RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 H2AFVQ71UI9 128 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 IRF2BP1Q8IU81 584 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 SPICE1Q8N0Z3 855 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 NSMCE1Q8WV22 266 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 USP40Q9NVE5 1235 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 NOVA2Q9UNW9 492 aaKnown RBP13.19□□□□□ -0.3
NCDN-202ENST00000373243 UTP11Q9Y3A2 253 aaKnown RBP13.19□□□□□ -0.3
NCDN-202ENST00000373243 STXBP3O00186 592 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 SMIM24O75264 130 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 CFBP00751 764 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 SLC8A1P32418 973 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 SLCO1A2P46721 670 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 VPS41P49754 854 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 GLIS3Q8NEA6 775 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 DNAJC7Q99615 494 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 DUSP9Q99956 384 aaKnown RBP13.19□□□□□ -0.3
NCDN-202ENST00000373243 CTTNBP2NLQ9P2B4 639 aa13.19□□□□□ -0.3
NCDN-202ENST00000373243 EPHB6O15197 1021 aa13.18□□□□□ -0.3
NCDN-202ENST00000373243 SETSIPP0DME0 302 aa13.18□□□□□ -0.3
NCDN-202ENST00000373243 RPL13P26373 211 aaKnown RBP13.18□□□□□ -0.3
NCDN-202ENST00000373243 ADCY1Q08828 1119 aa13.18□□□□□ -0.3
NCDN-202ENST00000373243 SPATA20Q8TB22 786 aa13.18□□□□□ -0.3
NCDN-202ENST00000373243 SH2D4AQ9H788 454 aa13.18□□□□□ -0.3
NCDN-202ENST00000373243 TSKSQ9UJT2 592 aa13.18□□□□□ -0.3
NCDN-202ENST00000373243 CAMTA1Q9Y6Y1 1673 aa13.18□□□□□ -0.3
NCDN-202ENST00000373243 GOLGB1Q14789 3259 aaKnown RBP13.18□□□□□ -0.3
NCDN-202ENST00000373243 PLA2G4BP0C869 781 aa13.18□□□□□ -0.3
NCDN-202ENST00000373243 KLRC1P26715 233 aa13.18□□□□□ -0.3
NCDN-202ENST00000373243 ACCSLQ4AC99 568 aa13.18□□□□□ -0.3
NCDN-202ENST00000373243 ALKBH5Q6P6C2 394 aaKnown RBP13.18□□□□□ -0.3
NCDN-202ENST00000373243 INTS5Q6P9B9 1019 aaKnown RBP13.18□□□□□ -0.3
NCDN-202ENST00000373243 EMBQ6PCB8 327 aa13.18□□□□□ -0.3
NCDN-202ENST00000373243 APTXQ7Z2E3 356 aaKnown RBP13.18□□□□□ -0.3
NCDN-202ENST00000373243 ZIM3Q96PE6 472 aa13.18□□□□□ -0.3
NCDN-202ENST00000373243 SEMA6BQ9H3T3 888 aa13.18□□□□□ -0.3
NCDN-202ENST00000373243 CHCHD3Q9NX63 227 aaKnown RBP13.18□□□□□ -0.3
NCDN-202ENST00000373243 MED1Q15648 1581 aaPredicted RBP13.18□□□□□ -0.3
NCDN-202ENST00000373243 MYL1P05976 194 aa13.18□□□□□ -0.3
NCDN-202ENST00000373243 SMTNP53814 917 aa13.18□□□□□ -0.3
NCDN-202ENST00000373243 DHX9Q08211 1270 aaKnown RBP13.18□□□□□ -0.3
NCDN-202ENST00000373243 WDR93Q6P2C0 686 aa13.18□□□□□ -0.3
NCDN-202ENST00000373243 ANAPC4Q9UJX5 808 aa13.18□□□□□ -0.3
NCDN-202ENST00000373243 POTEFA5A3E0 1075 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 SERPING1P05155 500 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 CLTAP09496 248 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 POTEIP0CG38 1075 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 PBX1P40424 430 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 STAT1P42224 750 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 COASYQ13057 564 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 NFIXQ14938 502 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 NAALADL2Q58DX5 795 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 HHATQ5VTY9 493 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 SLC30A9Q6PML9 568 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 POTEGQ6S5H5 508 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 POTEEQ6S8J3 1075 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 PTF1AQ7RTS3 328 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 CCDC50Q8IVM0 306 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 TCP11Q8WWU5 503 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 SHISA4Q96DD7 197 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 IL17RBQ9NRM6 502 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 FSBPO95073 299 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 PLTPP55058 493 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 PPP1R7Q15435 360 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 RUFY4Q6ZNE9 571 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 STK17AQ9UEE5 414 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 HDAC9Q9UKV0 1011 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 TPX2Q9ULW0 747 aaKnown RBP13.17□□□□□ -0.3
NCDN-202ENST00000373243 LRRC10BA6NIK2 292 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 OPLAHO14841 1288 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 CYTH3O43739 400 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 SPOPO43791 374 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 EXOC3O60645 756 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 LGR5O75473 907 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 FUT2Q10981 343 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 KCNH2Q12809 1159 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 ZNF211Q13398 564 aaPredicted RBP13.17□□□□□ -0.3
NCDN-202ENST00000373243 B4GALNT2Q8NHY0 566 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 MTMR8Q96EF0 704 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 PACSIN1Q9BY11 444 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 MAGEF1Q9HAY2 307 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 SH3GLB2Q9NR46 395 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 KBTBD4Q9NVX7 518 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 AMFRQ9UKV5 643 aa13.17□□□□□ -0.3
NCDN-202ENST00000373243 USP17L10C9JJH3 530 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 HOXA13P31271 388 aaPredicted RBP13.16□□□□□ -0.3
NCDN-202ENST00000373243 SP4Q02446 784 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 CETN1Q12798 172 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 MFSD4BQ5TF39 518 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 PAPD7Q5XG87 772 aaKnown RBP13.16□□□□□ -0.3
NCDN-202ENST00000373243 HAUS3Q68CZ6 603 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 KIAA0825Q8IV33 1275 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 NUDT12Q9BQG2 462 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 NT5C3AQ9H0P0 336 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 AMACRQ9UHK6 382 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 MAD2L2Q9UI95 211 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 PLAGL2Q9UPG8 496 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 SLC37A4O43826 429 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 FNTAP49354 379 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 LRRC63Q05C16 580 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 TRIM68Q6AZZ1 485 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms