RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 GCFC2P16383 781 aaKnown RBP13.63□□□□□ -0.23
TNFSF13B-201ENST00000375887 NR2F2P24468 414 aa13.63□□□□□ -0.23
TNFSF13B-201ENST00000375887 GUCY2FP51841 1108 aa13.63□□□□□ -0.23
TNFSF13B-201ENST00000375887 SPIRE1Q08AE8 756 aa13.63□□□□□ -0.23
TNFSF13B-201ENST00000375887 GLE1Q53GS7 698 aaKnown RBP13.63□□□□□ -0.23
TNFSF13B-201ENST00000375887 ALS2CLQ60I27 953 aa13.63□□□□□ -0.23
TNFSF13B-201ENST00000375887 PCDHA1Q9Y5I3 950 aa13.63□□□□□ -0.23
TNFSF13B-201ENST00000375887 GOLGA8KD6RF30 607 aa13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 GNA14O95837 355 aa13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 MAGEA9P43362 315 aa13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 GNGT1P63211 74 aa13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 TCP10Q12799 353 aa13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 GPATCH4Q5T3I0 446 aaKnown RBP13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 IFT20Q8IY31 132 aa13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 CCDC43Q96MW1 224 aaKnown RBP13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 IKZF4Q9H2S9 585 aa13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 DHX36Q9H2U1 1008 aaKnown RBP13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 DNAJC18Q9H819 358 aa13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 KCNQ5Q9NR82 932 aa13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 TSKSQ9UJT2 592 aa13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 UTRNP46939 3433 aa13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 KDM3AQ9Y4C1 1321 aa13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 MEIS2O14770 477 aa13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 EIF3HO15372 352 aaKnown RBP eCLIP13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 HSF2BPO75031 334 aa13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 PABPC4Q13310 644 aaKnown RBP eCLIP13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 GIT2Q14161 759 aa13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 CDC42EP5Q6NZY7 148 aa13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 PACS2Q86VP3 889 aa13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 RBM46Q8TBY0 533 aaKnown RBP13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 BCAS4Q8TDM0 211 aa13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 ANO3Q9BYT9 981 aa13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 RNF14Q9UBS8 474 aa13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 AJAP1Q9UKB5 411 aaPredicted RBP13.62□□□□□ -0.23
TNFSF13B-201ENST00000375887 RAD51CO43502 376 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 OPA1O60313 960 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 SPATA31C1P0DKV0 1188 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 POLD1P28340 1107 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 HOXA7P31268 230 aaPredicted RBP13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 PDCLQ13371 301 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 ASIC2Q16515 512 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 HDAC9Q9UKV0 1011 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 ARFGEF1Q9Y6D6 1849 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 RSPH10B2B2RC85 870 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 CETN3O15182 167 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 KRT18P05783 430 aaKnown RBP13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 RSPH10BP0C881 870 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 MYBP10242 640 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 UCHL3P15374 230 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 HOXA10P31260 410 aaPredicted RBP13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 ATP1A2P50993 1020 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 DDR1Q08345 913 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 KCNA1Q09470 495 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 NNTQ13423 1086 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 CDC37Q16543 378 aaPredicted RBP13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 PRR16Q569H4 304 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 APOBEC3HQ6NTF7 200 aaKnown RBP13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 KLHL7Q8IXQ5 586 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 ETNPPLQ8TBG4 499 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 CRYGNQ8WXF5 182 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 REEP2Q9BRK0 252 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 SWAP70Q9UH65 585 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 TAF1LQ8IZX4 1826 aa13.61□□□□□ -0.23
TNFSF13B-201ENST00000375887 CYP3A7-CYP3A51PA0A087WV96 503 aa13.6□□□□□ -0.23
TNFSF13B-201ENST00000375887 AKAP3O75969 853 aa13.6□□□□□ -0.23
TNFSF13B-201ENST00000375887 CYP3A7P24462 503 aa13.6□□□□□ -0.23
TNFSF13B-201ENST00000375887 PON1P27169 355 aa13.6□□□□□ -0.23
TNFSF13B-201ENST00000375887 USP11P51784 963 aa13.6□□□□□ -0.23
TNFSF13B-201ENST00000375887 EDRF1Q3B7T1 1238 aa13.6□□□□□ -0.23
TNFSF13B-201ENST00000375887 SFR1Q86XK3 245 aa13.6□□□□□ -0.23
TNFSF13B-201ENST00000375887 USP38Q8NB14 1042 aa13.6□□□□□ -0.23
TNFSF13B-201ENST00000375887 TMEM59LQ9UK28 342 aa13.6□□□□□ -0.23
TNFSF13B-201ENST00000375887 FOCADQ5VW36 1801 aa13.6□□□□□ -0.23
TNFSF13B-201ENST00000375887 FAM86B1E9PN63 330 aa13.6□□□□□ -0.23
TNFSF13B-201ENST00000375887 KCNK3O14649 394 aa13.6□□□□□ -0.23
TNFSF13B-201ENST00000375887 FAM86B2P0C5J1 330 aa13.6□□□□□ -0.23
TNFSF13B-201ENST00000375887 EPS15P42566 896 aa13.6□□□□□ -0.23
TNFSF13B-201ENST00000375887 CASP4P49662 377 aa13.6□□□□□ -0.23
TNFSF13B-201ENST00000375887 GJB7Q6PEY0 223 aa13.6□□□□□ -0.23
TNFSF13B-201ENST00000375887 SIAH1Q8IUQ4 282 aa13.6□□□□□ -0.23
TNFSF13B-201ENST00000375887 CYP2W1Q8TAV3 490 aa13.6□□□□□ -0.23
TNFSF13B-201ENST00000375887 LENG9Q96B70 501 aa13.6□□□□□ -0.23
TNFSF13B-201ENST00000375887 MBOAT7Q96N66 472 aa13.6□□□□□ -0.23
TNFSF13B-201ENST00000375887 SAMM50Q9Y512 469 aa13.6□□□□□ -0.23
TNFSF13B-201ENST00000375887 ZBTB48P10074 688 aaPredicted RBP13.59□□□□□ -0.23
TNFSF13B-201ENST00000375887 EEF2P13639 858 aaKnown RBP13.59□□□□□ -0.23
TNFSF13B-201ENST00000375887 SKOR1P84550 965 aa13.59□□□□□ -0.23
TNFSF13B-201ENST00000375887 ARHGAP4P98171 946 aa13.59□□□□□ -0.23
TNFSF13B-201ENST00000375887 KNOP1Q1ED39 458 aaKnown RBP13.59□□□□□ -0.23
TNFSF13B-201ENST00000375887 EPM2AIP1Q7L775 607 aaPredicted RBP13.59□□□□□ -0.23
TNFSF13B-201ENST00000375887 LRRC57Q8N9N7 239 aa13.59□□□□□ -0.23
TNFSF13B-201ENST00000375887 RUFY1Q96T51 708 aa13.59□□□□□ -0.23
TNFSF13B-201ENST00000375887 LUC7LQ9NQ29 371 aaKnown RBP13.59□□□□□ -0.23
TNFSF13B-201ENST00000375887 ARMCX3Q9UH62 379 aaPredicted RBP13.59□□□□□ -0.23
TNFSF13B-201ENST00000375887 NAGPAQ9UK23 515 aa13.59□□□□□ -0.23
TNFSF13B-201ENST00000375887 TRAF3IP3Q9Y228 551 aa13.59□□□□□ -0.23
TNFSF13B-201ENST00000375887 PITPNM2Q9BZ72 1349 aa13.59□□□□□ -0.23
TNFSF13B-201ENST00000375887 ERVK-9P63128 1117 aa13.59□□□□□ -0.23
TNFSF13B-201ENST00000375887 CYP4A11Q02928 519 aa13.59□□□□□ -0.23
TNFSF13B-201ENST00000375887 PAK2Q13177 524 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms