RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 KRT33BQ14525 404 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 BBS9Q3SYG4 887 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 KIFC3Q9BVG8 833 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 YEATS2Q9ULM3 1422 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 GDF11O95390 407 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 LRRC63Q05C16 580 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 DEUP1Q05D60 604 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 KRT39Q6A163 491 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 RHOT2Q8IXI1 618 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 EEF2KMTQ96G04 330 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 ZMYND12Q9H0C1 365 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 MEIS1O00470 390 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 SEC31AO94979 1220 aaKnown RBP12.41□□□□□ -0.42
VCL-202ENST00000372755 LDHAP00338 332 aaKnown RBP12.41□□□□□ -0.42
VCL-202ENST00000372755 EEF1DP29692 281 aaKnown RBP12.41□□□□□ -0.42
VCL-202ENST00000372755 SLC16A2P36021 539 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 PEX19P40855 299 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 PAPOLAP51003 745 aaKnown RBP12.41□□□□□ -0.42
VCL-202ENST00000372755 RWDD2BP57060 319 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 DPCR1Q3MIW9 517 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 PYROXD1Q8WU10 500 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 TRAIPQ9BWF2 469 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 ESRRAP11474 423 aaPredicted RBP12.41□□□□□ -0.42
VCL-202ENST00000372755 CD58P19256 250 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 FAM133BQ5BKY9 247 aaKnown RBP12.41□□□□□ -0.42
VCL-202ENST00000372755 DSTYKQ6XUX3 929 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 SMYD4Q8IYR2 804 aaPredicted RBP12.41□□□□□ -0.42
VCL-202ENST00000372755 CALR3Q96L12 384 aaKnown RBP12.41□□□□□ -0.42
VCL-202ENST00000372755 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.41□□□□□ -0.421e-6■□□□□ 11
VCL-202ENST00000372755 SCHIP1Q9P0W5 487 aaPredicted RBP12.41□□□□□ -0.42
VCL-202ENST00000372755 TEKT2Q9UIF3 430 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 DBNLQ9UJU6 430 aaKnown RBP12.41□□□□□ -0.42
VCL-202ENST00000372755 SH2B2O14492 632 aaPredicted RBP12.41□□□□□ -0.42
VCL-202ENST00000372755 CDC26Q8NHZ8 85 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 DDX17Q92841 729 aaKnown RBP12.41□□□□□ -0.42
VCL-202ENST00000372755 POLR3CQ9BUI4 534 aaPredicted RBP12.41□□□□□ -0.42
VCL-202ENST00000372755 MSTO1Q9BUK6 570 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 ATG3Q9NT62 314 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 SUN2Q9UH99 717 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 TBK1Q9UHD2 729 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 PTPRTO14522 1441 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 DYNLL1P63167 89 aaKnown RBP12.4□□□□□ -0.42
VCL-202ENST00000372755 OCRLQ01968 901 aa12.4□□□□□ -0.42
VCL-202ENST00000372755 PANX2Q96RD6 677 aa12.4□□□□□ -0.42
VCL-202ENST00000372755 FMO2Q99518 471 aa12.4□□□□□ -0.42
VCL-202ENST00000372755 PUS3Q9BZE2 481 aaKnown RBP12.4□□□□□ -0.42
VCL-202ENST00000372755 FNDC3AQ9Y2H6 1198 aaKnown RBP12.4□□□□□ -0.42
VCL-202ENST00000372755 RRP15Q9Y3B9 282 aaKnown RBP12.4□□□□□ -0.42
VCL-202ENST00000372755 DDIT3P35638 169 aa12.4□□□□□ -0.42
VCL-202ENST00000372755 GLE1Q53GS7 698 aaKnown RBP12.4□□□□□ -0.42
VCL-202ENST00000372755 ERICH1Q86X53 443 aa12.4□□□□□ -0.42
VCL-202ENST00000372755 SPATS2LQ9NUQ6 558 aaKnown RBP12.4□□□□□ -0.42
VCL-202ENST00000372755 SRPRBQ9Y5M8 271 aaKnown RBP12.4□□□□□ -0.42
VCL-202ENST00000372755 CFLARO15519 480 aa12.4□□□□□ -0.42
VCL-202ENST00000372755 LINC00301Q8NCQ3 95 aa12.4□□□□□ -0.42
VCL-202ENST00000372755 KLC2Q9H0B6 622 aa12.4□□□□□ -0.42
VCL-202ENST00000372755 ANLNQ9NQW6 1124 aa12.4□□□□□ -0.42
VCL-202ENST00000372755 GINM1Q9NU53 330 aa12.4□□□□□ -0.42
VCL-202ENST00000372755 MAPK13O15264 365 aa12.4□□□□□ -0.42
VCL-202ENST00000372755 HSPA4LO95757 839 aa12.4□□□□□ -0.42
VCL-202ENST00000372755 SLCO1A2P46721 670 aa12.4□□□□□ -0.42
VCL-202ENST00000372755 TRIP13Q15645 432 aaPredicted RBP12.4□□□□□ -0.42
VCL-202ENST00000372755 FAM96AQ9H5X1 160 aa12.4□□□□□ -0.42
VCL-202ENST00000372755 PI4KBQ9UBF8 816 aa12.4□□□□□ -0.42
VCL-202ENST00000372755 A0A087WUV0 522 aaPredicted RBP12.4□□□□□ -0.43
VCL-202ENST00000372755 KRT37O76014 449 aa12.4□□□□□ -0.43
VCL-202ENST00000372755 CYP21A2P08686 494 aa12.4□□□□□ -0.43
VCL-202ENST00000372755 TAF11Q15544 211 aa12.4□□□□□ -0.43
VCL-202ENST00000372755 TBC1D10BQ4KMP7 808 aaPredicted RBP12.4□□□□□ -0.43
VCL-202ENST00000372755 VSTM4Q8IW00 320 aa12.4□□□□□ -0.43
VCL-202ENST00000372755 NOVA2Q9UNW9 492 aaKnown RBP12.4□□□□□ -0.43
VCL-202ENST00000372755 TJP3O95049 919 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 PDXDC2PQ6P474 469 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 C11orf57Q6ZUT1 292 aaPredicted RBP12.39□□□□□ -0.43
VCL-202ENST00000372755 CRLF3Q8IUI8 442 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 ACRBPQ8NEB7 543 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 ABCF3Q9NUQ8 709 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 PNMA6FA0A0J9YX94 578 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 ZMYND10O75800 440 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 IFNAR1P17181 557 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 IREB2P48200 963 aaKnown RBP12.39□□□□□ -0.43
VCL-202ENST00000372755 GOLGA8FQ08AF8 430 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 GOLGA8DPQ0D2H9 430 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 MAML1Q92585 1016 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 COA7Q96BR5 231 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 SERPINB2P05120 415 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 RPSAP08865 295 aaKnown RBP12.39□□□□□ -0.43
VCL-202ENST00000372755 PSMA2P25787 234 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 ADCK5Q3MIX3 580 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 SCG3Q8WXD2 468 aaKnown RBP12.39□□□□□ -0.43
VCL-202ENST00000372755 NDST4Q9H3R1 872 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 NDUFA10O95299 355 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 NR1D1P20393 614 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 JAK3P52333 1124 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 OSTNP61366 133 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 ARL6IP4Q66PJ3 421 aaKnown RBP12.39□□□□□ -0.43
VCL-202ENST00000372755 TRMT10CQ7L0Y3 403 aaKnown RBP12.39□□□□□ -0.43
VCL-202ENST00000372755 PLCG1P19174 1290 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 CA4P22748 312 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 THEM5Q8N1Q8 247 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms