RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 SMTNP53814 917 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 CCDC149Q6ZUS6 474 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 NRSN1Q8IZ57 195 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 ZNF845Q96IR2 970 aaPredicted RBP9.93□□□□□ -0.82
UBR4-201ENST00000375218 IL25Q9H293 177 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 PHAXQ9H814 394 aaKnown RBP9.93□□□□□ -0.82
UBR4-201ENST00000375218 WDR35Q9P2L0 1181 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 CCDC39Q9UFE4 941 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 ZNF112Q9UJU3 913 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 POLR3GO15318 223 aaPredicted RBP9.93□□□□□ -0.82
UBR4-201ENST00000375218 KDM1AO60341 852 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 APBB3O95704 486 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 EHHADHQ08426 723 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 COL9A2Q14055 689 aaPredicted RBP9.93□□□□□ -0.82
UBR4-201ENST00000375218 NAA16Q6N069 864 aaPredicted RBP9.93□□□□□ -0.82
UBR4-201ENST00000375218 ANKRD35Q8N283 1001 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 MAML1Q92585 1016 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 RUNDC3BQ96NL0 473 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 RUFY1Q96T51 708 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 KCNQ5Q9NR82 932 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 MAP3K5Q99683 1374 aa9.93□□□□□ -0.82
UBR4-201ENST00000375218 USP8P40818 1118 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 MNAT1P51948 309 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 PURAQ00577 322 aaKnown RBP9.92□□□□□ -0.82
UBR4-201ENST00000375218 TNIP1Q15025 636 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 HSP90AA5PQ58FG0 334 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 NKAIN3Q8N8D7 197 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 WHAMMQ8TF30 809 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 FNBP1Q96RU3 617 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 TRIM5Q9C035 493 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 FBRSQ9HAH7 460 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 TMEM260Q9NX78 707 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 CLTBP09497 229 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 MX2P20592 715 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 OSBPP22059 807 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 EPS15P42566 896 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 TTC31Q49AM3 519 aaPredicted RBP9.92□□□□□ -0.82
UBR4-201ENST00000375218 SPDYCQ5MJ68 293 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 CCDC183Q5T5S1 534 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 ISLR2Q6UXK2 745 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 CCDC81Q6ZN84 652 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 TCEAL8Q8IYN2 117 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 IL17RDQ8NFM7 739 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 ATXN2LQ8WWM7 1075 aaKnown RBP9.92□□□□□ -0.82
UBR4-201ENST00000375218 DPF3Q92784 378 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 CDC23Q9UJX2 597 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 KCNQ2O43526 872 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 C6orf222P0C671 652 aaPredicted RBP9.92□□□□□ -0.82
UBR4-201ENST00000375218 DDIT3P35638 169 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 FKBP4Q02790 459 aaKnown RBP eCLIP9.92□□□□□ -0.82
UBR4-201ENST00000375218 HSP90AA4PQ58FG1 418 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 DACT2Q5SW24 774 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 MYCT1Q8N699 235 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 UQCC2Q9BRT2 126 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 AKAP11Q9UKA4 1901 aa9.92□□□□□ -0.82
UBR4-201ENST00000375218 LARGE1O95461 756 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 MAGEA10P43363 369 aaPredicted RBP9.91□□□□□ -0.82
UBR4-201ENST00000375218 PTGDRQ13258 359 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.91□□□□□ -0.82
UBR4-201ENST00000375218 FBXO22Q8NEZ5 403 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 VCPKMTQ9H867 229 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 OGFRQ9NZT2 677 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 SLC30A1Q9Y6M5 507 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 AK9Q5TCS8 1911 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 FAM196BA6NMK8 535 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 M0R3H8 397 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 TNFRSF21O75509 655 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 TADA3O75528 432 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 SKAP2O75563 359 aaPredicted RBP9.91□□□□□ -0.82
UBR4-201ENST00000375218 PHKA1P46020 1223 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 SULT1E1P49888 294 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 MPP1Q00013 466 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 MTX1Q13505 466 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 PSMD6Q15008 389 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 HS1BP3Q53T59 392 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 FASTKD5Q7L8L6 764 aaKnown RBP9.91□□□□□ -0.82
UBR4-201ENST00000375218 SLC9B2Q86UD5 537 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 LUZP1Q86V48 1076 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 VSIG1Q86XK7 387 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 PLD6Q8N2A8 252 aaKnown RBP9.91□□□□□ -0.82
UBR4-201ENST00000375218 DNAAF4Q8WXU2 420 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 ELAC1Q9H777 363 aaKnown RBP9.91□□□□□ -0.82
UBR4-201ENST00000375218 ZC3H7BQ9UGR2 993 aaKnown RBP9.91□□□□□ -0.82
UBR4-201ENST00000375218 NOD1Q9Y239 953 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 CDC25CP30307 473 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 GBP2P32456 591 aaPredicted RBP9.91□□□□□ -0.82
UBR4-201ENST00000375218 HSD17B2P37059 387 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 EIF4A1P60842 406 aaKnown RBP9.91□□□□□ -0.82
UBR4-201ENST00000375218 SLC6A19Q695T7 634 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 MCTP1Q6DN14 999 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 TTLL5Q6EMB2 1281 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 ARHGAP11AQ6P4F7 1023 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 KDELC2Q7Z4H8 507 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 NAXEQ8NCW5 288 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 OTUD7AQ8TE49 926 aaPredicted RBP9.91□□□□□ -0.82
UBR4-201ENST00000375218 SHC3Q92529 594 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 FOXP3Q9BZS1 431 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.91□□□□□ -0.82
UBR4-201ENST00000375218 PDP2Q9P2J9 529 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 LAMA4Q16363 1823 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms