186Q6ZWK4 172 aa21.47■■□□□ 1.03
SSU72-204ENST00000378726 NEK9Q8TD19 979 aa21.47■■□□□ 1.03
SSU72-204ENST00000378726 SCFD1Q8WVM8 642 aa21.47■■□□□ 1.03
SSU72-204ENST00000378726 EPC1Q9H2F5 836 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms