RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 USP17L1Q7RTZ2 530 aa17.31■□□□□ 0.36
PABPC4-202ENST00000372857 TMC3Q7Z5M5 1100 aa17.31■□□□□ 0.36
PABPC4-202ENST00000372857 CDK5RAP3Q96JB5 506 aa17.31■□□□□ 0.36
PABPC4-202ENST00000372857 TSG101Q99816 390 aa17.31■□□□□ 0.36
PABPC4-202ENST00000372857 ATP8A1Q9Y2Q0 1164 aa17.31■□□□□ 0.36
PABPC4-202ENST00000372857 MYH14Q7Z406 1995 aaKnown RBP17.3■□□□□ 0.36
PABPC4-202ENST00000372857 BUB1BO60566 1050 aaPredicted RBP17.3■□□□□ 0.36
PABPC4-202ENST00000372857 TRIM37O94972 964 aa17.3■□□□□ 0.36
PABPC4-202ENST00000372857 MYO1EQ12965 1108 aa17.3■□□□□ 0.36
PABPC4-202ENST00000372857 NONOQ15233 471 aaKnown RBP eCLIP17.3■□□□□ 0.36
PABPC4-202ENST00000372857 COBLL1Q53SF7 1204 aa17.3■□□□□ 0.36
PABPC4-202ENST00000372857 METTL13Q8N6R0 699 aa17.3■□□□□ 0.36
PABPC4-202ENST00000372857 LARP4BQ92615 738 aaKnown RBP17.3■□□□□ 0.36
PABPC4-202ENST00000372857 THOC1Q96FV9 657 aaKnown RBP17.3■□□□□ 0.36
PABPC4-202ENST00000372857 CHMP6Q96FZ7 201 aa17.3■□□□□ 0.36
PABPC4-202ENST00000372857 ZNF652Q9Y2D9 606 aa17.3■□□□□ 0.36
PABPC4-202ENST00000372857 COL4A3BPQ9Y5P4 624 aa17.3■□□□□ 0.36
PABPC4-202ENST00000372857 SMIM23A6NLE4 172 aa17.3■□□□□ 0.36
PABPC4-202ENST00000372857 NELFCDQ8IXH7 590 aa17.3■□□□□ 0.36
PABPC4-202ENST00000372857 SLC44A5Q8NCS7 719 aa17.3■□□□□ 0.36
PABPC4-202ENST00000372857 MAGEC3Q8TD91 643 aa17.3■□□□□ 0.36
PABPC4-202ENST00000372857 PNMA5Q96PV4 448 aa17.3■□□□□ 0.36
PABPC4-202ENST00000372857 EDEM3Q9BZQ6 932 aa17.3■□□□□ 0.36
PABPC4-202ENST00000372857 UTRNP46939 3433 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 POTEMA6NI47 508 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 PGRMC1O00264 195 aaKnown RBP17.29■□□□□ 0.36
PABPC4-202ENST00000372857 DNAJC8O75937 253 aaPredicted RBP17.29■□□□□ 0.36
PABPC4-202ENST00000372857 PAEPP09466 180 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 USP11P51784 963 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 GRIK5Q16478 980 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 ASIC2Q16515 512 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.29■□□□□ 0.36
PABPC4-202ENST00000372857 DDX12PQ92771 950 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 XPO6Q96QU8 1125 aaKnown RBP17.29■□□□□ 0.36
PABPC4-202ENST00000372857 SELENOSQ9BQE4 189 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 NUDT12Q9BQG2 462 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 TRIM6Q9C030 488 aaPredicted RBP17.29■□□□□ 0.36
PABPC4-202ENST00000372857 KDM4CQ9H3R0 1056 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 MCM9Q9NXL9 1143 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.29■□□□□ 0.361e-13■■□□□ 14.3
PABPC4-202ENST00000372857 L3MBTL1Q9Y468 752 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 ANKRD36CQ5JPF3 1778 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 ABCB11O95342 1321 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 CCT8L1PA6NM43 557 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 PPIP5K2O43314 1243 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 CAND2O75155 1236 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 FAM133BQ5BKY9 247 aaKnown RBP17.29■□□□□ 0.36
PABPC4-202ENST00000372857 KCNK18Q7Z418 384 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 NEK8Q86SG6 692 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 TBC1D1Q86TI0 1168 aaPredicted RBP17.29■□□□□ 0.36
PABPC4-202ENST00000372857 DAGLBQ8NCG7 672 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 CCDC197Q8NCU1 140 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 TBCKQ8TEA7 893 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 CUL5Q93034 780 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 TRIM51Q9BSJ1 452 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 A0A1B0GUL6 1792 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 F8VZ95 297 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 ACTN1P12814 892 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 MTMR3Q13615 1198 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 NAIF1Q69YI7 327 aaPredicted RBP17.29■□□□□ 0.36
PABPC4-202ENST00000372857 FGFBP2Q9BYJ0 223 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 CRNKL1Q9BZJ0 848 aaKnown RBP17.29■□□□□ 0.36
PABPC4-202ENST00000372857 BIN2Q9UBW5 565 aaPredicted RBP17.29■□□□□ 0.36
PABPC4-202ENST00000372857 SAP30BPQ9UHR5 308 aaKnown RBP17.29■□□□□ 0.36
PABPC4-202ENST00000372857 STX8Q9UNK0 236 aa17.29■□□□□ 0.36
PABPC4-202ENST00000372857 RPS8P62241 208 aaKnown RBP17.28■□□□□ 0.36
PABPC4-202ENST00000372857 PTK2Q05397 1052 aa17.28■□□□□ 0.36
PABPC4-202ENST00000372857 GRM4Q14833 912 aa17.28■□□□□ 0.36
PABPC4-202ENST00000372857 ARMC9Q7Z3E5 817 aa17.28■□□□□ 0.36
PABPC4-202ENST00000372857 HOMEZQ8IX15 550 aa17.28■□□□□ 0.36
PABPC4-202ENST00000372857 NSMCE1Q8WV22 266 aa17.28■□□□□ 0.36
PABPC4-202ENST00000372857 NUCKS1Q9H1E3 243 aaKnown RBP17.28■□□□□ 0.36
PABPC4-202ENST00000372857 VAT1LQ9HCJ6 419 aa17.28■□□□□ 0.36
PABPC4-202ENST00000372857 TMEM260Q9NX78 707 aa17.28■□□□□ 0.36
PABPC4-202ENST00000372857 PVALEFA0A1B0GWK0 134 aa17.28■□□□□ 0.36
PABPC4-202ENST00000372857 TLDC2A0PJX2 215 aa17.28■□□□□ 0.36
PABPC4-202ENST00000372857 SMCO2A6NFE2 343 aa17.28■□□□□ 0.36
PABPC4-202ENST00000372857 CDC25CP30307 473 aa17.28■□□□□ 0.36
PABPC4-202ENST00000372857 CCDC63Q8NA47 563 aa17.28■□□□□ 0.36
PABPC4-202ENST00000372857 SYN2Q92777 582 aaPredicted RBP17.28■□□□□ 0.36
PABPC4-202ENST00000372857 NGLY1Q96IV0 654 aa17.28■□□□□ 0.36
PABPC4-202ENST00000372857 GOPCQ9HD26 462 aa17.28■□□□□ 0.36
PABPC4-202ENST00000372857 ANKIB1Q9P2G1 1089 aa17.28■□□□□ 0.36
PABPC4-202ENST00000372857 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.28■□□□□ 0.36
PABPC4-202ENST00000372857 ZNF804BA4D1E1 1349 aa17.27■□□□□ 0.36
PABPC4-202ENST00000372857 SHBGP04278 402 aa17.27■□□□□ 0.36
PABPC4-202ENST00000372857 CHN1P15882 459 aa17.27■□□□□ 0.36
PABPC4-202ENST00000372857 FKBP3Q00688 224 aaKnown RBP17.27■□□□□ 0.36
PABPC4-202ENST00000372857 ERMARDQ5T6L9 678 aa17.27■□□□□ 0.36
PABPC4-202ENST00000372857 ADAT2Q7Z6V5 191 aaKnown RBP17.27■□□□□ 0.36
PABPC4-202ENST00000372857 MYOCDQ8IZQ8 938 aa17.27■□□□□ 0.36
PABPC4-202ENST00000372857 ACTRT1Q8TDG2 376 aa17.27■□□□□ 0.36
PABPC4-202ENST00000372857 ZNF526Q8TF50 670 aaPredicted RBP17.27■□□□□ 0.36
PABPC4-202ENST00000372857 NSUN4Q96CB9 384 aaKnown RBP17.27■□□□□ 0.36
PABPC4-202ENST00000372857 PBKQ96KB5 322 aa17.27■□□□□ 0.36
PABPC4-202ENST00000372857 SETDB2Q96T68 719 aa17.27■□□□□ 0.36
PABPC4-202ENST00000372857 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.27■□□□□ 0.362e-7■■■■□ 25
PABPC4-202ENST00000372857 GGT7Q9UJ14 662 aa17.27■□□□□ 0.36
PABPC4-202ENST00000372857 CCDC88AQ3V6T2 1871 aa17.27■□□□□ 0.36
PABPC4-202ENST00000372857 MMEP08473 750 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms