RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 LOC285556D6RIA3 1793 aa12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 MYH4Q9Y623 1939 aa12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 KRT86O43790 486 aa12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 CYLC1P35663 651 aaPredicted RBP12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 AFMP43652 599 aa12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 STX17P56962 302 aa12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 ERVK-9P63128 1117 aa12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 CDK17Q00537 523 aa12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 SP3Q02447 781 aa12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 MEA1Q16626 185 aa12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 FAM110CQ1W6H9 321 aa12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 SLC35G1Q2M3R5 365 aa12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 WDR78Q5VTH9 848 aa12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 ZNF572Q7Z3I7 529 aaPredicted RBP12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 MB21D1Q8N884 522 aa12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 ZNF296Q8WUU4 475 aaPredicted RBP12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 THAP9Q9H5L6 903 aa12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 JMJD4Q9H9V9 463 aa12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 SUGCTQ9HAC7 445 aa12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 SLC38A10Q9HBR0 1119 aa12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 CAPN11Q9UMQ6 739 aa12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 ATXN2Q99700 1313 aaKnown RBP12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 PTPRFP10586 1907 aa12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 A0A0U1RQJ8 604 aa12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 hCG_1642624A0A1W2PR95 340 aa12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 CYTH3O43739 400 aa12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 PRLRP16471 622 aa12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 TAL1P17542 331 aaPredicted RBP12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 STAT3P40763 770 aa12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 LBX1P52954 281 aa12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 KCNB1Q14721 858 aa12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 CDC37Q16543 378 aaPredicted RBP12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 RRAGBQ5VZM2 374 aa12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 ARL6IP4Q66PJ3 421 aaKnown RBP12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 SNRNP48Q6IEG0 339 aaKnown RBP12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 PDXDC2PQ6P474 469 aa12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 TMTC3Q6ZXV5 915 aa12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 REPS2Q8NFH8 660 aa12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 OXER1Q8TDS5 423 aa12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 ATRIPQ8WXE1 791 aa12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 TNFRSF25Q93038 417 aa12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 EPSTI1Q96J88 318 aa12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 AGBL1Q96MI9 1066 aa12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 PIGSQ96S52 555 aa12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 CRACR2AQ9BSW2 395 aa12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 TSGA10Q9BZW7 698 aa12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 SPATC1LQ9H0A9 340 aa12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 MORF4L1Q9UBU8 362 aa12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 LUC7L2Q9Y383 392 aaKnown RBP12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 REXO2Q9Y3B8 237 aaKnown RBP12.67□□□□□ -0.38
TSPAN1-201ENST00000372003 LGALS16A8MUM7 142 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 GOLGA8KD6RF30 607 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 FKTNO75072 461 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 FDX1P10109 184 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 PPP1R2P41236 205 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 DNM2P50570 870 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 TTC38Q5R3I4 469 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 CCNI2Q6ZMN8 369 aaPredicted RBP12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 NCAPG2Q86XI2 1143 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 MMGT1Q8N4V1 131 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 FAM76AQ8TAV0 307 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 NELFBQ8WX92 580 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 PURBQ96QR8 312 aaKnown RBP12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 LZTS2Q9BRK4 669 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 MOV10L1Q9BXT6 1211 aaKnown RBP12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 PORCNQ9H237 461 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 RANBP17Q9H2T7 1088 aaKnown RBP12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 RIOX1Q9H6W3 641 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 HOMER2Q9NSB8 354 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 ZNHIT6Q9NWK9 470 aaKnown RBP12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 ZNF214Q9UL59 606 aaPredicted RBP12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 RIPK3Q9Y572 518 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 HSPA8P11142 646 aaKnown RBP12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 ALAS1P13196 640 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 GUCY2CP25092 1073 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 LONP1P36776 959 aaKnown RBP12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 CCT6AP40227 531 aaKnown RBP12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 CTCFP49711 727 aaPredicted RBP12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 GTF2A1P52655 376 aaPredicted RBP12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 CCNA1P78396 465 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 FUT2Q10981 343 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 PPFIA1Q13136 1202 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 PKN1Q16512 942 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 QRICH1Q2TAL8 776 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 USH1GQ495M9 461 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 FIGNQ5HY92 759 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 SWT1Q5T5J6 900 aaKnown RBP12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 NCAPH2Q6IBW4 605 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 TADA2BQ86TJ2 420 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 ZNF507Q8TCN5 953 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 CD99L2Q8TCZ2 262 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 RRP36Q96EU6 259 aaKnown RBP12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 TEX13BQ9BXU2 312 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 ARHGAP39Q9C0H5 1083 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 FAM184BQ9ULE4 1060 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 CCPG1Q9ULG6 757 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 JRKLQ9Y4A0 524 aa12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 V9GY48 417 aaPredicted RBP12.66□□□□□ -0.38
TSPAN1-201ENST00000372003 ZNF536O15090 1300 aa12.65□□□□□ -0.38
TSPAN1-201ENST00000372003 ZBTB5O15062 677 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms