RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 LRRC4Q9HBW1 653 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 CIITAP33076 1130 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 STAT3P40763 770 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 GTF2A2P52657 109 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 RPS6KA1Q15418 735 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 STYK1Q6J9G0 422 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 ARMCX2Q7L311 632 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 CROCCP2Q86T23 111 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 OXER1Q8TDS5 423 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 NSUN6Q8TEA1 469 aaKnown RBP11.73□□□□□ -0.53
HIF3A-205ENST00000377670 ACAD9Q9H845 621 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 ALDH1A1P00352 501 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 CEP128Q6ZU80 1094 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 RMDN3Q96TC7 470 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 POLD4Q9HCU8 107 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 DCP1AQ9NPI6 582 aaPredicted RBP11.73□□□□□ -0.53
HIF3A-205ENST00000377670 KIAA1024Q9UPX6 916 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 DCDC2CA8MYV0 355 aa11.72□□□□□ -0.53
HIF3A-205ENST00000377670 TFAMQ00059 246 aaKnown RBP11.72□□□□□ -0.53
HIF3A-205ENST00000377670 TSPY1Q01534 308 aa11.72□□□□□ -0.53
HIF3A-205ENST00000377670 VEPH1Q14D04 833 aa11.72□□□□□ -0.53
HIF3A-205ENST00000377670 HADHQ16836 314 aaKnown RBP11.72□□□□□ -0.53
HIF3A-205ENST00000377670 ANKRD13AQ8IZ07 590 aa11.72□□□□□ -0.53
HIF3A-205ENST00000377670 IFIH1Q9BYX4 1025 aaKnown RBP11.72□□□□□ -0.53
HIF3A-205ENST00000377670 SEPT10Q9P0V9 454 aa11.72□□□□□ -0.53
HIF3A-205ENST00000377670 TSKSQ9UJT2 592 aa11.72□□□□□ -0.53
HIF3A-205ENST00000377670 FAM184BQ9ULE4 1060 aa11.72□□□□□ -0.53
HIF3A-205ENST00000377670 IFNAR1P17181 557 aa11.72□□□□□ -0.53
HIF3A-205ENST00000377670 CRAMP1Q96RY5 1269 aa11.72□□□□□ -0.53
HIF3A-205ENST00000377670 RPF1Q9H9Y2 349 aaKnown RBP11.72□□□□□ -0.53
HIF3A-205ENST00000377670 GBA2Q9HCG7 927 aaPredicted RBP11.72□□□□□ -0.53
HIF3A-205ENST00000377670 TOPORSQ9NS56 1045 aaPredicted RBP11.72□□□□□ -0.53
HIF3A-205ENST00000377670 SLC8A1P32418 973 aa11.72□□□□□ -0.53
HIF3A-205ENST00000377670 TGFB2P61812 414 aa11.72□□□□□ -0.53
HIF3A-205ENST00000377670 RAB3IPQ96QF0 476 aaPredicted RBP11.72□□□□□ -0.53
HIF3A-205ENST00000377670 SPATA31A5Q5VU36 1347 aa11.72□□□□□ -0.53
HIF3A-205ENST00000377670 SPATA31A7Q8IWB4 1347 aa11.72□□□□□ -0.53
HIF3A-205ENST00000377670 RPSAP08865 295 aaKnown RBP11.72□□□□□ -0.53
HIF3A-205ENST00000377670 KRT15P19012 456 aa11.72□□□□□ -0.53
HIF3A-205ENST00000377670 AFAP1L2Q8N4X5 818 aa11.72□□□□□ -0.53
HIF3A-205ENST00000377670 ENAHQ8N8S7 591 aaPredicted RBP11.72□□□□□ -0.53
HIF3A-205ENST00000377670 DCAF4Q8WV16 495 aa11.72□□□□□ -0.53
HIF3A-205ENST00000377670 KATNAL1Q9BW62 490 aa11.72□□□□□ -0.53
HIF3A-205ENST00000377670 NUF2Q9BZD4 464 aa11.72□□□□□ -0.53
HIF3A-205ENST00000377670 PANK4Q9NVE7 773 aa11.72□□□□□ -0.53
HIF3A-205ENST00000377670 PCDHA4Q9UN74 947 aa11.72□□□□□ -0.53
HIF3A-205ENST00000377670 SPDYE2BA6NHP3 402 aa11.71□□□□□ -0.53
HIF3A-205ENST00000377670 NEMP1O14524 444 aa11.71□□□□□ -0.53
HIF3A-205ENST00000377670 RGS16O15492 202 aaPredicted RBP11.71□□□□□ -0.53
HIF3A-205ENST00000377670 GNA14O95837 355 aa11.71□□□□□ -0.53
HIF3A-205ENST00000377670 SPDYE6P0CI01 402 aa11.71□□□□□ -0.53
HIF3A-205ENST00000377670 ETF1P62495 437 aaKnown RBP11.71□□□□□ -0.53
HIF3A-205ENST00000377670 CLEC10AQ8IUN9 316 aa11.71□□□□□ -0.53
HIF3A-205ENST00000377670 CCDC105Q8IYK2 499 aa11.71□□□□□ -0.53
HIF3A-205ENST00000377670 SIX6OS1Q8N1H7 587 aa11.71□□□□□ -0.53
HIF3A-205ENST00000377670 RPGRIP1Q96KN7 1286 aa11.71□□□□□ -0.53
HIF3A-205ENST00000377670 MYO1AQ9UBC5 1043 aa11.71□□□□□ -0.53
HIF3A-205ENST00000377670 CLTAP09496 248 aa11.71□□□□□ -0.53
HIF3A-205ENST00000377670 NDUFAF2Q8N183 169 aa11.71□□□□□ -0.53
HIF3A-205ENST00000377670 KAZALD1Q96I82 304 aa11.71□□□□□ -0.53
HIF3A-205ENST00000377670 SPATA33Q96N06 139 aa11.71□□□□□ -0.53
HIF3A-205ENST00000377670 NCAPGQ9BPX3 1015 aa11.71□□□□□ -0.53
HIF3A-205ENST00000377670 ADARB2Q9NS39 739 aaKnown RBP11.71□□□□□ -0.53
HIF3A-205ENST00000377670 MEGF6O75095 1541 aa11.71□□□□□ -0.53
HIF3A-205ENST00000377670 CEMIPQ8WUJ3 1361 aa11.71□□□□□ -0.53
HIF3A-205ENST00000377670 RNF40O75150 1001 aa11.71□□□□□ -0.53
HIF3A-205ENST00000377670 SESN3P58005 492 aa11.71□□□□□ -0.53
HIF3A-205ENST00000377670 SPATS2Q86XZ4 545 aaKnown RBP11.71□□□□□ -0.53
HIF3A-205ENST00000377670 PPLO60437 1756 aa11.71□□□□□ -0.54
HIF3A-205ENST00000377670 A6NJR5 290 aa11.71□□□□□ -0.54
HIF3A-205ENST00000377670 hCG_1984214I3L0E3 225 aa11.71□□□□□ -0.54
HIF3A-205ENST00000377670 HIP1RO75146 1068 aa11.71□□□□□ -0.54
HIF3A-205ENST00000377670 KLRK1P26718 216 aa11.71□□□□□ -0.54
HIF3A-205ENST00000377670 STX2P32856 288 aa11.71□□□□□ -0.54
HIF3A-205ENST00000377670 PHKA2P46019 1235 aa11.71□□□□□ -0.54
HIF3A-205ENST00000377670 MORC3Q14149 939 aa11.71□□□□□ -0.54
HIF3A-205ENST00000377670 RRAGAQ7L523 313 aa11.71□□□□□ -0.54
HIF3A-205ENST00000377670 PEX26Q7Z412 305 aa11.71□□□□□ -0.54
HIF3A-205ENST00000377670 ZNF713Q8N859 430 aaPredicted RBP11.71□□□□□ -0.54
HIF3A-205ENST00000377670 DDX27Q96GQ7 796 aaKnown RBP11.71□□□□□ -0.54
HIF3A-205ENST00000377670 PPP1R13BQ96KQ4 1090 aa11.71□□□□□ -0.54
HIF3A-205ENST00000377670 FOXP1Q9H334 677 aaPredicted RBP11.71□□□□□ -0.54
HIF3A-205ENST00000377670 MED4Q9NPJ6 270 aa11.71□□□□□ -0.54
HIF3A-205ENST00000377670 ANAPC5Q9UJX4 755 aa11.71□□□□□ -0.54
HIF3A-205ENST00000377670 ZDHHC9Q9Y397 364 aa11.71□□□□□ -0.54
HIF3A-205ENST00000377670 RPN1P04843 607 aaKnown RBP11.71□□□□□ -0.54
HIF3A-205ENST00000377670 XRCC5P13010 732 aaKnown RBP11.71□□□□□ -0.54
HIF3A-205ENST00000377670 ZNF34Q8IZ26 560 aa11.71□□□□□ -0.54
HIF3A-205ENST00000377670 GDAP1Q8TB36 358 aa11.71□□□□□ -0.54
HIF3A-205ENST00000377670 RPAP3Q9H6T3 665 aaPredicted RBP11.71□□□□□ -0.54
HIF3A-205ENST00000377670 ZNF609O15014 1411 aa11.71□□□□□ -0.54
HIF3A-205ENST00000377670 KCNJ18B7U540 433 aa11.7□□□□□ -0.54
HIF3A-205ENST00000377670 KLHL30Q0D2K2 578 aa11.7□□□□□ -0.54
HIF3A-205ENST00000377670 KCNJ12Q14500 433 aa11.7□□□□□ -0.54
HIF3A-205ENST00000377670 RNF168Q8IYW5 571 aaPredicted RBP11.7□□□□□ -0.54
HIF3A-205ENST00000377670 MYOCDQ8IZQ8 938 aa11.7□□□□□ -0.54
HIF3A-205ENST00000377670 TTC30BQ8N4P2 665 aa11.7□□□□□ -0.54
HIF3A-205ENST00000377670 FARP1Q9Y4F1 1045 aaPredicted RBP11.7□□□□□ -0.54
HIF3A-205ENST00000377670 FDX1P10109 184 aa11.7□□□□□ -0.54
HIF3A-205ENST00000377670 PALM2Q8IXS6 379 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms