RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 IKQ13123 557 aaPredicted RBP18.86■□□□□ 0.61
TRIM27-201ENST00000377194 POTEGQ6S5H5 508 aa18.86■□□□□ 0.61
TRIM27-201ENST00000377194 POTEEQ6S8J3 1075 aa18.86■□□□□ 0.61
TRIM27-201ENST00000377194 KIAA1328Q86T90 577 aa18.86■□□□□ 0.61
TRIM27-201ENST00000377194 ARHGAP20Q9P2F6 1191 aa18.86■□□□□ 0.61
TRIM27-201ENST00000377194 PLAGL2Q9UPG8 496 aa18.86■□□□□ 0.61
TRIM27-201ENST00000377194 CYP11B2P19099 503 aa18.85■□□□□ 0.61
TRIM27-201ENST00000377194 HOXA13P31271 388 aaPredicted RBP18.85■□□□□ 0.61
TRIM27-201ENST00000377194 PSMC6P62333 389 aa18.85■□□□□ 0.61
TRIM27-201ENST00000377194 KRT83P78385 493 aa18.85■□□□□ 0.61
TRIM27-201ENST00000377194 SETQ01105 290 aaPredicted RBP18.85■□□□□ 0.61
TRIM27-201ENST00000377194 PPARDQ03181 441 aa18.85■□□□□ 0.61
TRIM27-201ENST00000377194 ARSHQ5FYA8 562 aa18.85■□□□□ 0.61
TRIM27-201ENST00000377194 FBXO11Q86XK2 927 aa18.85■□□□□ 0.61
TRIM27-201ENST00000377194 CATSPER3Q86XQ3 398 aa18.85■□□□□ 0.61
TRIM27-201ENST00000377194 CYP2W1Q8TAV3 490 aa18.85■□□□□ 0.61
TRIM27-201ENST00000377194 HDAC7Q8WUI4 952 aa18.85■□□□□ 0.61
TRIM27-201ENST00000377194 GMCL1Q96IK5 515 aa18.85■□□□□ 0.61
TRIM27-201ENST00000377194 CABS1Q96KC9 395 aa18.85■□□□□ 0.61
TRIM27-201ENST00000377194 RPGRIP1Q96KN7 1286 aa18.85■□□□□ 0.61
TRIM27-201ENST00000377194 CSRNP1Q96S65 589 aa18.85■□□□□ 0.61
TRIM27-201ENST00000377194 CYLC1P35663 651 aaPredicted RBP18.85■□□□□ 0.61
TRIM27-201ENST00000377194 SYDE2Q5VT97 1194 aa18.85■□□□□ 0.61
TRIM27-201ENST00000377194 GPBP1Q86WP2 473 aa18.85■□□□□ 0.61
TRIM27-201ENST00000377194 NELFCDQ8IXH7 590 aa18.85■□□□□ 0.61
TRIM27-201ENST00000377194 CCDC170Q8IYT3 715 aa18.85■□□□□ 0.61
TRIM27-201ENST00000377194 SH2D3CQ8N5H7 860 aa18.85■□□□□ 0.61
TRIM27-201ENST00000377194 OTUD6BQ8N6M0 293 aa18.85■□□□□ 0.61
TRIM27-201ENST00000377194 ARL8AQ96BM9 186 aa18.85■□□□□ 0.61
TRIM27-201ENST00000377194 KDM3AQ9Y4C1 1321 aa18.85■□□□□ 0.61
TRIM27-201ENST00000377194 ZEB2O60315 1214 aa18.84■□□□□ 0.61
TRIM27-201ENST00000377194 ECE1P42892 770 aa18.84■□□□□ 0.61
TRIM27-201ENST00000377194 AP3B2Q13367 1082 aa18.84■□□□□ 0.61
TRIM27-201ENST00000377194 KCTD16Q68DU8 428 aa18.84■□□□□ 0.61
TRIM27-201ENST00000377194 NAP1L4Q99733 375 aaKnown RBP18.84■□□□□ 0.61
TRIM27-201ENST00000377194 BMP2KQ9NSY1 1161 aaPredicted RBP18.84■□□□□ 0.61
TRIM27-201ENST00000377194 ATRNL1Q5VV63 1379 aa18.84■□□□□ 0.61
TRIM27-201ENST00000377194 TRAF5O00463 557 aa18.84■□□□□ 0.61
TRIM27-201ENST00000377194 MEIS1O00470 390 aa18.84■□□□□ 0.61
TRIM27-201ENST00000377194 BMP3P12645 472 aa18.84■□□□□ 0.61
TRIM27-201ENST00000377194 HNRNPH3P31942 346 aaKnown RBP18.84■□□□□ 0.61
TRIM27-201ENST00000377194 CDK17Q00537 523 aa18.84■□□□□ 0.61
TRIM27-201ENST00000377194 KCNMA1Q12791 1236 aa18.84■□□□□ 0.61
TRIM27-201ENST00000377194 HERC4Q5GLZ8 1057 aaPredicted RBP18.84■□□□□ 0.61
TRIM27-201ENST00000377194 KIAA1755Q5JYT7 1200 aa18.84■□□□□ 0.61
TRIM27-201ENST00000377194 GIMAP7Q8NHV1 300 aa18.84■□□□□ 0.61
TRIM27-201ENST00000377194 ABCB11O95342 1321 aa18.83■□□□□ 0.61
TRIM27-201ENST00000377194 ENTPD3O75355 529 aa18.83■□□□□ 0.61
TRIM27-201ENST00000377194 ECM2O94769 699 aaPredicted RBP18.83■□□□□ 0.61
TRIM27-201ENST00000377194 KIAA0754O94854 1291 aa18.83■□□□□ 0.61
TRIM27-201ENST00000377194 FGFR1OPO95684 399 aaKnown RBP18.83■□□□□ 0.61
TRIM27-201ENST00000377194 FNTAP49354 379 aa18.83■□□□□ 0.61
TRIM27-201ENST00000377194 SLC12A3P55017 1021 aa18.83■□□□□ 0.61
TRIM27-201ENST00000377194 FKBP3Q00688 224 aaKnown RBP18.83■□□□□ 0.61
TRIM27-201ENST00000377194 RBM26Q5T8P6 1007 aaKnown RBP18.83■□□□□ 0.61
TRIM27-201ENST00000377194 ZNF662Q6ZS27 426 aa18.83■□□□□ 0.61
TRIM27-201ENST00000377194 SMCR8Q8TEV9 937 aaPredicted RBP18.83■□□□□ 0.61
TRIM27-201ENST00000377194 SCFD1Q8WVM8 642 aa18.83■□□□□ 0.61
TRIM27-201ENST00000377194 CNKSR1Q969H4 720 aa18.83■□□□□ 0.61
TRIM27-201ENST00000377194 CENPHQ9H3R5 247 aa18.83■□□□□ 0.61
TRIM27-201ENST00000377194 JADE2Q9NQC1 790 aa18.83■□□□□ 0.61
TRIM27-201ENST00000377194 KRT86O43790 486 aa18.83■□□□□ 0.6
TRIM27-201ENST00000377194 SPATA31C1P0DKV0 1188 aa18.83■□□□□ 0.6
TRIM27-201ENST00000377194 SLFN12Q8IYM2 578 aa18.83■□□□□ 0.6
TRIM27-201ENST00000377194 AENQ8WTP8 325 aaKnown RBP18.83■□□□□ 0.6
TRIM27-201ENST00000377194 CCDC42Q96M95 316 aa18.83■□□□□ 0.6
TRIM27-201ENST00000377194 TSG101Q99816 390 aa18.83■□□□□ 0.6
TRIM27-201ENST00000377194 FAM184BQ9ULE4 1060 aa18.83■□□□□ 0.6
TRIM27-201ENST00000377194 LRRC53A6NM62 1247 aa18.82■□□□□ 0.6
TRIM27-201ENST00000377194 TCP10L2B9ZVM9 353 aa18.82■□□□□ 0.6
TRIM27-201ENST00000377194 PPIP5K2O43314 1243 aa18.82■□□□□ 0.6
TRIM27-201ENST00000377194 C21orf2O43822 256 aa18.82■□□□□ 0.6
TRIM27-201ENST00000377194 MATR3P43243 847 aaKnown RBP eCLIP18.82■□□□□ 0.6
TRIM27-201ENST00000377194 MOXD1Q6UVY6 613 aa18.82■□□□□ 0.6
TRIM27-201ENST00000377194 CCDC84Q86UT8 332 aaPredicted RBP18.82■□□□□ 0.6
TRIM27-201ENST00000377194 BAP1Q92560 729 aa18.82■□□□□ 0.6
TRIM27-201ENST00000377194 COL4A3BPQ9Y5P4 624 aa18.82■□□□□ 0.6
TRIM27-201ENST00000377194 CLRN2A0PK11 232 aa18.82■□□□□ 0.6
TRIM27-201ENST00000377194 MACROD2A1Z1Q3 448 aa18.82■□□□□ 0.6
TRIM27-201ENST00000377194 SLC7A5Q01650 507 aa18.82■□□□□ 0.6
TRIM27-201ENST00000377194 TTMPQ5BVD1 217 aa18.82■□□□□ 0.6
TRIM27-201ENST00000377194 SLC30A10Q6XR72 485 aa18.82■□□□□ 0.6
TRIM27-201ENST00000377194 RRAGAQ7L523 313 aa18.82■□□□□ 0.6
TRIM27-201ENST00000377194 CCDC65Q8IXS2 484 aa18.82■□□□□ 0.6
TRIM27-201ENST00000377194 TANGO6Q9C0B7 1094 aa18.82■□□□□ 0.6
TRIM27-201ENST00000377194 PRR12Q9ULL5 1215 aa18.82■□□□□ 0.6
TRIM27-201ENST00000377194 SPDYE3A6NKU9 549 aa18.81■□□□□ 0.6
TRIM27-201ENST00000377194 SREBF1P36956 1147 aa18.81■□□□□ 0.6
TRIM27-201ENST00000377194 CASP5P51878 434 aa18.81■□□□□ 0.6
TRIM27-201ENST00000377194 PABPC4Q13310 644 aaKnown RBP eCLIP18.81■□□□□ 0.61e-8■■■■□ 21.6
TRIM27-201ENST00000377194 Q4G0T1 1027 aa18.81■□□□□ 0.6
TRIM27-201ENST00000377194 RNF187Q5TA31 235 aaPredicted RBP18.81■□□□□ 0.6
TRIM27-201ENST00000377194 CC2D2BQ6DHV5 1058 aa18.81■□□□□ 0.6
TRIM27-201ENST00000377194 FOXR2Q6PJQ5 311 aa18.81■□□□□ 0.6
TRIM27-201ENST00000377194 ACER1Q8TDN7 264 aa18.81■□□□□ 0.6
TRIM27-201ENST00000377194 TBC1D5Q92609 795 aa18.81■□□□□ 0.6
TRIM27-201ENST00000377194 ZKSCAN4Q969J2 545 aaPredicted RBP18.81■□□□□ 0.6
TRIM27-201ENST00000377194 KCTD10Q9H3F6 313 aa18.81■□□□□ 0.6
TRIM27-201ENST00000377194 ZHX3Q9H4I2 956 aa18.81■□□□□ 0.6
TRIM27-201ENST00000377194 BCAS3Q9H6U6 928 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms