RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 DPYDQ12882 1025 aa19.26■□□□□ 0.67
HLA-DMA-201ENST00000374843 PNOCQ13519 176 aa19.26■□□□□ 0.67
HLA-DMA-201ENST00000374843 MIS18BP1Q6P0N0 1132 aa19.26■□□□□ 0.67
HLA-DMA-201ENST00000374843 CKAP2LQ8IYA6 745 aa19.26■□□□□ 0.67
HLA-DMA-201ENST00000374843 GRAMD1CQ8IYS0 662 aa19.26■□□□□ 0.67
HLA-DMA-201ENST00000374843 CD99L2Q8TCZ2 262 aa19.26■□□□□ 0.67
HLA-DMA-201ENST00000374843 WRAP73Q9P2S5 460 aaPredicted RBP19.26■□□□□ 0.67
HLA-DMA-201ENST00000374843 SRRDQ9UH36 339 aa19.26■□□□□ 0.67
HLA-DMA-201ENST00000374843 EYA4O95677 639 aa19.25■□□□□ 0.67
HLA-DMA-201ENST00000374843 SARSP49591 514 aaKnown RBP19.25■□□□□ 0.67
HLA-DMA-201ENST00000374843 PSMC5P62195 406 aa19.25■□□□□ 0.67
HLA-DMA-201ENST00000374843 CTTNQ14247 550 aaKnown RBP19.25■□□□□ 0.67
HLA-DMA-201ENST00000374843 UGCGQ16739 394 aa19.25■□□□□ 0.67
HLA-DMA-201ENST00000374843 DUSP28Q4G0W2 176 aa19.25■□□□□ 0.67
HLA-DMA-201ENST00000374843 IQSEC1Q6DN90 963 aa19.25■□□□□ 0.67
HLA-DMA-201ENST00000374843 LRSAM1Q6UWE0 723 aa19.25■□□□□ 0.67
HLA-DMA-201ENST00000374843 SV2BQ7L1I2 683 aa19.25■□□□□ 0.67
HLA-DMA-201ENST00000374843 C4orf19Q8IY42 314 aa19.25■□□□□ 0.67
HLA-DMA-201ENST00000374843 BANK1Q8NDB2 785 aa19.25■□□□□ 0.67
HLA-DMA-201ENST00000374843 ATP6V0A1Q93050 837 aa19.25■□□□□ 0.67
HLA-DMA-201ENST00000374843 C7orf25Q9BPX7 421 aa19.25■□□□□ 0.67
HLA-DMA-201ENST00000374843 ZHX1Q9UKY1 873 aaPredicted RBP19.25■□□□□ 0.67
HLA-DMA-201ENST00000374843 DNM3Q9UQ16 869 aa19.25■□□□□ 0.67
HLA-DMA-201ENST00000374843 TELO2Q9Y4R8 837 aa19.25■□□□□ 0.67
HLA-DMA-201ENST00000374843 SAMM50Q9Y512 469 aa19.25■□□□□ 0.67
HLA-DMA-201ENST00000374843 GSTTP1A0A1W2PQM5 241 aa19.24■□□□□ 0.67
HLA-DMA-201ENST00000374843 E9PMD0 336 aa19.24■□□□□ 0.67
HLA-DMA-201ENST00000374843 DKC1O60832 514 aaKnown RBP eCLIP19.24■□□□□ 0.67
HLA-DMA-201ENST00000374843 GH1P01241 217 aa19.24■□□□□ 0.67
HLA-DMA-201ENST00000374843 PLA2G4BP0C869 781 aa19.24■□□□□ 0.67
HLA-DMA-201ENST00000374843 HOXD10P28358 340 aa19.24■□□□□ 0.67
HLA-DMA-201ENST00000374843 CYP2C19P33261 490 aa19.24■□□□□ 0.67
HLA-DMA-201ENST00000374843 ADCYAP1R1P41586 468 aa19.24■□□□□ 0.67
HLA-DMA-201ENST00000374843 SLC12A3P55017 1021 aa19.24■□□□□ 0.67
HLA-DMA-201ENST00000374843 AMPD3Q01432 767 aa19.24■□□□□ 0.67
HLA-DMA-201ENST00000374843 LAMC2Q13753 1193 aa19.24■□□□□ 0.67
HLA-DMA-201ENST00000374843 MCM6Q14566 821 aa19.24■□□□□ 0.67
HLA-DMA-201ENST00000374843 TPH2Q8IWU9 490 aa19.24■□□□□ 0.67
HLA-DMA-201ENST00000374843 ZNF296Q8WUU4 475 aaPredicted RBP19.24■□□□□ 0.67
HLA-DMA-201ENST00000374843 TRIB2Q92519 343 aa19.24■□□□□ 0.67
HLA-DMA-201ENST00000374843 NACC1Q96RE7 527 aa19.24■□□□□ 0.67
HLA-DMA-201ENST00000374843 GPR20Q99678 358 aa19.24■□□□□ 0.67
HLA-DMA-201ENST00000374843 TRIM9Q9C026 710 aa19.24■□□□□ 0.67
HLA-DMA-201ENST00000374843 LRRC27Q9C0I9 530 aa19.24■□□□□ 0.67
HLA-DMA-201ENST00000374843 MLXIPQ9HAP2 919 aa19.24■□□□□ 0.67
HLA-DMA-201ENST00000374843 EMSYQ7Z589 1322 aa19.24■□□□□ 0.67
HLA-DMA-201ENST00000374843 LGR5O75473 907 aa19.23■□□□□ 0.67
HLA-DMA-201ENST00000374843 SMC2O95347 1197 aa19.23■□□□□ 0.67
HLA-DMA-201ENST00000374843 XRCC6P12956 609 aaKnown RBP eCLIP19.23■□□□□ 0.67
HLA-DMA-201ENST00000374843 HOXD8P13378 290 aaPredicted RBP19.23■□□□□ 0.67
HLA-DMA-201ENST00000374843 SMPD1P17405 629 aa19.23■□□□□ 0.67
HLA-DMA-201ENST00000374843 AFMP43652 599 aa19.23■□□□□ 0.67
HLA-DMA-201ENST00000374843 PRMT2P55345 433 aa19.23■□□□□ 0.67
HLA-DMA-201ENST00000374843 PSMC6P62333 389 aa19.23■□□□□ 0.67
HLA-DMA-201ENST00000374843 ARHGEF6Q15052 776 aa19.23■□□□□ 0.67
HLA-DMA-201ENST00000374843 CCDC144BQ3MJ40 725 aa19.23■□□□□ 0.67
HLA-DMA-201ENST00000374843 MFSD14CQ5VZR4 134 aa19.23■□□□□ 0.67
HLA-DMA-201ENST00000374843 CCDC60Q8IWA6 550 aaPredicted RBP19.23■□□□□ 0.67
HLA-DMA-201ENST00000374843 DHX37Q8IY37 1157 aaKnown RBP19.23■□□□□ 0.67
HLA-DMA-201ENST00000374843 SYT2Q8N9I0 419 aaPredicted RBP19.23■□□□□ 0.67
HLA-DMA-201ENST00000374843 AFAP1L1Q8TED9 768 aa19.23■□□□□ 0.67
HLA-DMA-201ENST00000374843 SEPT1Q8WYJ6 367 aa19.23■□□□□ 0.67
HLA-DMA-201ENST00000374843 WBP1LQ9NX94 342 aa19.23■□□□□ 0.67
HLA-DMA-201ENST00000374843 DBR1Q9UK59 544 aaKnown RBP19.23■□□□□ 0.67
HLA-DMA-201ENST00000374843 PCDHA5Q9Y5H7 936 aa19.23■□□□□ 0.67
HLA-DMA-201ENST00000374843 WDR81Q562E7 1941 aa19.22■□□□□ 0.67
HLA-DMA-201ENST00000374843 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.22■□□□□ 0.67
HLA-DMA-201ENST00000374843 CCDC192P0DO97 292 aa19.22■□□□□ 0.67
HLA-DMA-201ENST00000374843 CYBAP13498 195 aa19.22■□□□□ 0.67
HLA-DMA-201ENST00000374843 TYRO3Q06418 890 aa19.22■□□□□ 0.67
HLA-DMA-201ENST00000374843 CUL4BQ13620 913 aa19.22■□□□□ 0.67
HLA-DMA-201ENST00000374843 TMEM63BQ5T3F8 832 aa19.22■□□□□ 0.67
HLA-DMA-201ENST00000374843 DNAJC5GQ8N7S2 189 aa19.22■□□□□ 0.67
HLA-DMA-201ENST00000374843 TRIML1Q8N9V2 468 aa19.22■□□□□ 0.67
HLA-DMA-201ENST00000374843 PPTC7Q8NI37 304 aa19.22■□□□□ 0.67
HLA-DMA-201ENST00000374843 ERCC4Q92889 916 aaPredicted RBP19.22■□□□□ 0.67
HLA-DMA-201ENST00000374843 COPS5Q92905 334 aa19.22■□□□□ 0.67
HLA-DMA-201ENST00000374843 SMARCE1Q969G3 411 aa19.22■□□□□ 0.67
HLA-DMA-201ENST00000374843 SPATA33Q96N06 139 aa19.22■□□□□ 0.67
HLA-DMA-201ENST00000374843 GSDMAQ96QA5 445 aa19.22■□□□□ 0.67
HLA-DMA-201ENST00000374843 PCYT2Q99447 389 aa19.22■□□□□ 0.67
HLA-DMA-201ENST00000374843 ANKEF1Q9NU02 776 aa19.22■□□□□ 0.67
HLA-DMA-201ENST00000374843 GABBR1Q9UBS5 961 aa19.22■□□□□ 0.67
HLA-DMA-201ENST00000374843 GNEQ9Y223 722 aaKnown RBP19.22■□□□□ 0.67
HLA-DMA-201ENST00000374843 MAFBQ9Y5Q3 323 aaPredicted RBP19.22■□□□□ 0.67
HLA-DMA-201ENST00000374843 MYMKA6NI61 221 aa19.21■□□□□ 0.67
HLA-DMA-201ENST00000374843 ADCY6O43306 1168 aa19.21■□□□□ 0.67
HLA-DMA-201ENST00000374843 ZNF862O60290 1169 aa19.21■□□□□ 0.67
HLA-DMA-201ENST00000374843 SORBS3O60504 671 aa19.21■□□□□ 0.67
HLA-DMA-201ENST00000374843 STBD1O95210 358 aa19.21■□□□□ 0.67
HLA-DMA-201ENST00000374843 CYP11B2P19099 503 aa19.21■□□□□ 0.67
HLA-DMA-201ENST00000374843 SP4Q02446 784 aa19.21■□□□□ 0.67
HLA-DMA-201ENST00000374843 KCNB1Q14721 858 aa19.21■□□□□ 0.67
HLA-DMA-201ENST00000374843 HSDL1Q3SXM5 330 aa19.21■□□□□ 0.67
HLA-DMA-201ENST00000374843 STAMQ92783 540 aa19.21■□□□□ 0.67
HLA-DMA-201ENST00000374843 BEGAINQ9BUH8 593 aa19.21■□□□□ 0.67
HLA-DMA-201ENST00000374843 KCND2Q9NZV8 630 aa19.21■□□□□ 0.67
HLA-DMA-201ENST00000374843 MAN1B1Q9UKM7 699 aa19.21■□□□□ 0.67
HLA-DMA-201ENST00000374843 NOP56O00567 594 aaKnown RBP19.2■□□□□ 0.66
HLA-DMA-201ENST00000374843 KLRC4O43908 158 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms