RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 JMJD4Q9H9V9 463 aa19.71■□□□□ 0.75
GNE-201ENST00000377902 GOLGA6L10A6NI86 522 aa19.7■□□□□ 0.74
GNE-201ENST00000377902 NR2F2P24468 414 aa19.7■□□□□ 0.74
GNE-201ENST00000377902 USP11P51784 963 aa19.7■□□□□ 0.74
GNE-201ENST00000377902 ORC2Q13416 577 aaPredicted RBP19.7■□□□□ 0.74
GNE-201ENST00000377902 PICALMQ13492 652 aa19.7■□□□□ 0.74
GNE-201ENST00000377902 ARSHQ5FYA8 562 aa19.7■□□□□ 0.74
GNE-201ENST00000377902 ADGRF4Q8IZF3 695 aa19.7■□□□□ 0.74
GNE-201ENST00000377902 LRRC57Q8N9N7 239 aa19.7■□□□□ 0.74
GNE-201ENST00000377902 CABS1Q96KC9 395 aa19.7■□□□□ 0.74
GNE-201ENST00000377902 SPAG5Q96R06 1193 aa19.7■□□□□ 0.74
GNE-201ENST00000377902 JPH2Q9BR39 696 aaPredicted RBP19.7■□□□□ 0.74
GNE-201ENST00000377902 NAGPAQ9UK23 515 aa19.7■□□□□ 0.74
GNE-201ENST00000377902 HDAC9Q9UKV0 1011 aa19.7■□□□□ 0.74
GNE-201ENST00000377902 NOC2LQ9Y3T9 749 aaKnown RBP19.7■□□□□ 0.74
GNE-201ENST00000377902 UCHL3P15374 230 aa19.7■□□□□ 0.74
GNE-201ENST00000377902 COL14A1Q05707 1796 aaKnown RBP19.7■□□□□ 0.74
GNE-201ENST00000377902 TPTE2Q6XPS3 522 aa19.7■□□□□ 0.74
GNE-201ENST00000377902 LRRC27Q9C0I9 530 aa19.7■□□□□ 0.74
GNE-201ENST00000377902 NYXQ9GZU5 481 aa19.7■□□□□ 0.74
GNE-201ENST00000377902 BMP2KQ9NSY1 1161 aaPredicted RBP19.7■□□□□ 0.74
GNE-201ENST00000377902 MEIS1O00470 390 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 AKR1B1P15121 316 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 CYP11B2P19099 503 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 SF3A3Q12874 501 aaKnown RBP eCLIP19.69■□□□□ 0.74
GNE-201ENST00000377902 ODF2Q5BJF6 829 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 ALKBH5Q6P6C2 394 aaKnown RBP19.69■□□□□ 0.74
GNE-201ENST00000377902 CCDC65Q8IXS2 484 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 CCDC13Q8IYE1 715 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 NCAPGQ9BPX3 1015 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 TRIM31Q9BZY9 425 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 MTMR4Q9NYA4 1195 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 POTEFA5A3E0 1075 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 USP17L15C9J2P7 530 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 USP17L13C9JLJ4 530 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 USP17L11C9JVI0 530 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 USP17L18D6R9N7 530 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 USP17L22D6RA61 530 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 USP17L17D6RBQ6 530 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 USP17L19D6RCP7 530 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 USP17L20D6RJB6 530 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 KRIT1O00522 736 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 TTI1O43156 1089 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 POTEIP0CG38 1075 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 ZBTB48P10074 688 aaPredicted RBP19.69■□□□□ 0.74
GNE-201ENST00000377902 RHBDL3P58872 404 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 PSMC6P62333 389 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 USP17L24Q0WX57 530 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 DCAF17Q5H9S7 520 aaPredicted RBP19.69■□□□□ 0.74
GNE-201ENST00000377902 PPP4R3AQ6IN85 833 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 USP17L6PQ6QN14 398 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 POTEGQ6S5H5 508 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 POTEEQ6S8J3 1075 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 DPH5Q9H2P9 285 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 DDX20Q9UHI6 824 aaKnown RBP19.69■□□□□ 0.74
GNE-201ENST00000377902 SLC12A6Q9UHW9 1150 aa19.69■□□□□ 0.74
GNE-201ENST00000377902 NOVA2Q9UNW9 492 aaKnown RBP19.69■□□□□ 0.74
GNE-201ENST00000377902 ATXN2Q99700 1313 aaKnown RBP19.68■□□□□ 0.74
GNE-201ENST00000377902 MED24O75448 989 aa19.68■□□□□ 0.74
GNE-201ENST00000377902 KRT18P05783 430 aaKnown RBP19.68■□□□□ 0.74
GNE-201ENST00000377902 LDHCP07864 332 aa19.68■□□□□ 0.74
GNE-201ENST00000377902 IBSPP21815 317 aaPredicted RBP19.68■□□□□ 0.74
GNE-201ENST00000377902 SMARCA1P28370 1054 aa19.68■□□□□ 0.74
GNE-201ENST00000377902 ARHGAP27Q6ZUM4 889 aa19.68■□□□□ 0.74
GNE-201ENST00000377902 IKZF4Q9H2S9 585 aa19.68■□□□□ 0.74
GNE-201ENST00000377902 NR2E1Q9Y466 385 aa19.68■□□□□ 0.74
GNE-201ENST00000377902 GPR75-ASB3A0A0A6YYF3 556 aa19.68■□□□□ 0.74
GNE-201ENST00000377902 PON1P27169 355 aa19.68■□□□□ 0.74
GNE-201ENST00000377902 MARSP56192 900 aaKnown RBP19.68■□□□□ 0.74
GNE-201ENST00000377902 ACTN3Q08043 901 aaPredicted RBP19.68■□□□□ 0.74
GNE-201ENST00000377902 C6orf89Q6UWU4 347 aa19.68■□□□□ 0.74
GNE-201ENST00000377902 DPP8Q6V1X1 898 aaPredicted RBP19.68■□□□□ 0.74
GNE-201ENST00000377902 MICALCLQ6ZW33 695 aa19.68■□□□□ 0.74
GNE-201ENST00000377902 KCTD1Q719H9 257 aa19.68■□□□□ 0.74
GNE-201ENST00000377902 ADAT2Q7Z6V5 191 aaKnown RBP19.68■□□□□ 0.74
GNE-201ENST00000377902 TPCN2Q8NHX9 752 aa19.68■□□□□ 0.74
GNE-201ENST00000377902 PAGR1Q9BTK6 254 aa19.68■□□□□ 0.74
GNE-201ENST00000377902 MYH7BA7E2Y1 1941 aa19.67■□□□□ 0.74
GNE-201ENST00000377902 USP17L10C9JJH3 530 aa19.67■□□□□ 0.74
GNE-201ENST00000377902 ATP2C2O75185 946 aa19.67■□□□□ 0.74
GNE-201ENST00000377902 GNA14O95837 355 aa19.67■□□□□ 0.74
GNE-201ENST00000377902 RFC4P35249 363 aa19.67■□□□□ 0.74
GNE-201ENST00000377902 HOXD13P35453 343 aa19.67■□□□□ 0.74
GNE-201ENST00000377902 COPB2P35606 906 aa19.67■□□□□ 0.74
GNE-201ENST00000377902 ACTRT1Q8TDG2 376 aa19.67■□□□□ 0.74
GNE-201ENST00000377902 DNAJC5Q9H3Z4 198 aa19.67■□□□□ 0.74
GNE-201ENST00000377902 NARFQ9UHQ1 456 aa19.67■□□□□ 0.74
GNE-201ENST00000377902 GMNCA6NCL1 334 aa19.67■□□□□ 0.74
GNE-201ENST00000377902 CETN3O15182 167 aa19.67■□□□□ 0.74
GNE-201ENST00000377902 CLK2P49760 499 aaKnown RBP19.67■□□□□ 0.74
GNE-201ENST00000377902 TCERG1LQ5VWI1 586 aa19.67■□□□□ 0.74
GNE-201ENST00000377902 VCPKMTQ9H867 229 aa19.67■□□□□ 0.74
GNE-201ENST00000377902 GEMIN8Q9NWZ8 242 aaKnown RBP19.67■□□□□ 0.74
GNE-201ENST00000377902 CDK5RAP2Q96SN8 1893 aa19.67■□□□□ 0.74
GNE-201ENST00000377902 PGRMC1O00264 195 aaKnown RBP19.66■□□□□ 0.74
GNE-201ENST00000377902 GNPATO15228 680 aa19.66■□□□□ 0.74
GNE-201ENST00000377902 CASP4P49662 377 aa19.66■□□□□ 0.74
GNE-201ENST00000377902 NT5C2P49902 561 aa19.66■□□□□ 0.74
GNE-201ENST00000377902 PEX26Q7Z412 305 aa19.66■□□□□ 0.74
GNE-201ENST00000377902 ZNF804AQ7Z570 1209 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms