RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 PLCG2P16885 1265 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 FECHP22830 423 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 RAD52P43351 418 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 MVPQ14764 893 aaKnown RBP8.67□□□□□ -1.02
USP48-203ENST00000374732 RAB3GAP1Q15042 981 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 ANKDD1AQ495B1 522 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 BEND6Q5SZJ8 279 aaPredicted RBP8.67□□□□□ -1.02
USP48-203ENST00000374732 PCNX4Q63HM2 1172 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 PDE12Q6L8Q7 609 aaKnown RBP8.67□□□□□ -1.02
USP48-203ENST00000374732 ATG9AQ7Z3C6 839 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 SNX27Q96L92 541 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 VPS37BQ9H9H4 285 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 SLC4A7Q9Y6M7 1214 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 A0A1W2PQ67 120 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 FAM170AA1A519 330 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 TMCC2O75069 709 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 ZNF76P36508 570 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 C8orf34Q49A92 452 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 SLC45A4Q5BKX6 768 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 LPCAT2Q7L5N7 544 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 SLC13A1Q9BZW2 595 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 XAB2Q9HCS7 855 aaKnown RBP8.67□□□□□ -1.02
USP48-203ENST00000374732 EFR3BQ9Y2G0 817 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 NPHP3Q7Z494 1330 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 DGKIO75912 1065 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 MAP3K6O95382 1288 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 SLC3A2P08195 630 aaKnown RBP8.66□□□□□ -1.02
USP48-203ENST00000374732 GCLCP48506 637 aaPredicted RBP8.66□□□□□ -1.02
USP48-203ENST00000374732 PHEXP78562 749 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 ROR2Q01974 943 aaKnown RBP8.66□□□□□ -1.02
USP48-203ENST00000374732 ARID5AQ03989 594 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 SSPNQ14714 243 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 ARHGAP11AQ6P4F7 1023 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 CEP128Q6ZU80 1094 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 CCDC83Q8IWF9 413 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 UBR7Q8N806 425 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 GDAP1Q8TB36 358 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 FNIP1Q8TF40 1166 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 HERVK_113Q902F9 699 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 GMCL1Q96IK5 515 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 L3MBTL3Q96JM7 780 aaPredicted RBP8.66□□□□□ -1.02
USP48-203ENST00000374732 CNDP2Q96KP4 475 aaKnown RBP8.66□□□□□ -1.02
USP48-203ENST00000374732 MALT1Q9UDY8 824 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 MTRF1LQ9UGC7 380 aaKnown RBP8.66□□□□□ -1.02
USP48-203ENST00000374732 EXOC7Q9UPT5 735 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.66□□□□□ -1.02
USP48-203ENST00000374732 E2F3O00716 465 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 IVLP07476 585 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 TROVE2P10155 538 aaKnown RBP eCLIP8.66□□□□□ -1.02
USP48-203ENST00000374732 ZNF3P17036 446 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 CAPN3P20807 821 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 ACY1Q03154 408 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 EXOSC9Q06265 439 aaKnown RBP8.66□□□□□ -1.02
USP48-203ENST00000374732 TRIM14Q14142 442 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 SH3D19Q5HYK7 790 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 HABP4Q5JVS0 413 aaKnown RBP8.66□□□□□ -1.02
USP48-203ENST00000374732 GKAP1Q5VSY0 366 aaPredicted RBP8.66□□□□□ -1.02
USP48-203ENST00000374732 GALNT13Q8IUC8 556 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 TRIM22Q8IYM9 498 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 KIRREL3Q8IZU9 778 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 OR6C4Q8NGE1 309 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 DYDC1Q8WWB3 177 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 NXPE3Q969Y0 559 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 NRBF2Q96F24 287 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 MMRN2Q9H8L6 949 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 HESX1Q9UBX0 185 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 WNK3Q9BYP7 1800 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 USP31Q70CQ4 1352 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 PRR36Q9H6K5 1346 aa8.66□□□□□ -1.02
USP48-203ENST00000374732 SSH2Q76I76 1423 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 ESYT3A0FGR9 886 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 GOLGA8JA6NMD2 632 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 GOLGA8TH3BQL2 631 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 OLFM2O95897 454 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 MT-ND3P03897 115 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 GOLGA8HP0CJ92 632 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 MAPK9P45984 424 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 BLVRAP53004 296 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 PPP2R3AQ06190 1150 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 CUL3Q13618 768 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 SAFBQ15424 915 aaKnown RBP eCLIP8.65□□□□□ -1.022e-6■■■■□ 20.7
USP48-203ENST00000374732 CEP78Q5JTW2 689 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 OTOP3Q7RTS5 596 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 CD93Q9NPY3 652 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 ZNF277Q9NRM2 450 aaPredicted RBP8.65□□□□□ -1.02
USP48-203ENST00000374732 AIPL1Q9NZN9 384 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 PARP4Q9UKK3 1724 aaKnown RBP8.65□□□□□ -1.02
USP48-203ENST00000374732 OVOS2A0A0J9YW53 1432 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 OVOS2Q6IE36 1432 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 A0A1B0GVG6 124 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 AKAP10O43572 662 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 NCK2O43639 380 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 STX6O43752 255 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 ADAMTS4O75173 837 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 CHMP4BP1P59074 171 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 TCIRG1Q13488 830 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 PPP1R21Q6ZMI0 780 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 NME9Q86XW9 330 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 FAM26EQ8N5C1 309 aa8.65□□□□□ -1.02
USP48-203ENST00000374732 ENAHQ8N8S7 591 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms