RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 DDX39AO00148 427 aaKnown RBP21.67■■□□□ 1.06
HDAC1-201ENST00000373548 DHX15O43143 795 aaKnown RBP21.67■■□□□ 1.06
HDAC1-201ENST00000373548 TBCAO75347 108 aaKnown RBP21.67■■□□□ 1.06
HDAC1-201ENST00000373548 EIF2AK2P19525 551 aaKnown RBP21.67■■□□□ 1.06
HDAC1-201ENST00000373548 PGM5Q15124 567 aa21.67■■□□□ 1.06
HDAC1-201ENST00000373548 FIGNQ5HY92 759 aa21.67■■□□□ 1.06
HDAC1-201ENST00000373548 RNF207Q6ZRF8 634 aa21.67■■□□□ 1.06
HDAC1-201ENST00000373548 PCMTD1Q96MG8 357 aaPredicted RBP21.67■■□□□ 1.06
HDAC1-201ENST00000373548 L2HGDHQ9H9P8 463 aa21.67■■□□□ 1.06
HDAC1-201ENST00000373548 SPON1Q9HCB6 807 aa21.67■■□□□ 1.06
HDAC1-201ENST00000373548 POLD4Q9HCU8 107 aa21.67■■□□□ 1.06
HDAC1-201ENST00000373548 JADE2Q9NQC1 790 aa21.67■■□□□ 1.06
HDAC1-201ENST00000373548 A0A0U1RQJ8 604 aa21.67■■□□□ 1.06
HDAC1-201ENST00000373548 ERCC3P19447 782 aa21.67■■□□□ 1.06
HDAC1-201ENST00000373548 DSG3P32926 999 aa21.67■■□□□ 1.06
HDAC1-201ENST00000373548 HOXD13P35453 343 aa21.67■■□□□ 1.06
HDAC1-201ENST00000373548 RBM10P98175 930 aaKnown RBP21.67■■□□□ 1.06
HDAC1-201ENST00000373548 EDRF1Q3B7T1 1238 aa21.67■■□□□ 1.06
HDAC1-201ENST00000373548 SUPT20HL1Q3ZLR7 823 aa21.67■■□□□ 1.06
HDAC1-201ENST00000373548 WDR59Q6PJI9 974 aa21.67■■□□□ 1.06
HDAC1-201ENST00000373548 NSMFQ6X4W1 530 aa21.67■■□□□ 1.06
HDAC1-201ENST00000373548 PPP4R3CPQ6ZMV5 832 aa21.67■■□□□ 1.06
HDAC1-201ENST00000373548 ACRBPQ8NEB7 543 aa21.67■■□□□ 1.06
HDAC1-201ENST00000373548 ATRIPQ8WXE1 791 aa21.67■■□□□ 1.06
HDAC1-201ENST00000373548 NACC1Q96RE7 527 aa21.67■■□□□ 1.06
HDAC1-201ENST00000373548 AGO4Q9HCK5 861 aaKnown RBP21.67■■□□□ 1.06
HDAC1-201ENST00000373548 RNF146Q9NTX7 359 aa21.67■■□□□ 1.06
HDAC1-201ENST00000373548 ADAMTS5Q9UNA0 930 aa21.67■■□□□ 1.06
HDAC1-201ENST00000373548 WDR90Q96KV7 1748 aa21.66■■□□□ 1.06
HDAC1-201ENST00000373548 DDNO94850 711 aaPredicted RBP21.66■■□□□ 1.06
HDAC1-201ENST00000373548 MYBP10242 640 aa21.66■■□□□ 1.06
HDAC1-201ENST00000373548 ITGB3BPQ13352 177 aaPredicted RBP21.66■■□□□ 1.06
HDAC1-201ENST00000373548 CCDC40Q4G0X9 1142 aa21.66■■□□□ 1.06
HDAC1-201ENST00000373548 LXNQ9BS40 222 aa21.66■■□□□ 1.06
HDAC1-201ENST00000373548 FHDC1Q9C0D6 1143 aaPredicted RBP21.66■■□□□ 1.06
HDAC1-201ENST00000373548 A0A1W2PQJ5 194 aa21.65■■□□□ 1.06
HDAC1-201ENST00000373548 GAP43P17677 238 aa21.65■■□□□ 1.06
HDAC1-201ENST00000373548 ZBED6P86452 979 aa21.65■■□□□ 1.06
HDAC1-201ENST00000373548 BANK1Q8NDB2 785 aa21.65■■□□□ 1.06
HDAC1-201ENST00000373548 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.65■■□□□ 1.062e-7■■■□□ 18.5
HDAC1-201ENST00000373548 PURBQ96QR8 312 aaKnown RBP21.65■■□□□ 1.06
HDAC1-201ENST00000373548 WDR24Q96S15 920 aa21.65■■□□□ 1.06
HDAC1-201ENST00000373548 PXMP2Q9NR77 195 aa21.65■■□□□ 1.06
HDAC1-201ENST00000373548 MARSP56192 900 aaKnown RBP21.65■■□□□ 1.06
HDAC1-201ENST00000373548 GNG11P61952 73 aa21.65■■□□□ 1.06
HDAC1-201ENST00000373548 MTMR1Q13613 665 aa21.65■■□□□ 1.06
HDAC1-201ENST00000373548 PRKG1Q13976 671 aa21.65■■□□□ 1.06
HDAC1-201ENST00000373548 MEA1Q16626 185 aa21.65■■□□□ 1.06
HDAC1-201ENST00000373548 KNOP1Q1ED39 458 aaKnown RBP21.65■■□□□ 1.06
HDAC1-201ENST00000373548 BMT2Q1RMZ1 405 aa21.65■■□□□ 1.06
HDAC1-201ENST00000373548 MIER3Q7Z3K6 550 aa21.65■■□□□ 1.06
HDAC1-201ENST00000373548 NEK9Q8TD19 979 aa21.65■■□□□ 1.06
HDAC1-201ENST00000373548 RMDN3Q96TC7 470 aa21.65■■□□□ 1.06
HDAC1-201ENST00000373548 PDCD2LQ9BRP1 358 aa21.65■■□□□ 1.06
HDAC1-201ENST00000373548 OLFML3Q9NRN5 406 aa21.65■■□□□ 1.06
HDAC1-201ENST00000373548 TRAF3IP3Q9Y228 551 aa21.65■■□□□ 1.06
HDAC1-201ENST00000373548 SFI1A8K8P3 1242 aa21.64■■□□□ 1.06
HDAC1-201ENST00000373548 USP2O75604 605 aaPredicted RBP21.64■■□□□ 1.06
HDAC1-201ENST00000373548 PRPF6O94906 941 aaKnown RBP21.64■■□□□ 1.06
HDAC1-201ENST00000373548 GNA14O95837 355 aa21.64■■□□□ 1.06
HDAC1-201ENST00000373548 COG2Q14746 738 aa21.64■■□□□ 1.06
HDAC1-201ENST00000373548 TSR1Q2NL82 804 aaKnown RBP21.64■■□□□ 1.06
HDAC1-201ENST00000373548 SNRNP48Q6IEG0 339 aaKnown RBP21.64■■□□□ 1.06
HDAC1-201ENST00000373548 ZNF710Q8N1W2 664 aa21.64■■□□□ 1.06
HDAC1-201ENST00000373548 IQCDQ96DY2 449 aa21.64■■□□□ 1.06
HDAC1-201ENST00000373548 LZTFL1Q9NQ48 299 aa21.64■■□□□ 1.06
HDAC1-201ENST00000373548 ZNF215Q9UL58 517 aaPredicted RBP21.64■■□□□ 1.06
HDAC1-201ENST00000373548 ZNF214Q9UL59 606 aaPredicted RBP21.64■■□□□ 1.06
HDAC1-201ENST00000373548 AFG3L2Q9Y4W6 797 aa21.64■■□□□ 1.06
HDAC1-201ENST00000373548 MYH11P35749 1972 aa21.64■■□□□ 1.05
HDAC1-201ENST00000373548 OAZ1P54368 228 aa21.64■■□□□ 1.05
HDAC1-201ENST00000373548 ADAM9Q13443 819 aa21.64■■□□□ 1.05
HDAC1-201ENST00000373548 BAATQ14032 418 aaPredicted RBP21.64■■□□□ 1.05
HDAC1-201ENST00000373548 DLK2Q6UY11 383 aa21.64■■□□□ 1.05
HDAC1-201ENST00000373548 CATSPERGQ6ZRH7 1159 aa21.64■■□□□ 1.05
HDAC1-201ENST00000373548 TRIM59Q8IWR1 403 aa21.64■■□□□ 1.05
HDAC1-201ENST00000373548 EPN1Q9Y6I3 576 aaPredicted RBP21.64■■□□□ 1.05
HDAC1-201ENST00000373548 EPHB6O15197 1021 aa21.63■■□□□ 1.05
HDAC1-201ENST00000373548 FAM13AO94988 1023 aa21.63■■□□□ 1.05
HDAC1-201ENST00000373548 MYCLP12524 364 aaPredicted RBP21.63■■□□□ 1.05
HDAC1-201ENST00000373548 TMOD4Q9NZQ9 345 aa21.63■■□□□ 1.05
HDAC1-201ENST00000373548 NDUFA10O95299 355 aa21.62■■□□□ 1.05
HDAC1-201ENST00000373548 GCNT3O95395 438 aa21.62■■□□□ 1.05
HDAC1-201ENST00000373548 NR2F2P24468 414 aa21.62■■□□□ 1.05
HDAC1-201ENST00000373548 TMEM132BQ14DG7 1078 aa21.62■■□□□ 1.05
HDAC1-201ENST00000373548 IRX2Q9BZI1 471 aaPredicted RBP21.62■■□□□ 1.05
HDAC1-201ENST00000373548 FAM207AQ9NSI2 230 aaPredicted RBP21.62■■□□□ 1.05
HDAC1-201ENST00000373548 PTPRFP10586 1907 aa21.62■■□□□ 1.05
HDAC1-201ENST00000373548 PAPPA2Q9BXP8 1791 aa21.62■■□□□ 1.05
HDAC1-201ENST00000373548 PDXKO00764 312 aa21.62■■□□□ 1.05
HDAC1-201ENST00000373548 CETN3O15182 167 aa21.62■■□□□ 1.05
HDAC1-201ENST00000373548 ARHGEF16Q5VV41 709 aa21.62■■□□□ 1.05
HDAC1-201ENST00000373548 MYCT1Q8N699 235 aa21.62■■□□□ 1.05
HDAC1-201ENST00000373548 CCDC155Q8N6L0 562 aa21.62■■□□□ 1.05
HDAC1-201ENST00000373548 MMRN2Q9H8L6 949 aa21.62■■□□□ 1.05
HDAC1-201ENST00000373548 KCND2Q9NZV8 630 aa21.62■■□□□ 1.05
HDAC1-201ENST00000373548 REXO2Q9Y3B8 237 aaKnown RBP21.62■■□□□ 1.05
HDAC1-201ENST00000373548 SNCAIPQ9Y6H5 919 aa21.62■■□□□ 1.05
HDAC1-201ENST00000373548 OTOFQ9HC10 1997 aa21.61■■□□□ 1.05
HDAC1-201ENST00000373548 SLU7O95391 586 aaKnown RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms