RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 SRP68Q9UHB9 627 aaKnown RBP18.22■□□□□ 0.51
VARS-215ENST00000375663 ECM2O94769 699 aaPredicted RBP18.22■□□□□ 0.51
VARS-215ENST00000375663 MMEP08473 750 aa18.22■□□□□ 0.51
VARS-215ENST00000375663 MFAP3P55082 362 aa18.22■□□□□ 0.51
VARS-215ENST00000375663 ABCB5Q2M3G0 1257 aa18.22■□□□□ 0.51
VARS-215ENST00000375663 C6orf118Q5T5N4 469 aa18.22■□□□□ 0.51
VARS-215ENST00000375663 SFR1Q86XK3 245 aa18.22■□□□□ 0.51
VARS-215ENST00000375663 CTAGE3PQ8IX95 158 aa18.22■□□□□ 0.51
VARS-215ENST00000375663 RAB20Q9NX57 234 aa18.22■□□□□ 0.51
VARS-215ENST00000375663 POTEB3A0JP26 581 aa18.22■□□□□ 0.51
VARS-215ENST00000375663 POTECB2RU33 542 aa18.22■□□□□ 0.51
VARS-215ENST00000375663 POTEBQ6S5H4 581 aa18.22■□□□□ 0.51
VARS-215ENST00000375663 TBC1D1Q86TI0 1168 aaPredicted RBP18.22■□□□□ 0.51
VARS-215ENST00000375663 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.22■□□□□ 0.51
VARS-215ENST00000375663 LRRC8CQ8TDW0 803 aa18.22■□□□□ 0.51
VARS-215ENST00000375663 TMEM60Q9H2L4 133 aa18.22■□□□□ 0.51
VARS-215ENST00000375663 ZNF446Q9NWS9 450 aa18.22■□□□□ 0.51
VARS-215ENST00000375663 DIP2AQ14689 1571 aa18.22■□□□□ 0.51
VARS-215ENST00000375663 PPP2R2AP63151 447 aa18.22■□□□□ 0.51
VARS-215ENST00000375663 NSUN4Q96CB9 384 aaKnown RBP18.22■□□□□ 0.51
VARS-215ENST00000375663 MXD3Q9BW11 206 aa18.22■□□□□ 0.51
VARS-215ENST00000375663 CPSF2Q9P2I0 782 aaKnown RBP18.22■□□□□ 0.51
VARS-215ENST00000375663 TBK1Q9UHD2 729 aa18.22■□□□□ 0.51
VARS-215ENST00000375663 I3L4J1 428 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 KRT14P02533 472 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 MAPK4P31152 587 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 KLK7P49862 253 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 TROAPQ12815 778 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 ORC2Q13416 577 aaPredicted RBP18.21■□□□□ 0.51
VARS-215ENST00000375663 MUM1Q2TAK8 710 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 TBC1D10BQ4KMP7 808 aaPredicted RBP18.21■□□□□ 0.51
VARS-215ENST00000375663 WDR93Q6P2C0 686 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 NLRX1Q86UT6 975 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 PALM2Q8IXS6 379 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 NACC1Q96RE7 527 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 DNAJC12Q9UKB3 198 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 ADCY2Q08462 1091 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 KAZNQ674X7 775 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 N4BP2L2Q92802 583 aaPredicted RBP18.21■□□□□ 0.51
VARS-215ENST00000375663 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.21■□□□□ 0.511e-6■■■□□ 15.6
VARS-215ENST00000375663 RBM12Q9NTZ6 932 aaKnown RBP18.21■□□□□ 0.51
VARS-215ENST00000375663 PDS5AQ29RF7 1337 aaKnown RBP18.21■□□□□ 0.51
VARS-215ENST00000375663 SSU72P8A0A1W2PR75 194 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 USP17L15C9J2P7 530 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 USP17L13C9JLJ4 530 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 USP17L11C9JVI0 530 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 USP17L18D6R9N7 530 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 USP17L22D6RA61 530 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 USP17L17D6RBQ6 530 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 USP17L19D6RCP7 530 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 USP17L20D6RJB6 530 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 MAN1A1P33908 653 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 HSPA1LP34931 641 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 PEX19P40855 299 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 USP17L24Q0WX57 530 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 USP17L6PQ6QN14 398 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 OTUD6AQ7L8S5 288 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 CNTNAP5Q8WYK1 1306 aa18.21■□□□□ 0.51
VARS-215ENST00000375663 NR3C1P04150 777 aa18.2■□□□□ 0.5
VARS-215ENST00000375663 PTK2Q05397 1052 aa18.2■□□□□ 0.5
VARS-215ENST00000375663 AOC3Q16853 763 aa18.2■□□□□ 0.5
VARS-215ENST00000375663 CCDC93Q567U6 631 aa18.2■□□□□ 0.5
VARS-215ENST00000375663 LGSNQ5TDP6 509 aa18.2■□□□□ 0.5
VARS-215ENST00000375663 NUGGCQ68CJ6 796 aa18.2■□□□□ 0.5
VARS-215ENST00000375663 RUBCNQ92622 972 aa18.2■□□□□ 0.5
VARS-215ENST00000375663 MPHOSPH6Q99547 160 aaKnown RBP18.2■□□□□ 0.5
VARS-215ENST00000375663 BAZ2BQ9UIF8 2168 aaKnown RBP18.2■□□□□ 0.5
VARS-215ENST00000375663 MEFVO15553 781 aaPredicted RBP18.2■□□□□ 0.5
VARS-215ENST00000375663 ACSL3O95573 720 aa18.2■□□□□ 0.5
VARS-215ENST00000375663 ARHGEF18Q6ZSZ5 1173 aa18.2■□□□□ 0.5
VARS-215ENST00000375663 RHOT2Q8IXI1 618 aa18.2■□□□□ 0.5
VARS-215ENST00000375663 ANKRD35Q8N283 1001 aa18.2■□□□□ 0.5
VARS-215ENST00000375663 C7orf25Q9BPX7 421 aa18.2■□□□□ 0.5
VARS-215ENST00000375663 SPZ1Q9BXG8 430 aa18.2■□□□□ 0.5
VARS-215ENST00000375663 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.2■□□□□ 0.5
VARS-215ENST00000375663 FBXL5Q9UKA1 691 aa18.2■□□□□ 0.5
VARS-215ENST00000375663 LRRIQ3A6PVS8 624 aaPredicted RBP18.2■□□□□ 0.5
VARS-215ENST00000375663 NDC80O14777 642 aa18.2■□□□□ 0.5
VARS-215ENST00000375663 SASH3O75995 380 aa18.2■□□□□ 0.5
VARS-215ENST00000375663 MXI1P50539 228 aa18.2■□□□□ 0.5
VARS-215ENST00000375663 CDC37Q16543 378 aaPredicted RBP18.2■□□□□ 0.5
VARS-215ENST00000375663 C12orf60Q5U649 245 aa18.2■□□□□ 0.5
VARS-215ENST00000375663 CDKAL1Q5VV42 579 aa18.2■□□□□ 0.5
VARS-215ENST00000375663 TMED8Q6PL24 325 aaPredicted RBP18.2■□□□□ 0.5
VARS-215ENST00000375663 TRAPPC11Q7Z392 1133 aa18.2■□□□□ 0.5
VARS-215ENST00000375663 TESPA1A2RU30 521 aaPredicted RBP18.19■□□□□ 0.5
VARS-215ENST00000375663 POMGNT1Q8WZA1 660 aa18.19■□□□□ 0.5
VARS-215ENST00000375663 ZNF577Q9BSK1 485 aa18.19■□□□□ 0.5
VARS-215ENST00000375663 DNAJC17Q9NVM6 304 aaKnown RBP18.19■□□□□ 0.5
VARS-215ENST00000375663 AMACRQ9UHK6 382 aa18.19■□□□□ 0.5
VARS-215ENST00000375663 ANAPC5Q9UJX4 755 aa18.19■□□□□ 0.5
VARS-215ENST00000375663 SESN3P58005 492 aa18.19■□□□□ 0.5
VARS-215ENST00000375663 RSAD2Q8WXG1 361 aa18.19■□□□□ 0.5
VARS-215ENST00000375663 WDR11Q9BZH6 1224 aa18.19■□□□□ 0.5
VARS-215ENST00000375663 ANKZF1Q9H8Y5 726 aa18.19■□□□□ 0.5
VARS-215ENST00000375663 KCND1Q9NSA2 647 aa18.19■□□□□ 0.5
VARS-215ENST00000375663 DAPK3O43293 454 aa18.19■□□□□ 0.5
VARS-215ENST00000375663 ALAS1P13196 640 aa18.19■□□□□ 0.5
VARS-215ENST00000375663 SARNPP82979 210 aaKnown RBP18.19■□□□□ 0.5
VARS-215ENST00000375663 BFSP1Q12934 665 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms