RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.17■□□□□ 0.82
RXRB-202ENST00000374685 CYLC1P35663 651 aaPredicted RBP20.17■□□□□ 0.82
RXRB-202ENST00000374685 MOXD1Q6UVY6 613 aa20.17■□□□□ 0.82
RXRB-202ENST00000374685 NEK11Q8NG66 645 aa20.17■□□□□ 0.82
RXRB-202ENST00000374685 RANBP17Q9H2T7 1088 aaKnown RBP20.17■□□□□ 0.82
RXRB-202ENST00000374685 PCNTO95613 3336 aa20.17■□□□□ 0.82
RXRB-202ENST00000374685 AKR1B10O60218 316 aa20.17■□□□□ 0.82
RXRB-202ENST00000374685 SYT2Q8N9I0 419 aaPredicted RBP20.17■□□□□ 0.82
RXRB-202ENST00000374685 IL31RAQ8NI17 732 aa20.17■□□□□ 0.82
RXRB-202ENST00000374685 LSM14BQ9BX40 385 aaKnown RBP20.17■□□□□ 0.82
RXRB-202ENST00000374685 SH2D4AQ9H788 454 aa20.17■□□□□ 0.82
RXRB-202ENST00000374685 SAMM50Q9Y512 469 aa20.17■□□□□ 0.82
RXRB-202ENST00000374685 EFCAB8A8MWE9 144 aa20.16■□□□□ 0.82
RXRB-202ENST00000374685 NFKBIEO00221 500 aa20.16■□□□□ 0.82
RXRB-202ENST00000374685 MTMR2Q13614 643 aa20.16■□□□□ 0.82
RXRB-202ENST00000374685 ZCWPW2Q504Y3 356 aa20.16■□□□□ 0.82
RXRB-202ENST00000374685 CEP55Q53EZ4 464 aa20.16■□□□□ 0.82
RXRB-202ENST00000374685 ZC2HC1CQ53FD0 456 aaPredicted RBP20.16■□□□□ 0.82
RXRB-202ENST00000374685 MYCT1Q8N699 235 aa20.16■□□□□ 0.82
RXRB-202ENST00000374685 H2AFXP16104 143 aaPredicted RBP20.16■□□□□ 0.82
RXRB-202ENST00000374685 NMT1P30419 496 aaKnown RBP20.16■□□□□ 0.82
RXRB-202ENST00000374685 EIF4A3P38919 411 aaKnown RBP20.16■□□□□ 0.82
RXRB-202ENST00000374685 GMPSP49915 693 aaPredicted RBP20.16■□□□□ 0.82
RXRB-202ENST00000374685 CHMP4BP1P59074 171 aa20.16■□□□□ 0.82
RXRB-202ENST00000374685 POLR2FP61218 127 aaKnown RBP20.16■□□□□ 0.82
RXRB-202ENST00000374685 COBLL1Q53SF7 1204 aa20.16■□□□□ 0.82
RXRB-202ENST00000374685 OTOP1Q7RTM1 612 aa20.16■□□□□ 0.82
RXRB-202ENST00000374685 COL20A1Q9P218 1284 aa20.16■□□□□ 0.82
RXRB-202ENST00000374685 ARHGAP20Q9P2F6 1191 aa20.16■□□□□ 0.82
RXRB-202ENST00000374685 CTDP1Q9Y5B0 961 aaPredicted RBP20.16■□□□□ 0.82
RXRB-202ENST00000374685 TBX3O15119 743 aa20.15■□□□□ 0.82
RXRB-202ENST00000374685 RHOXF2BP0C7M4 288 aa20.15■□□□□ 0.82
RXRB-202ENST00000374685 EIF2AK2P19525 551 aaKnown RBP20.15■□□□□ 0.82
RXRB-202ENST00000374685 CIITAP33076 1130 aa20.15■□□□□ 0.82
RXRB-202ENST00000374685 MMP14P50281 582 aa20.15■□□□□ 0.82
RXRB-202ENST00000374685 NBPF12Q5TAG4 269 aaPredicted RBP20.15■□□□□ 0.82
RXRB-202ENST00000374685 FAM83AQ86UY5 434 aa20.15■□□□□ 0.82
RXRB-202ENST00000374685 RHOXF2Q9BQY4 288 aa20.15■□□□□ 0.82
RXRB-202ENST00000374685 WRAP73Q9P2S5 460 aaPredicted RBP20.15■□□□□ 0.82
RXRB-202ENST00000374685 PIK3CDO00329 1044 aa20.15■□□□□ 0.82
RXRB-202ENST00000374685 SLITRK3O94933 977 aa20.15■□□□□ 0.82
RXRB-202ENST00000374685 NOP2P46087 812 aaKnown RBP20.15■□□□□ 0.82
RXRB-202ENST00000374685 SPA17Q15506 151 aa20.15■□□□□ 0.82
RXRB-202ENST00000374685 GRIPAP1Q4V328 841 aa20.15■□□□□ 0.82
RXRB-202ENST00000374685 SECISBP2LQ93073 1101 aaKnown RBP20.15■□□□□ 0.82
RXRB-202ENST00000374685 PSMB7Q99436 277 aa20.15■□□□□ 0.82
RXRB-202ENST00000374685 WDR11Q9BZH6 1224 aa20.15■□□□□ 0.82
RXRB-202ENST00000374685 RASSF4Q9H2L5 321 aa20.15■□□□□ 0.82
RXRB-202ENST00000374685 FEM1BQ9UK73 627 aa20.15■□□□□ 0.82
RXRB-202ENST00000374685 PCDHB13Q9Y5F0 798 aa20.15■□□□□ 0.82
RXRB-202ENST00000374685 FAM13AO94988 1023 aa20.14■□□□□ 0.82
RXRB-202ENST00000374685 KCNMA1Q12791 1236 aa20.14■□□□□ 0.82
RXRB-202ENST00000374685 RETREG2Q8NC44 543 aa20.14■□□□□ 0.82
RXRB-202ENST00000374685 ZKSCAN4Q969J2 545 aaPredicted RBP20.14■□□□□ 0.82
RXRB-202ENST00000374685 KCTD10Q9H3F6 313 aa20.14■□□□□ 0.82
RXRB-202ENST00000374685 UNC45AQ9H3U1 944 aa20.14■□□□□ 0.82
RXRB-202ENST00000374685 CDC23Q9UJX2 597 aa20.14■□□□□ 0.82
RXRB-202ENST00000374685 ZNF263O14978 683 aa20.14■□□□□ 0.81
RXRB-202ENST00000374685 CETN3O15182 167 aa20.14■□□□□ 0.81
RXRB-202ENST00000374685 MYCLP12524 364 aaPredicted RBP20.14■□□□□ 0.81
RXRB-202ENST00000374685 ACTN1P12814 892 aa20.14■□□□□ 0.81
RXRB-202ENST00000374685 TNNT3P45378 269 aaPredicted RBP20.14■□□□□ 0.81
RXRB-202ENST00000374685 KRT83P78385 493 aa20.14■□□□□ 0.81
RXRB-202ENST00000374685 MEA1Q16626 185 aa20.14■□□□□ 0.81
RXRB-202ENST00000374685 NSMFQ6X4W1 530 aa20.14■□□□□ 0.81
RXRB-202ENST00000374685 HACL1Q9UJ83 578 aa20.14■□□□□ 0.81
RXRB-202ENST00000374685 FHOD1Q9Y613 1164 aa20.14■□□□□ 0.81
RXRB-202ENST00000374685 IPO5O00410 1097 aaKnown RBP20.13■□□□□ 0.81
RXRB-202ENST00000374685 SORBS3O60504 671 aa20.13■□□□□ 0.81
RXRB-202ENST00000374685 CASP4P49662 377 aa20.13■□□□□ 0.81
RXRB-202ENST00000374685 DNA2P51530 1060 aa20.13■□□□□ 0.81
RXRB-202ENST00000374685 SPP2Q13103 211 aa20.13■□□□□ 0.81
RXRB-202ENST00000374685 R3HDM1Q15032 1099 aaKnown RBP20.13■□□□□ 0.81
RXRB-202ENST00000374685 MCTP2Q6DN12 878 aa20.13■□□□□ 0.81
RXRB-202ENST00000374685 RINT1Q6NUQ1 792 aa20.13■□□□□ 0.81
RXRB-202ENST00000374685 DEFB129Q9H1M3 183 aa20.13■□□□□ 0.81
RXRB-202ENST00000374685 RSPH14Q9UHP6 348 aa20.13■□□□□ 0.81
RXRB-202ENST00000374685 ATP1A1P05023 1023 aaKnown RBP20.13■□□□□ 0.81
RXRB-202ENST00000374685 GFPT1Q06210 699 aaPredicted RBP20.13■□□□□ 0.81
RXRB-202ENST00000374685 RAPGEF1Q13905 1077 aa20.13■□□□□ 0.81
RXRB-202ENST00000374685 FAM160B2Q86V87 743 aa20.13■□□□□ 0.81
RXRB-202ENST00000374685 TXLNBQ8N3L3 684 aa20.13■□□□□ 0.81
RXRB-202ENST00000374685 GOLGA1Q92805 767 aa20.13■□□□□ 0.81
RXRB-202ENST00000374685 CNOT7Q9UIV1 285 aaKnown RBP20.13■□□□□ 0.81
RXRB-202ENST00000374685 PHF20L1A8MW92 1017 aa20.12■□□□□ 0.81
RXRB-202ENST00000374685 PSMD10O75832 226 aa20.12■□□□□ 0.81
RXRB-202ENST00000374685 HOXD13P35453 343 aa20.12■□□□□ 0.81
RXRB-202ENST00000374685 KIF11P52732 1056 aa20.12■□□□□ 0.81
RXRB-202ENST00000374685 NAP1L1P55209 391 aaKnown RBP20.12■□□□□ 0.81
RXRB-202ENST00000374685 WNK4Q96J92 1243 aa20.12■□□□□ 0.81
RXRB-202ENST00000374685 HINFPQ9BQA5 517 aa20.12■□□□□ 0.81
RXRB-202ENST00000374685 IFIH1Q9BYX4 1025 aaKnown RBP20.12■□□□□ 0.81
RXRB-202ENST00000374685 MLXIPQ9HAP2 919 aa20.12■□□□□ 0.81
RXRB-202ENST00000374685 TMEM150BA6NC51 233 aa20.12■□□□□ 0.81
RXRB-202ENST00000374685 KRT86O43790 486 aa20.12■□□□□ 0.81
RXRB-202ENST00000374685 CYP3A4P08684 503 aa20.12■□□□□ 0.81
RXRB-202ENST00000374685 ITGB5P18084 799 aa20.12■□□□□ 0.81
RXRB-202ENST00000374685 KNOP1Q1ED39 458 aaKnown RBP20.12■□□□□ 0.81
RXRB-202ENST00000374685 HAUS4Q9H6D7 363 aa20.12■□□□□ 0.81
RXRB-202ENST00000374685 KCNH2Q12809 1159 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms